96 |
0.03475 |
0.2959 |
ct_548 |
N/A |
-8.10 |
0.081484 |
276 -- 282 |
54 -- 60 |
|
|
_____________275_____283\n_____________|_______|\n5'-ACA...UGCUC_______ACUAU...AAU-3'\n______________UCCCCCC\n______________|||||||\n______________AGGGGGG\n3'-UUU...ACUGA_______ACACA...GAA-5'\n_____________|_______|\n_____________61______53\n |
276 -- 282 |
54 -- 60 |
-15.7273 kcal/mol |
1.19056 kcal/mol |
6.44182 kcal/mol |
275 283@LB@ | |@LB@5'-ACA...UGCUC ACUAU...AAU-3'@LB@ UCCCCCC@LB@ |||||||@LB@ AGGGGGG@LB@3'-UUU...ACUGA ACACA...GAA-5'@LB@ | |@LB@ 61 53@LB@@LB@@LB@Energy -8.10 kcal/mol@LB@Hybridization Energy -15.7273 kcal/mol@LB@Unfolding Energy - mRNA 1.19056 kcal/mol@LB@Unfolding Energy - sRNA 6.44182 kcal/mol@LB@@LB@Position - mRNA 276 -- 282@LB@Position - sRNA 54 -- 60@LB@Position Seed - mRNA 276 -- 282@LB@Position Seed - sRNA 54 -- 60@LB@ |
115 |
0.04794 |
0.3262 |
ct_778 |
priA |
-6.05 |
0.227860 |
46 -- 52 |
54 -- 60 |
primosomal protein N' |
|
_____________45______53\n_____________|_______|\n5'-CGC...GUCAU_______AUCCU...AAA-3'\n______________UCCCCUC\n______________|||||:|\n______________AGGGGGG\n3'-UUU...ACUGA_______ACACA...GAA-5'\n_____________|_______|\n_____________61______53\n |
46 -- 52 |
54 -- 60 |
-12.5948 kcal/mol |
0.0982726 kcal/mol |
6.44182 kcal/mol |
45 53@LB@ | |@LB@5'-CGC...GUCAU AUCCU...AAA-3'@LB@ UCCCCUC@LB@ |||||:|@LB@ AGGGGGG@LB@3'-UUU...ACUGA ACACA...GAA-5'@LB@ | |@LB@ 61 53@LB@@LB@@LB@Energy -6.05 kcal/mol@LB@Hybridization Energy -12.5948 kcal/mol@LB@Unfolding Energy - mRNA 0.0982726 kcal/mol@LB@Unfolding Energy - sRNA 6.44182 kcal/mol@LB@@LB@Position - mRNA 46 -- 52@LB@Position - sRNA 54 -- 60@LB@Position Seed - mRNA 46 -- 52@LB@Position Seed - sRNA 54 -- 60@LB@ |
191 |
0.08461 |
0.363 |
ct_112 |
pepF |
-2.97 |
0.715117 |
121 -- 127 |
54 -- 60 |
oligoendopeptidase F |
|
_____________120_____128\n_____________|_______|\n5'-UCU...UCUCU_______ACUGG...AAG-3'\n______________UCCCCUU\n______________|||||::\n______________AGGGGGG\n3'-UUU...ACUGA_______ACACA...GAA-5'\n_____________|_______|\n_____________61______53\n |
121 -- 127 |
54 -- 60 |
-10.8708 kcal/mol |
1.46061 kcal/mol |
6.44182 kcal/mol |
120 128@LB@ | |@LB@5'-UCU...UCUCU ACUGG...AAG-3'@LB@ UCCCCUU@LB@ |||||::@LB@ AGGGGGG@LB@3'-UUU...ACUGA ACACA...GAA-5'@LB@ | |@LB@ 61 53@LB@@LB@@LB@Energy -2.97 kcal/mol@LB@Hybridization Energy -10.8708 kcal/mol@LB@Unfolding Energy - mRNA 1.46061 kcal/mol@LB@Unfolding Energy - sRNA 6.44182 kcal/mol@LB@@LB@Position - mRNA 121 -- 127@LB@Position - sRNA 54 -- 60@LB@Position Seed - mRNA 121 -- 127@LB@Position Seed - sRNA 54 -- 60@LB@ |
44 |
0.01666 |
0.29 |
ct_438 |
rs7 |
-6.33 |
0.200160 |
214 -- 223 |
79 -- 88 |
30S ribosomal protein S7 |
|
_____________213________224\n_____________|__________|\n5'-GCA...ACGAC__________GAAGA...ACG-3'\n______________AUGCGGCUGA\n______________||:|||||:|\n______________UAUGCCGAUU\n3'-UUU...GCCUC__________GAGGU...GAA-5'\n_____________|__________|\n_____________89_________78\n |
217 -- 223 |
79 -- 85 |
-13.0034 kcal/mol |
5.57631 kcal/mol |
1.09753 kcal/mol |
213 224@LB@ | |@LB@5'-GCA...ACGAC GAAGA...ACG-3'@LB@ AUGCGGCUGA@LB@ ||:|||||:|@LB@ UAUGCCGAUU@LB@3'-UUU...GCCUC GAGGU...GAA-5'@LB@ | |@LB@ 89 78@LB@@LB@@LB@Energy -6.33 kcal/mol@LB@Hybridization Energy -13.0034 kcal/mol@LB@Unfolding Energy - mRNA 5.57631 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 214 -- 223@LB@Position - sRNA 79 -- 88@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 79 -- 85@LB@ |
66 |
0.02511 |
0.29 |
ct_461 |
N/A |
-5.44 |
0.300406 |
64 -- 70 |
79 -- 85 |
UDP-2 3-diacylglucosamine pyrophosphohydrolase |
|
_____________63______71\n_____________|_______|\n5'-ACA...UAAAU_______AGUUU...UGA-3'\n______________UGGCUAA\n______________:||||||\n______________GCCGAUU\n3'-UUU...UCUAU_______GAGGU...GAA-5'\n_____________|_______|\n_____________86______78\n |
64 -- 70 |
79 -- 85 |
-7.83174 kcal/mol |
1.29235 kcal/mol |
1.09751 kcal/mol |
63 71@LB@ | |@LB@5'-ACA...UAAAU AGUUU...UGA-3'@LB@ UGGCUAA@LB@ :||||||@LB@ GCCGAUU@LB@3'-UUU...UCUAU GAGGU...GAA-5'@LB@ | |@LB@ 86 78@LB@@LB@@LB@Energy -5.44 kcal/mol@LB@Hybridization Energy -7.83174 kcal/mol@LB@Unfolding Energy - mRNA 1.29235 kcal/mol@LB@Unfolding Energy - sRNA 1.09751 kcal/mol@LB@@LB@Position - mRNA 64 -- 70@LB@Position - sRNA 79 -- 85@LB@Position Seed - mRNA 64 -- 70@LB@Position Seed - sRNA 79 -- 85@LB@ |
79 |
0.0288 |
0.29 |
ct_431 |
clpP_1 |
-3.71 |
0.580570 |
128 -- 134 |
79 -- 85 |
ATP-dependent Clp protease proteolytic subunit |
|
_____________127_____135\n_____________|_______|\n5'-GAA...ACGUG_______UUUAU...AAA-3'\n______________UGGCUGA\n______________:||||:|\n______________GCCGAUU\n3'-UUU...UCUAU_______GAGGU...GAA-5'\n_____________|_______|\n_____________86______78\n |
128 -- 134 |
79 -- 85 |
-7.88567 kcal/mol |
3.08 kcal/mol |
1.09751 kcal/mol |
127 135@LB@ | |@LB@5'-GAA...ACGUG UUUAU...AAA-3'@LB@ UGGCUGA@LB@ :||||:|@LB@ GCCGAUU@LB@3'-UUU...UCUAU GAGGU...GAA-5'@LB@ | |@LB@ 86 78@LB@@LB@@LB@Energy -3.71 kcal/mol@LB@Hybridization Energy -7.88567 kcal/mol@LB@Unfolding Energy - mRNA 3.08 kcal/mol@LB@Unfolding Energy - sRNA 1.09751 kcal/mol@LB@@LB@Position - mRNA 128 -- 134@LB@Position - sRNA 79 -- 85@LB@Position Seed - mRNA 128 -- 134@LB@Position Seed - sRNA 79 -- 85@LB@ |
87 |
0.03104 |
0.29 |
ct_437 |
fusA |
-5.85 |
0.250219 |
118 -- 125 |
79 -- 86 |
elongation factor G |
|
_____________117______126\n_____________|________|\n5'-AUC...AUCGC________AGCAA...UCU-3'\n______________AUGGCUGA\n______________|:||||:|\n______________UGCCGAUU\n3'-UUU...CUCUA________GAGGU...GAA-5'\n_____________|________|\n_____________87_______78\n |
119 -- 125 |
79 -- 85 |
-8.84241 kcal/mol |
1.89322 kcal/mol |
1.09752 kcal/mol |
117 126@LB@ | |@LB@5'-AUC...AUCGC AGCAA...UCU-3'@LB@ AUGGCUGA@LB@ |:||||:|@LB@ UGCCGAUU@LB@3'-UUU...CUCUA GAGGU...GAA-5'@LB@ | |@LB@ 87 78@LB@@LB@@LB@Energy -5.85 kcal/mol@LB@Hybridization Energy -8.84241 kcal/mol@LB@Unfolding Energy - mRNA 1.89322 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 118 -- 125@LB@Position - sRNA 79 -- 86@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 79 -- 85@LB@ |
114 |
0.04665 |
0.3262 |
ct_848 |
N/A |
-8.83 |
0.054442 |
279 -- 286 |
79 -- 86 |
|
|
_____________278______287\n_____________|________|\n5'-CAA...CUGCA________UGAGA...CAC-3'\n______________ACGGCUGA\n______________||||||:|\n______________UGCCGAUU\n3'-UUU...CUCUA________GAGGU...GAA-5'\n_____________|________|\n_____________87_______78\n |
280 -- 286 |
79 -- 85 |
-11.4013 kcal/mol |
1.46996 kcal/mol |
1.09752 kcal/mol |
278 287@LB@ | |@LB@5'-CAA...CUGCA UGAGA...CAC-3'@LB@ ACGGCUGA@LB@ ||||||:|@LB@ UGCCGAUU@LB@3'-UUU...CUCUA GAGGU...GAA-5'@LB@ | |@LB@ 87 78@LB@@LB@@LB@Energy -8.83 kcal/mol@LB@Hybridization Energy -11.4013 kcal/mol@LB@Unfolding Energy - mRNA 1.46996 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 279 -- 286@LB@Position - sRNA 79 -- 86@LB@Position Seed - mRNA 280 -- 286@LB@Position Seed - sRNA 79 -- 85@LB@ |
179 |
0.07718 |
0.3544 |
ct_781 |
lysS |
-5.99 |
0.234962 |
194 -- 201 |
79 -- 86 |
lysine--tRNA ligase |
|
_____________193______202\n_____________|________|\n5'-AAA...AAAGG________UGUCU...AUC-3'\n______________ACGGUUGA\n______________||||:|:|\n______________UGCCGAUU\n3'-UUU...CUCUA________GAGGU...GAA-5'\n_____________|________|\n_____________87_______78\n |
195 -- 201 |
79 -- 85 |
-9.06205 kcal/mol |
1.97593 kcal/mol |
1.09752 kcal/mol |
193 202@LB@ | |@LB@5'-AAA...AAAGG UGUCU...AUC-3'@LB@ ACGGUUGA@LB@ ||||:|:|@LB@ UGCCGAUU@LB@3'-UUU...CUCUA GAGGU...GAA-5'@LB@ | |@LB@ 87 78@LB@@LB@@LB@Energy -5.99 kcal/mol@LB@Hybridization Energy -9.06205 kcal/mol@LB@Unfolding Energy - mRNA 1.97593 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 194 -- 201@LB@Position - sRNA 79 -- 86@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 79 -- 85@LB@ |
186 |
0.08332 |
0.363 |
ct_811 |
plsX |
-5.83 |
0.252304 |
163 -- 171 |
79 -- 87 |
phosphate acyltransferase |
|
_____________162_______172\n_____________|_________|\n5'-GGC...GUUAU_________GAAGU...AAC-3'\n______________UACGGUUGA\n______________|||||:|:|\n______________AUGCCGAUU\n3'-UUU...CCUCU_________GAGGU...GAA-5'\n_____________|_________|\n_____________88________78\n |
165 -- 171 |
79 -- 85 |
-10.158 kcal/mol |
3.22704 kcal/mol |
1.09752 kcal/mol |
162 172@LB@ | |@LB@5'-GGC...GUUAU GAAGU...AAC-3'@LB@ UACGGUUGA@LB@ |||||:|:|@LB@ AUGCCGAUU@LB@3'-UUU...CCUCU GAGGU...GAA-5'@LB@ | |@LB@ 88 78@LB@@LB@@LB@Energy -5.83 kcal/mol@LB@Hybridization Energy -10.158 kcal/mol@LB@Unfolding Energy - mRNA 3.22704 kcal/mol@LB@Unfolding Energy - sRNA 1.09752 kcal/mol@LB@@LB@Position - mRNA 163 -- 171@LB@Position - sRNA 79 -- 87@LB@Position Seed - mRNA 165 -- 171@LB@Position Seed - sRNA 79 -- 85@LB@ |