17 |
5.719e-05 |
0.01183 |
b3675 |
yidG |
-12.05 |
0.010096 |
82 -- 130 |
1 -- 56 |
inner membrane protein |
|
_____________81_____________________________________________________________131\n_____________|______________________________________________________________|\n5'-CGC...UUGCG_________CAAU_A_____CGAUGC__________GG________________________ACCAA...CGU-3'\n______________CUGGUUACG____G_AAAAG______GUCUGAAAGA___________ACCU____GCCCUAC\n______________|:|:|||||____|_|||||______||||||||||___________||||____:||||||\n______________GGCUAAUGC____C_UUUUC______CAGACUUUCU___________UGGA____UGGGAUG\n3'-AUU...GUUUA_________ACUU_A_____________________AUCUUGUAGAA____GACA_______-5'\n_____________|_____________________________________________________________|\n_____________57____________________________________________________________1\n |
124 -- 130 |
1 -- 7 |
-38.348 kcal/mol |
13.6157 kcal/mol |
12.7022 kcal/mol |
81 131@LB@ | |@LB@5'-CGC...UUGCG CAAU A CGAUGC GG ACCAA...CGU-3'@LB@ CUGGUUACG G AAAAG GUCUGAAAGA ACCU GCCCUAC@LB@ |:|:||||| | ||||| |||||||||| |||| :||||||@LB@ GGCUAAUGC C UUUUC CAGACUUUCU UGGA UGGGAUG@LB@3'-AUU...GUUUA ACUU A AUCUUGUAGAA GACA -5'@LB@ | |@LB@ 57 1@LB@@LB@@LB@Energy -12.05 kcal/mol@LB@Hybridization Energy -38.348 kcal/mol@LB@Unfolding Energy - mRNA 13.6157 kcal/mol@LB@Unfolding Energy - sRNA 12.7022 kcal/mol@LB@@LB@Position - mRNA 82 -- 130@LB@Position - sRNA 1 -- 56@LB@Position Seed - mRNA 124 -- 130@LB@Position Seed - sRNA 1 -- 7@LB@ |
41 |
0.000458 |
0.03766 |
b3679 |
yidK |
-16.91 |
0.000078 |
119 -- 159 |
1 -- 60 |
putative transporter |
|
_____________118__________________________________________________________160\n_____________|____________________________________________________________|\n5'-UUU...UUUAA________C_____________________CCCGAC________________________AUUCA...AAG-3'\n______________GAAUCUGA_UGC______________CUGA________GCAUUUUACCUCU___CCCUAU\n______________:||||:||_|:|______________||||________:|||:||||||||___|||||:\n______________UUUAGGCU_AUG______________GACU________UGUAGAAUGGAGA___GGGAUG\n3'-AUU...GUCGG________A___CACUUCAUUUUCCA____UUCUAUCU_____________CAU______-5'\n_____________|___________________________________________________________|\n_____________61__________________________________________________________1\n |
147 -- 153 |
10 -- 16 |
-34.139 kcal/mol |
4.55251 kcal/mol |
12.7042 kcal/mol |
118 160@LB@ | |@LB@5'-UUU...UUUAA C CCCGAC AUUCA...AAG-3'@LB@ GAAUCUGA UGC CUGA GCAUUUUACCUCU CCCUAU@LB@ :||||:|| |:| |||| :|||:|||||||| |||||:@LB@ UUUAGGCU AUG GACU UGUAGAAUGGAGA GGGAUG@LB@3'-AUU...GUCGG A CACUUCAUUUUCCA UUCUAUCU CAU -5'@LB@ | |@LB@ 61 1@LB@@LB@@LB@Energy -16.91 kcal/mol@LB@Hybridization Energy -34.139 kcal/mol@LB@Unfolding Energy - mRNA 4.55251 kcal/mol@LB@Unfolding Energy - sRNA 12.7042 kcal/mol@LB@@LB@Position - mRNA 119 -- 159@LB@Position - sRNA 1 -- 60@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 10 -- 16@LB@ |
50 |
0.0006038 |
0.04249 |
b3755 |
yieP |
-5.20 |
0.556147 |
189 -- 196 |
25 -- 32 |
putative transcriptional regulator |
|
_____________188______197\n_____________|________|\n5'-UUC...AAAAA________AGUAA...CCG-3'\n______________GGAAGAUA\n______________|:||||||\n______________CUUUCUAU\n3'-AUU...CCAGA________CUUGU...AUG-5'\n_____________|________|\n_____________33_______24\n |
190 -- 196 |
25 -- 31 |
-8.32385 kcal/mol |
1.19727 kcal/mol |
1.85262 kcal/mol |
188 197@LB@ | |@LB@5'-UUC...AAAAA AGUAA...CCG-3'@LB@ GGAAGAUA@LB@ |:||||||@LB@ CUUUCUAU@LB@3'-AUU...CCAGA CUUGU...AUG-5'@LB@ | |@LB@ 33 24@LB@@LB@@LB@Energy -5.20 kcal/mol@LB@Hybridization Energy -8.32385 kcal/mol@LB@Unfolding Energy - mRNA 1.19727 kcal/mol@LB@Unfolding Energy - sRNA 1.85262 kcal/mol@LB@@LB@Position - mRNA 189 -- 196@LB@Position - sRNA 25 -- 32@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 25 -- 31@LB@ |
118 |
0.003907 |
0.1165 |
b3827 |
yigM |
-8.32 |
0.129405 |
260 -- 268 |
1 -- 9 |
putative inner membrane EamA-like transporter |
|
_____________259_______269\n_____________|_________|\n5'-GGA...GGCGA_________GGGGC...UGG-3'\n______________GUACCUUGC\n______________|||||:|:|\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
262 -- 268 |
1 -- 7 |
-12.9582 kcal/mol |
2.53078 kcal/mol |
2.12872 kcal/mol |
259 269@LB@ | |@LB@5'-GGA...GGCGA GGGGC...UGG-3'@LB@ GUACCUUGC@LB@ |||||:|:|@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -8.32 kcal/mol@LB@Hybridization Energy -12.9582 kcal/mol@LB@Unfolding Energy - mRNA 2.53078 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 260 -- 268@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 262 -- 268@LB@Position Seed - sRNA 1 -- 7@LB@ |
112 |
0.003594 |
0.1129 |
b3866 |
yihI |
-3.87 |
0.795256 |
171 -- 194 |
53 -- 75 |
activator of Der GTPase |
|
_____________170______________________195\n_____________|________________________|\n5'-GAA...CUAUA_____UAAAA________AGA___ACCAU...GUC-3'\n______________CUGAA_____CGGCUAAA___CGA\n______________||:||_____|:||:|||___|||\n______________GAUUU_____GUCGGUUU___GCU\n3'-AUU...CCGCC_____UAUAA________AG____AAUGC...AUG-5'\n_____________|________________________|\n_____________76_______________________52\n |
181 -- 187 |
59 -- 65 |
-14.4152 kcal/mol |
4.20142 kcal/mol |
6.36326 kcal/mol |
170 195@LB@ | |@LB@5'-GAA...CUAUA UAAAA AGA ACCAU...GUC-3'@LB@ CUGAA CGGCUAAA CGA@LB@ ||:|| |:||:||| |||@LB@ GAUUU GUCGGUUU GCU@LB@3'-AUU...CCGCC UAUAA AG AAUGC...AUG-5'@LB@ | |@LB@ 76 52@LB@@LB@@LB@Energy -3.87 kcal/mol@LB@Hybridization Energy -14.4152 kcal/mol@LB@Unfolding Energy - mRNA 4.20142 kcal/mol@LB@Unfolding Energy - sRNA 6.36326 kcal/mol@LB@@LB@Position - mRNA 171 -- 194@LB@Position - sRNA 53 -- 75@LB@Position Seed - mRNA 181 -- 187@LB@Position Seed - sRNA 59 -- 65@LB@ |
88 |
0.002339 |
0.09349 |
b3878 |
yihQ |
-11.00 |
0.022508 |
260 -- 267 |
1 -- 8 |
putative sulpholipid alpha-glucosidase; alpha-glucosyl fluoride glucosidase |
b3656 |
_____________259______268\n_____________|________|\n5'-AAC...AGUUU________AUUUU...GCA-3'\n______________UACCCUAC\n______________||||||||\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
261 -- 267 |
1 -- 7 |
-13.427 kcal/mol |
0.33456 kcal/mol |
2.11603 kcal/mol |
259 268@LB@ | |@LB@5'-AAC...AGUUU AUUUU...GCA-3'@LB@ UACCCUAC@LB@ ||||||||@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -11.00 kcal/mol@LB@Hybridization Energy -13.427 kcal/mol@LB@Unfolding Energy - mRNA 0.33456 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 260 -- 267@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 261 -- 267@LB@Position Seed - sRNA 1 -- 7@LB@ |
52 |
0.0006736 |
0.04557 |
b3964 |
yijD |
-9.23 |
0.074829 |
177 -- 192 |
43 -- 57 |
DUF1422 family inner membrane protein |
|
_____________176______________193\n_____________|________________|\n5'-ACU...AUUAU_____GAA________GACGA...UGC-3'\n______________UCCGG___AUGUGAAG\n______________||||:___|:||||||\n______________AGGCU___UGCACUUC\n3'-AUU...GGUUU_____AA_________AUUUU...AUG-5'\n_____________|________________|\n_____________58_______________42\n |
186 -- 192 |
43 -- 49 |
-16.7307 kcal/mol |
4.24116 kcal/mol |
3.27382 kcal/mol |
176 193@LB@ | |@LB@5'-ACU...AUUAU GAA GACGA...UGC-3'@LB@ UCCGG AUGUGAAG@LB@ ||||: |:||||||@LB@ AGGCU UGCACUUC@LB@3'-AUU...GGUUU AA AUUUU...AUG-5'@LB@ | |@LB@ 58 42@LB@@LB@@LB@Energy -9.23 kcal/mol@LB@Hybridization Energy -16.7307 kcal/mol@LB@Unfolding Energy - mRNA 4.24116 kcal/mol@LB@Unfolding Energy - sRNA 3.27382 kcal/mol@LB@@LB@Position - mRNA 177 -- 192@LB@Position - sRNA 43 -- 57@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 43 -- 49@LB@ |
178 |
0.007695 |
0.1511 |
b4567 |
yjjZ |
-7.25 |
0.231371 |
185 -- 218 |
2 -- 33 |
uncharacterized protein |
|
_____________184_________________________________219\n_____________|___________________________________|\n5'-CGG...AUCAA_______GAU___AU___G____AA______G___GGCAG...GGA-3'\n______________UGAAAGA___GAA__CAU_UUGC__C_GUAC_CUG\n______________|||||||___|||__|||_||:|__|_||||_||:\n______________ACUUUCU___CUU__GUA_AAUG__G_CAUG_GAU\n3'-AUU...UCCAG_______AU_________G____GA_A____G___G-5'\n_____________|___________________________________|\n_____________34__________________________________1\n |
185 -- 191 |
27 -- 33 |
-22.8177 kcal/mol |
6.54395 kcal/mol |
9.04499 kcal/mol |
184 219@LB@ | |@LB@5'-CGG...AUCAA GAU AU G AA G GGCAG...GGA-3'@LB@ UGAAAGA GAA CAU UUGC C GUAC CUG@LB@ ||||||| ||| ||| ||:| | |||| ||:@LB@ ACUUUCU CUU GUA AAUG G CAUG GAU@LB@3'-AUU...UCCAG AU G GA A G G-5'@LB@ | |@LB@ 34 1@LB@@LB@@LB@Energy -7.25 kcal/mol@LB@Hybridization Energy -22.8177 kcal/mol@LB@Unfolding Energy - mRNA 6.54395 kcal/mol@LB@Unfolding Energy - sRNA 9.04499 kcal/mol@LB@@LB@Position - mRNA 185 -- 218@LB@Position - sRNA 2 -- 33@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 27 -- 33@LB@ |
103 |
0.003241 |
0.1101 |
b0837 |
yliI |
-8.40 |
0.123505 |
223 -- 230 |
4 -- 11 |
soluble aldose sugar dehydrogenase |
|
_____________222______231\n_____________|________|\n5'-GUC...UUUCC________CUUAU...AAC-3'\n______________UUGUGCCC\n______________:|||:|||\n______________GACAUGGG\n3'-AUU...AUGGA________AUG-5'\n_____________|________|\n_____________12_______3\n |
224 -- 230 |
4 -- 10 |
-12.324 kcal/mol |
0.491988 kcal/mol |
3.45361 kcal/mol |
222 231@LB@ | |@LB@5'-GUC...UUUCC CUUAU...AAC-3'@LB@ UUGUGCCC@LB@ :|||:|||@LB@ GACAUGGG@LB@3'-AUU...AUGGA AUG-5'@LB@ | |@LB@ 12 3@LB@@LB@@LB@Energy -8.40 kcal/mol@LB@Hybridization Energy -12.324 kcal/mol@LB@Unfolding Energy - mRNA 0.491988 kcal/mol@LB@Unfolding Energy - sRNA 3.45361 kcal/mol@LB@@LB@Position - mRNA 223 -- 230@LB@Position - sRNA 4 -- 11@LB@Position Seed - mRNA 224 -- 230@LB@Position Seed - sRNA 4 -- 10@LB@ |
168 |
0.006917 |
0.1448 |
b3070 |
yqjH |
-8.25 |
0.134865 |
172 -- 181 |
49 -- 58 |
putative siderophore interacting protein |
|
_____________171________182\n_____________|__________|\n5'-ACU...GAUAU__________CAUCA...AGC-3'\n______________AUCUGAUUAC\n______________|||:||||||\n______________UAGGCUAAUG\n3'-AUU...CGGUU__________CACUU...AUG-5'\n_____________|__________|\n_____________59_________48\n |
175 -- 181 |
49 -- 55 |
-10.8722 kcal/mol |
2.31397 kcal/mol |
0.318367 kcal/mol |
171 182@LB@ | |@LB@5'-ACU...GAUAU CAUCA...AGC-3'@LB@ AUCUGAUUAC@LB@ |||:||||||@LB@ UAGGCUAAUG@LB@3'-AUU...CGGUU CACUU...AUG-5'@LB@ | |@LB@ 59 48@LB@@LB@@LB@Energy -8.25 kcal/mol@LB@Hybridization Energy -10.8722 kcal/mol@LB@Unfolding Energy - mRNA 2.31397 kcal/mol@LB@Unfolding Energy - sRNA 0.318367 kcal/mol@LB@@LB@Position - mRNA 172 -- 181@LB@Position - sRNA 49 -- 58@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 49 -- 55@LB@ |