| 59 |
0.004284 |
0.2442 |
b0094 |
ftsA |
-10.23 |
0.109208 |
176 -- 218 |
1 -- 63 |
ATP-binding cell division FtsK recruitment protein |
|
_____________175________________________________________________________________219\n_____________|__________________________________________________________________|\n5'-AAU...GCAAC__________________CA___AG___________________________UCA_____ACG___AGAAA...UCA-3'\n______________AAAAUCAG_______GCA__GGC__AACA________________ACAAUGA___AGGCG___GAC\n______________||||||||_______|||__|||__||||________________|||||:|___||||:___:||\n______________UUUUAGUC_______CGU__CCG__UUGU________________UGUUAUU___UCCGU___UUG\n3'-UUU...CAACC________ACCGUUA___UA___GG____CUUUUAUUUUAGACAC_______________AUA___-5'\n_____________|_________________________________________________________________|\n_____________64________________________________________________________________1\n |
198 -- 204 |
12 -- 18 |
-27.1283 kcal/mol |
4.74085 kcal/mol |
12.1605 kcal/mol |
175 219@LB@ | |@LB@5'-AAU...GCAAC CA AG UCA ACG AGAAA...UCA-3'@LB@ AAAAUCAG GCA GGC AACA ACAAUGA AGGCG GAC@LB@ |||||||| ||| ||| |||| |||||:| ||||: :||@LB@ UUUUAGUC CGU CCG UUGU UGUUAUU UCCGU UUG@LB@3'-UUU...CAACC ACCGUUA UA GG CUUUUAUUUUAGACAC AUA -5'@LB@ | |@LB@ 64 1@LB@@LB@@LB@Energy -10.23 kcal/mol@LB@Hybridization Energy -27.1283 kcal/mol@LB@Unfolding Energy - mRNA 4.74085 kcal/mol@LB@Unfolding Energy - sRNA 12.1605 kcal/mol@LB@@LB@Position - mRNA 176 -- 218@LB@Position - sRNA 1 -- 63@LB@Position Seed - mRNA 198 -- 204@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 25 |
0.001369 |
0.1841 |
b2599 |
pheA |
-10.09 |
0.116571 |
180 -- 205 |
1 -- 20 |
chorismate mutase and prephenate dehydratase P-protein |
|
_____________179________________________206\n_____________|__________________________|\n5'-UGA...UUUAU______CAA_______ACAC______AUCGG...UCG-3'\n______________UGAUAA___AAAGGCA____UAUGAC\n______________|||:||___|||||||____|||:||\n______________ACUGUU___UUUCCGU____AUAUUG\n3'-UUU...UAGAC______A___________________-5'\n_____________|_________________________|\n_____________21________________________1\n |
189 -- 195 |
7 -- 13 |
-16.49 kcal/mol |
2.17136 kcal/mol |
4.22784 kcal/mol |
179 206@LB@ | |@LB@5'-UGA...UUUAU CAA ACAC AUCGG...UCG-3'@LB@ UGAUAA AAAGGCA UAUGAC@LB@ |||:|| ||||||| |||:||@LB@ ACUGUU UUUCCGU AUAUUG@LB@3'-UUU...UAGAC A -5'@LB@ | |@LB@ 21 1@LB@@LB@@LB@Energy -10.09 kcal/mol@LB@Hybridization Energy -16.49 kcal/mol@LB@Unfolding Energy - mRNA 2.17136 kcal/mol@LB@Unfolding Energy - sRNA 4.22784 kcal/mol@LB@@LB@Position - mRNA 180 -- 205@LB@Position - sRNA 1 -- 20@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 7 -- 13@LB@ |
| 102 |
0.009578 |
0.3118 |
b1247 |
oppF |
-10.09 |
0.116865 |
264 -- 290 |
39 -- 63 |
oligopeptide ABC transporter ATPase |
|
_____________263__________________________291\n_____________|____________________________|\n5'-GCG...ACUUU______AA__A______A__________UGGCA...CGC-3'\n______________GAAAUC__AG_UGGCAA__CAGUGGUUC\n______________:|||||__||_||||||__||:|||::|\n______________UUUUAG__UC_ACCGUU__GUUACCGGG\n3'-UUU...CAACC_________________AC_________UUGUC...UUG-5'\n_____________|____________________________|\n_____________64___________________________38\n |
284 -- 290 |
39 -- 45 |
-23.4236 kcal/mol |
6.69228 kcal/mol |
6.64584 kcal/mol |
263 291@LB@ | |@LB@5'-GCG...ACUUU AA A A UGGCA...CGC-3'@LB@ GAAAUC AG UGGCAA CAGUGGUUC@LB@ :||||| || |||||| ||:|||::|@LB@ UUUUAG UC ACCGUU GUUACCGGG@LB@3'-UUU...CAACC AC UUGUC...UUG-5'@LB@ | |@LB@ 64 38@LB@@LB@@LB@Energy -10.09 kcal/mol@LB@Hybridization Energy -23.4236 kcal/mol@LB@Unfolding Energy - mRNA 6.69228 kcal/mol@LB@Unfolding Energy - sRNA 6.64584 kcal/mol@LB@@LB@Position - mRNA 264 -- 290@LB@Position - sRNA 39 -- 63@LB@Position Seed - mRNA 284 -- 290@LB@Position Seed - sRNA 39 -- 45@LB@ |
| 57 |
0.004077 |
0.237 |
b4198 |
ulaF |
-9.90 |
0.127727 |
21 -- 37 |
42 -- 55 |
L-ribulose 5-phosphate 4-epimerase |
|
_____________20________________38\n_____________|_________________|\n5'-GUC...CCGUU_____AAG_________AUUUC...GCG-3'\n______________UGGCG___GUGUAGUGG\n______________||||:___:||:|:|||\n______________ACCGU___UACGUUACC\n3'-UUU...UAGUC_________________GGGUU...UUG-5'\n_____________|_________________|\n_____________56________________41\n |
31 -- 37 |
42 -- 48 |
-17.0201 kcal/mol |
3.6214 kcal/mol |
3.50097 kcal/mol |
20 38@LB@ | |@LB@5'-GUC...CCGUU AAG AUUUC...GCG-3'@LB@ UGGCG GUGUAGUGG@LB@ ||||: :||:|:|||@LB@ ACCGU UACGUUACC@LB@3'-UUU...UAGUC GGGUU...UUG-5'@LB@ | |@LB@ 56 41@LB@@LB@@LB@Energy -9.90 kcal/mol@LB@Hybridization Energy -17.0201 kcal/mol@LB@Unfolding Energy - mRNA 3.6214 kcal/mol@LB@Unfolding Energy - sRNA 3.50097 kcal/mol@LB@@LB@Position - mRNA 21 -- 37@LB@Position - sRNA 42 -- 55@LB@Position Seed - mRNA 31 -- 37@LB@Position Seed - sRNA 42 -- 48@LB@ |
| 65 |
0.005052 |
0.2614 |
b0451 |
amtB |
-9.90 |
0.127883 |
170 -- 220 |
11 -- 61 |
ammonium transporter |
|
_____________169____________________________________________________221\n_____________|______________________________________________________|\n5'-CCA...GCUGU____UC_____CACA____CA__AA_______________AUA_C_________AACUG...CGU-3'\n______________AAUC__UGGCA____GCAA__GG__CGA___AAAAUGAAG___G_GACGAUAAA\n______________||||__|||||____||||__||__|:|___|||||:||:___|_|||:|||||\n______________UUAG__ACCGU____CGUU__CC__GUU___UUUUAUUUU___C_CUGUUAUUU\n3'-UUU...ACCUU____UC_____UA______A___GG___GUC_________AGA_A_________CCGUA...UUG-5'\n_____________|______________________________________________________|\n_____________62_____________________________________________________10\n |
214 -- 220 |
11 -- 17 |
-30.4323 kcal/mol |
9.41224 kcal/mol |
11.1248 kcal/mol |
169 221@LB@ | |@LB@5'-CCA...GCUGU UC CACA CA AA AUA C AACUG...CGU-3'@LB@ AAUC UGGCA GCAA GG CGA AAAAUGAAG G GACGAUAAA@LB@ |||| ||||| |||| || |:| |||||:||: | |||:|||||@LB@ UUAG ACCGU CGUU CC GUU UUUUAUUUU C CUGUUAUUU@LB@3'-UUU...ACCUU UC UA A GG GUC AGA A CCGUA...UUG-5'@LB@ | |@LB@ 62 10@LB@@LB@@LB@Energy -9.90 kcal/mol@LB@Hybridization Energy -30.4323 kcal/mol@LB@Unfolding Energy - mRNA 9.41224 kcal/mol@LB@Unfolding Energy - sRNA 11.1248 kcal/mol@LB@@LB@Position - mRNA 170 -- 220@LB@Position - sRNA 11 -- 61@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 11 -- 17@LB@ |
| 187 |
0.02306 |
0.4145 |
b1854 |
pykA |
-9.88 |
0.128920 |
243 -- 268 |
12 -- 43 |
pyruvate kinase II |
|
_____________242______________________________269\n_____________|________________________________|\n5'-GAA...CGUUA_________AC____________C________UCUUG...ACG-3'\n______________GGCCCAGCA_______AGAUC_G_GAUAAUAA\n______________||||||:||_______|:|||_|_||:|||||\n______________CCGGGUUGU_______UUUAG_C_CUGUUAUU\n3'-UUU...CGUUA_________CUUUUAU_____A_A________UCCGU...UUG-5'\n_____________|________________________________|\n_____________44_______________________________11\n |
262 -- 268 |
12 -- 18 |
-24.7448 kcal/mol |
4.16838 kcal/mol |
10.6985 kcal/mol |
242 269@LB@ | |@LB@5'-GAA...CGUUA AC C UCUUG...ACG-3'@LB@ GGCCCAGCA AGAUC G GAUAAUAA@LB@ ||||||:|| |:||| | ||:|||||@LB@ CCGGGUUGU UUUAG C CUGUUAUU@LB@3'-UUU...CGUUA CUUUUAU A A UCCGU...UUG-5'@LB@ | |@LB@ 44 11@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -24.7448 kcal/mol@LB@Unfolding Energy - mRNA 4.16838 kcal/mol@LB@Unfolding Energy - sRNA 10.6985 kcal/mol@LB@@LB@Position - mRNA 243 -- 268@LB@Position - sRNA 12 -- 43@LB@Position Seed - mRNA 262 -- 268@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 139 |
0.0159 |
0.3828 |
b2108 |
yehA |
-9.84 |
0.131393 |
50 -- 60 |
55 -- 65 |
putative fimbrial-like adhesin protein |
|
_____________49__________61\n_____________|___________|\n5'-GUU...GGCCA___________UAUUU...UUG-3'\n______________GGGAAGUCAGU\n______________||:||:|||||\n______________CCUUUUAGUCA\n3'-UUU...UACAA___________CCGUU...UUG-5'\n_____________|___________|\n_____________66__________54\n |
54 -- 60 |
55 -- 61 |
-13.8721 kcal/mol |
3.08221 kcal/mol |
0.952476 kcal/mol |
49 61@LB@ | |@LB@5'-GUU...GGCCA UAUUU...UUG-3'@LB@ GGGAAGUCAGU@LB@ ||:||:|||||@LB@ CCUUUUAGUCA@LB@3'-UUU...UACAA CCGUU...UUG-5'@LB@ | |@LB@ 66 54@LB@@LB@@LB@Energy -9.84 kcal/mol@LB@Hybridization Energy -13.8721 kcal/mol@LB@Unfolding Energy - mRNA 3.08221 kcal/mol@LB@Unfolding Energy - sRNA 0.952476 kcal/mol@LB@@LB@Position - mRNA 50 -- 60@LB@Position - sRNA 55 -- 65@LB@Position Seed - mRNA 54 -- 60@LB@Position Seed - sRNA 55 -- 61@LB@ |
| 31 |
0.001906 |
0.2067 |
b0198 |
metI |
-9.82 |
0.132421 |
237 -- 257 |
48 -- 68 |
DL-methionine transporter subunit |
|
_____________236____________________258\n_____________|______________________|\n5'-UCA...GUGGC__A__________C________ACCUU...CGG-3'\n______________GU_UGGGAAA_CG_UGGCAAUG\n______________||_|||:|||_|:_||||||||\n______________CA_ACCUUUU_GU_ACCGUUAC\n3'-UUU...AUAUA__________A__C________GUUAC...UUG-5'\n_____________|______________________|\n_____________69_____________________47\n |
251 -- 257 |
48 -- 54 |
-20.2902 kcal/mol |
6.26471 kcal/mol |
4.20468 kcal/mol |
236 258@LB@ | |@LB@5'-UCA...GUGGC A C ACCUU...CGG-3'@LB@ GU UGGGAAA CG UGGCAAUG@LB@ || |||:||| |: ||||||||@LB@ CA ACCUUUU GU ACCGUUAC@LB@3'-UUU...AUAUA A C GUUAC...UUG-5'@LB@ | |@LB@ 69 47@LB@@LB@@LB@Energy -9.82 kcal/mol@LB@Hybridization Energy -20.2902 kcal/mol@LB@Unfolding Energy - mRNA 6.26471 kcal/mol@LB@Unfolding Energy - sRNA 4.20468 kcal/mol@LB@@LB@Position - mRNA 237 -- 257@LB@Position - sRNA 48 -- 68@LB@Position Seed - mRNA 251 -- 257@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 10 |
0.0004066 |
0.1262 |
b3429 |
glgA |
-9.74 |
0.137242 |
173 -- 185 |
51 -- 64 |
glycogen synthase |
|
_____________172____________186\n_____________|______________|\n5'-GUA...GCUAC______________UAAAC...ACG-3'\n______________GGAAGUUAG_GGCA\n______________|:||:|:||_||||\n______________CUUUUAGUC_CCGU\n3'-UUU...ACAAC_________A____UACGU...UUG-5'\n_____________|______________|\n_____________65_____________50\n |
175 -- 181 |
56 -- 62 |
-15.3924 kcal/mol |
2.76007 kcal/mol |
2.8882 kcal/mol |
172 186@LB@ | |@LB@5'-GUA...GCUAC UAAAC...ACG-3'@LB@ GGAAGUUAG GGCA@LB@ |:||:|:|| ||||@LB@ CUUUUAGUC CCGU@LB@3'-UUU...ACAAC A UACGU...UUG-5'@LB@ | |@LB@ 65 50@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -15.3924 kcal/mol@LB@Unfolding Energy - mRNA 2.76007 kcal/mol@LB@Unfolding Energy - sRNA 2.8882 kcal/mol@LB@@LB@Position - mRNA 173 -- 185@LB@Position - sRNA 51 -- 64@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 56 -- 62@LB@ |
| 104 |
0.009649 |
0.3118 |
b0910 |
cmk |
-9.70 |
0.140357 |
282 -- 294 |
41 -- 53 |
cytidylate kinase |
|
_____________281___________295\n_____________|_____________|\n5'-CCG...CGGAA___U_________AUCUGC-3'\n______________GCG_UGCAAUGGC\n______________||:_|||||||||\n______________CGU_ACGUUACCG\n3'-UUU...GUCAC___U_________GGUUG...UUG-5'\n_____________|_____________|\n_____________54____________40\n |
288 -- 294 |
41 -- 47 |
-19.191 kcal/mol |
5.61932 kcal/mol |
3.8759 kcal/mol |
281 295@LB@ | |@LB@5'-CCG...CGGAA U AUCUGC-3'@LB@ GCG UGCAAUGGC@LB@ ||: |||||||||@LB@ CGU ACGUUACCG@LB@3'-UUU...GUCAC U GGUUG...UUG-5'@LB@ | |@LB@ 54 40@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -19.191 kcal/mol@LB@Unfolding Energy - mRNA 5.61932 kcal/mol@LB@Unfolding Energy - sRNA 3.8759 kcal/mol@LB@@LB@Position - mRNA 282 -- 294@LB@Position - sRNA 41 -- 53@LB@Position Seed - mRNA 288 -- 294@LB@Position Seed - sRNA 41 -- 47@LB@ |
