72 |
0.02709 |
0.29 |
ct_530 |
fmt |
-6.32 |
0.201483 |
239 -- 246 |
80 -- 87 |
methionyl-tRNA formyltransferase |
|
_____________238______247\n_____________|________|\n5'-UAA...CAAUU________CUGUU...CGC-3'\n______________UGCGGCUA\n______________|:||||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
240 -- 246 |
80 -- 86 |
-12.3749 kcal/mol |
4.96164 kcal/mol |
1.09752 kcal/mol |
238 247@LB@ | |@LB@5'-UAA...CAAUU CUGUU...CGC-3'@LB@ UGCGGCUA@LB@ |:||||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -6.32 kcal/mol@LB@Hybridization Energy -12.3749 kcal/mol@LB@Unfolding Energy - mRNA 4.96164 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 239 -- 246@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 80 -- 86@LB@ |
76 |
0.02744 |
0.29 |
ct_510 |
secY |
-5.37 |
0.309530 |
200 -- 207 |
80 -- 87 |
preprotein translocase subunit SecY |
|
_____________199______208\n_____________|________|\n5'-GAU...AAGUU________CAUUG...UCC-3'\n______________UAUGGCUA\n______________||:|||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
201 -- 207 |
80 -- 86 |
-9.93483 kcal/mol |
3.46443 kcal/mol |
1.09752 kcal/mol |
199 208@LB@ | |@LB@5'-GAU...AAGUU CAUUG...UCC-3'@LB@ UAUGGCUA@LB@ ||:|||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -5.37 kcal/mol@LB@Hybridization Energy -9.93483 kcal/mol@LB@Unfolding Energy - mRNA 3.46443 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 200 -- 207@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 80 -- 86@LB@ |
86 |
0.03096 |
0.29 |
ct_221 |
yqfU |
-7.15 |
0.133289 |
38 -- 44 |
80 -- 86 |
|
|
_____________37______45\n_____________|_______|\n5'-AUA...GCUCA_______GAGCA...GUG-3'\n______________GCGGUUA\n______________:|||:||\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
38 -- 44 |
80 -- 86 |
-8.46136 kcal/mol |
0.243281 kcal/mol |
1.06449 kcal/mol |
37 45@LB@ | |@LB@5'-AUA...GCUCA GAGCA...GUG-3'@LB@ GCGGUUA@LB@ :|||:||@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -7.15 kcal/mol@LB@Hybridization Energy -8.46136 kcal/mol@LB@Unfolding Energy - mRNA 0.243281 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 38 -- 44@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 38 -- 44@LB@Position Seed - sRNA 80 -- 86@LB@ |
90 |
0.03275 |
0.2942 |
ct_332 |
pykF |
-4.34 |
0.468844 |
109 -- 116 |
80 -- 87 |
pyruvate kinase |
|
_____________108______117\n_____________|________|\n5'-UUU...GCGAU________CUAAA...GCC-3'\n______________UGCGGUUG\n______________|:|||:|:\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
110 -- 116 |
80 -- 86 |
-9.21836 kcal/mol |
3.78563 kcal/mol |
1.09752 kcal/mol |
108 117@LB@ | |@LB@5'-UUU...GCGAU CUAAA...GCC-3'@LB@ UGCGGUUG@LB@ |:|||:|:@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -4.34 kcal/mol@LB@Hybridization Energy -9.21836 kcal/mol@LB@Unfolding Energy - mRNA 3.78563 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 109 -- 116@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 110 -- 116@LB@Position Seed - sRNA 80 -- 86@LB@ |
94 |
0.03394 |
0.2959 |
ct_249 |
N/A |
-6.52 |
0.182571 |
223 -- 229 |
80 -- 86 |
|
|
_____________222_____230\n_____________|_______|\n5'-UUG...UGAUC_______UUGGG...CUG-3'\n______________AUGGCUG\n______________|:||||:\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
223 -- 229 |
80 -- 86 |
-8.72307 kcal/mol |
1.13798 kcal/mol |
1.06449 kcal/mol |
222 230@LB@ | |@LB@5'-UUG...UGAUC UUGGG...CUG-3'@LB@ AUGGCUG@LB@ |:||||:@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -6.52 kcal/mol@LB@Hybridization Energy -8.72307 kcal/mol@LB@Unfolding Energy - mRNA 1.13798 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 223 -- 229@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 223 -- 229@LB@Position Seed - sRNA 80 -- 86@LB@ |
97 |
0.03496 |
0.2959 |
ct_539 |
trxA |
-6.38 |
0.195495 |
87 -- 94 |
80 -- 87 |
thioredoxin |
|
_____________86_______95\n_____________|________|\n5'-AUG...GAGGU________ACUGG...UGC-3'\n______________UAUGGCUA\n______________||:|||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
88 -- 94 |
80 -- 86 |
-10.4005 kcal/mol |
2.9242 kcal/mol |
1.09752 kcal/mol |
86 95@LB@ | |@LB@5'-AUG...GAGGU ACUGG...UGC-3'@LB@ UAUGGCUA@LB@ ||:|||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -6.38 kcal/mol@LB@Hybridization Energy -10.4005 kcal/mol@LB@Unfolding Energy - mRNA 2.9242 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 87 -- 94@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 80 -- 86@LB@ |
98 |
0.03528 |
0.2959 |
ct_676 |
N/A |
-6.99 |
0.144558 |
38 -- 44 |
80 -- 86 |
protein-arginine kinase activator protein |
|
_____________37______45\n_____________|_______|\n5'-GGG...GCUCA_______GAGCA...GUU-3'\n______________GCGGUUA\n______________:|||:||\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
38 -- 44 |
80 -- 86 |
-8.44953 kcal/mol |
0.39201 kcal/mol |
1.06449 kcal/mol |
37 45@LB@ | |@LB@5'-GGG...GCUCA GAGCA...GUU-3'@LB@ GCGGUUA@LB@ :|||:||@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -6.99 kcal/mol@LB@Hybridization Energy -8.44953 kcal/mol@LB@Unfolding Energy - mRNA 0.39201 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 38 -- 44@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 38 -- 44@LB@Position Seed - sRNA 80 -- 86@LB@ |
101 |
0.03758 |
0.3036 |
ct_457 |
N/A |
-2.86 |
0.734073 |
54 -- 60 |
80 -- 86 |
transcriptional regulator |
|
_____________53______61\n_____________|_______|\n5'-GGA...GUAAG_______GGUUA...UCU-3'\n______________AUGGUUG\n______________|:||:|:\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
54 -- 60 |
80 -- 86 |
-6.17108 kcal/mol |
2.2465 kcal/mol |
1.06449 kcal/mol |
53 61@LB@ | |@LB@5'-GGA...GUAAG GGUUA...UCU-3'@LB@ AUGGUUG@LB@ |:||:|:@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -2.86 kcal/mol@LB@Hybridization Energy -6.17108 kcal/mol@LB@Unfolding Energy - mRNA 2.2465 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 54 -- 60@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 54 -- 60@LB@Position Seed - sRNA 80 -- 86@LB@ |
105 |
0.03879 |
0.3036 |
ct_546 |
N/A |
-8.76 |
0.056849 |
221 -- 228 |
80 -- 87 |
contains leader (17) peptide |
|
_____________220______229\n_____________|________|\n5'-CGC...UUUAU________UUUUU...ACG-3'\n______________UGCGGCUA\n______________|:||||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
222 -- 228 |
80 -- 86 |
-12.4581 kcal/mol |
2.60487 kcal/mol |
1.09752 kcal/mol |
220 229@LB@ | |@LB@5'-CGC...UUUAU UUUUU...ACG-3'@LB@ UGCGGCUA@LB@ |:||||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -8.76 kcal/mol@LB@Hybridization Energy -12.4581 kcal/mol@LB@Unfolding Energy - mRNA 2.60487 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 221 -- 228@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 80 -- 86@LB@ |
113 |
0.04597 |
0.3262 |
ct_841 |
ftsH |
-6.80 |
0.159029 |
200 -- 207 |
80 -- 87 |
ATP-dependent zinc metalloprotease FtsH |
|
_____________199______208\n_____________|________|\n5'-GGU...AGUUU________AAGAU...UUC-3'\n______________UAUGGCUA\n______________||:|||||\n______________AUGCCGAU\n3'-UUU...CCUCU________UGAGG...GAA-5'\n_____________|________|\n_____________88_______79\n |
200 -- 206 |
81 -- 87 |
-10.6438 kcal/mol |
2.74436 kcal/mol |
1.09752 kcal/mol |
199 208@LB@ | |@LB@5'-GGU...AGUUU AAGAU...UUC-3'@LB@ UAUGGCUA@LB@ ||:|||||@LB@ AUGCCGAU@LB@3'-UUU...CCUCU UGAGG...GAA-5'@LB@ | |@LB@ 88 79@LB@@LB@@LB@Energy -6.80 kcal/mol@LB@Hybridization Energy -10.6438 kcal/mol@LB@Unfolding Energy - mRNA 2.74436 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 200 -- 207@LB@Position - sRNA 80 -- 87@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 81 -- 87@LB@ |