| 91 |
0.005641 |
0.2147 |
b3956 |
ppc |
-14.82 |
0.030673 |
242 -- 282 |
2 -- 37 |
phosphoenolpyruvate carboxylase |
|
_____________241_________________________________________283\n_____________|___________________________________________|\n5'-CUU...AGUAU____G________CU____GAAAC_________U_____U___GAGAA...AAC-3'\n______________GCUC_GCAAAGUG__GGGA_____CAUCAAGGA___GCG_UGG\n______________||||_:||||:||__||||_____||||||:||___||:_|||\n______________CGAG_UGUUUUAC__CCCU_____GUAGUUUCU___CGU_ACC\n3'-UUU...CUACC____G____________________________UUU___C___G-5'\n_____________|___________________________________________|\n_____________38__________________________________________1\n |
268 -- 274 |
12 -- 18 |
-37.6415 kcal/mol |
13.2441 kcal/mol |
9.57751 kcal/mol |
241 283@LB@ | |@LB@5'-CUU...AGUAU G CU GAAAC U U GAGAA...AAC-3'@LB@ GCUC GCAAAGUG GGGA CAUCAAGGA GCG UGG@LB@ |||| :||||:|| |||| ||||||:|| ||: |||@LB@ CGAG UGUUUUAC CCCU GUAGUUUCU CGU ACC@LB@3'-UUU...CUACC G UUU C G-5'@LB@ | |@LB@ 38 1@LB@@LB@@LB@Energy -14.82 kcal/mol@LB@Hybridization Energy -37.6415 kcal/mol@LB@Unfolding Energy - mRNA 13.2441 kcal/mol@LB@Unfolding Energy - sRNA 9.57751 kcal/mol@LB@@LB@Position - mRNA 242 -- 282@LB@Position - sRNA 2 -- 37@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 12 -- 18@LB@ |
| 92 |
0.005693 |
0.2147 |
b2099 |
yegU |
-12.49 |
0.099484 |
183 -- 197 |
7 -- 22 |
ADP-ribosylglycohydrolase family protein |
|
_____________182______________198\n_____________|________________|\n5'-GUG...GCGUU________________UAAAU...CAC-3'\n______________GACA_CAAGGGGAAGU\n______________||||_|||:|::|||:\n______________CUGU_GUUUCUUUUCG\n3'-UUU...UACCC____A___________UCACCG-5'\n_____________|________________|\n_____________23_______________6\n |
191 -- 197 |
7 -- 13 |
-15.6094 kcal/mol |
2.53245 kcal/mol |
0.590875 kcal/mol |
182 198@LB@ | |@LB@5'-GUG...GCGUU UAAAU...CAC-3'@LB@ GACA CAAGGGGAAGU@LB@ |||| |||:|::|||:@LB@ CUGU GUUUCUUUUCG@LB@3'-UUU...UACCC A UCACCG-5'@LB@ | |@LB@ 23 6@LB@@LB@@LB@Energy -12.49 kcal/mol@LB@Hybridization Energy -15.6094 kcal/mol@LB@Unfolding Energy - mRNA 2.53245 kcal/mol@LB@Unfolding Energy - sRNA 0.590875 kcal/mol@LB@@LB@Position - mRNA 183 -- 197@LB@Position - sRNA 7 -- 22@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 7 -- 13@LB@ |
| 93 |
0.00579 |
0.2147 |
b1256 |
ompW |
-13.14 |
0.073154 |
206 -- 220 |
1 -- 16 |
outer membrane protein W |
|
_____________205______________221\n_____________|________________|\n5'-GAC...AUGAA____UU__________GGCUU...CUG-3'\n______________AAAG__AA_CAGUGGC\n______________||||__||_|||||||\n______________UUUC__UU_GUCACCG\n3'-UUU...UGUAG____UU__C_______-5'\n_____________|_______________|\n_____________17______________1\n |
214 -- 220 |
1 -- 7 |
-16.0357 kcal/mol |
1.55126 kcal/mol |
1.34555 kcal/mol |
205 221@LB@ | |@LB@5'-GAC...AUGAA UU GGCUU...CUG-3'@LB@ AAAG AA CAGUGGC@LB@ |||| || |||||||@LB@ UUUC UU GUCACCG@LB@3'-UUU...UGUAG UU C -5'@LB@ | |@LB@ 17 1@LB@@LB@@LB@Energy -13.14 kcal/mol@LB@Hybridization Energy -16.0357 kcal/mol@LB@Unfolding Energy - mRNA 1.55126 kcal/mol@LB@Unfolding Energy - sRNA 1.34555 kcal/mol@LB@@LB@Position - mRNA 206 -- 220@LB@Position - sRNA 1 -- 16@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 94 |
0.005808 |
0.2147 |
b0652 |
gltL |
-13.33 |
0.066498 |
266 -- 292 |
1 -- 31 |
glutamate/aspartate ABC transporter ATPase |
|
_____________265_____________________________293\n_____________|_______________________________|\n5'-CUC...UCAAC_______AAAA________C___________GGUUUGCG-3'\n______________CGAAGUG________AAGG_GAAGUGGUGGU\n______________|:||:||________||:|_:|||::||||:\n______________GUUUUAC________UUUC_UUUCGUCACCG\n3'-UUU...GAGGU_______CCCUGUAG____U___________-5'\n_____________|______________________________|\n_____________32_____________________________1\n |
286 -- 292 |
1 -- 7 |
-20.9442 kcal/mol |
5.07032 kcal/mol |
2.53929 kcal/mol |
265 293@LB@ | |@LB@5'-CUC...UCAAC AAAA C GGUUUGCG-3'@LB@ CGAAGUG AAGG GAAGUGGUGGU@LB@ |:||:|| ||:| :|||::||||:@LB@ GUUUUAC UUUC UUUCGUCACCG@LB@3'-UUU...GAGGU CCCUGUAG U -5'@LB@ | |@LB@ 32 1@LB@@LB@@LB@Energy -13.33 kcal/mol@LB@Hybridization Energy -20.9442 kcal/mol@LB@Unfolding Energy - mRNA 5.07032 kcal/mol@LB@Unfolding Energy - sRNA 2.53929 kcal/mol@LB@@LB@Position - mRNA 266 -- 292@LB@Position - sRNA 1 -- 31@LB@Position Seed - mRNA 286 -- 292@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 95 |
0.005813 |
0.2147 |
b3450 |
ugpC |
-12.76 |
0.087557 |
84 -- 111 |
1 -- 34 |
sn-glycerol-3-phosphate ABC transporter ATPase |
|
_____________83_________________________________112\n_____________|__________________________________|\n5'-GUG...AGGCA___________A________U_____________GAUGU...UCG-3'\n______________CCACGGAAUGG__AC_UCAG_GA____UGGUGGC\n______________||||::|||||__||_|||:_||____::|||||\n______________GGUGUUUUACC__UG_AGUU_CU____GUCACCG\n3'-UUU...CCCGA___________CC__U____U__UUUC_______-5'\n_____________|_________________________________|\n_____________35________________________________1\n |
105 -- 111 |
1 -- 7 |
-27.9886 kcal/mol |
10.9582 kcal/mol |
4.26884 kcal/mol |
83 112@LB@ | |@LB@5'-GUG...AGGCA A U GAUGU...UCG-3'@LB@ CCACGGAAUGG AC UCAG GA UGGUGGC@LB@ ||||::||||| || |||: || ::|||||@LB@ GGUGUUUUACC UG AGUU CU GUCACCG@LB@3'-UUU...CCCGA CC U U UUUC -5'@LB@ | |@LB@ 35 1@LB@@LB@@LB@Energy -12.76 kcal/mol@LB@Hybridization Energy -27.9886 kcal/mol@LB@Unfolding Energy - mRNA 10.9582 kcal/mol@LB@Unfolding Energy - sRNA 4.26884 kcal/mol@LB@@LB@Position - mRNA 84 -- 111@LB@Position - sRNA 1 -- 34@LB@Position Seed - mRNA 105 -- 111@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 96 |
0.005909 |
0.216 |
b0511 |
ybbW |
-13.57 |
0.059054 |
201 -- 236 |
1 -- 27 |
putative allantoin transporter |
|
_____________200___________________________________237\n_____________|_____________________________________|\n5'-UGG...GAUUU____A_____________ACUAUUCC____AC_C___UAUAG...UUA-3'\n______________AUGG__ACAUCAGAGAAA________AGCA__G_GGC\n______________||||__||||||:|||||________||||__|_|||\n______________UACC__UGUAGUUUCUUU________UCGU__C_CCG\n3'-UUU...UGUUU____CC___________________________A___-5'\n_____________|____________________________________|\n_____________28___________________________________1\n |
211 -- 217 |
10 -- 16 |
-23.7564 kcal/mol |
7.66376 kcal/mol |
2.51867 kcal/mol |
200 237@LB@ | |@LB@5'-UGG...GAUUU A ACUAUUCC AC C UAUAG...UUA-3'@LB@ AUGG ACAUCAGAGAAA AGCA G GGC@LB@ |||| ||||||:||||| |||| | |||@LB@ UACC UGUAGUUUCUUU UCGU C CCG@LB@3'-UUU...UGUUU CC A -5'@LB@ | |@LB@ 28 1@LB@@LB@@LB@Energy -13.57 kcal/mol@LB@Hybridization Energy -23.7564 kcal/mol@LB@Unfolding Energy - mRNA 7.66376 kcal/mol@LB@Unfolding Energy - sRNA 2.51867 kcal/mol@LB@@LB@Position - mRNA 201 -- 236@LB@Position - sRNA 1 -- 27@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 10 -- 16@LB@ |
| 97 |
0.005972 |
0.2161 |
b0768 |
ybhD |
-15.34 |
0.022873 |
51 -- 78 |
6 -- 32 |
putative DNA-binding transcriptional regulator |
b2409 |
_____________50___________________________79\n_____________|____________________________|\n5'-CAG...UUAUU____U____UU__________C______UCUCU...CAU-3'\n______________GCGA_AUGG__ACAUUAAGGG_AAAGCA\n______________:|:|_||||__||||:||:|:_||||||\n______________UGUU_UACC__UGUAGUUUCU_UUUCGU\n3'-UUU...CGAGG____U____CC_________________CACCG-5'\n_____________|____________________________|\n_____________33___________________________5\n |
64 -- 70 |
13 -- 19 |
-24.2506 kcal/mol |
6.37495 kcal/mol |
2.53457 kcal/mol |
50 79@LB@ | |@LB@5'-CAG...UUAUU U UU C UCUCU...CAU-3'@LB@ GCGA AUGG ACAUUAAGGG AAAGCA@LB@ :|:| |||| ||||:||:|: ||||||@LB@ UGUU UACC UGUAGUUUCU UUUCGU@LB@3'-UUU...CGAGG U CC CACCG-5'@LB@ | |@LB@ 33 5@LB@@LB@@LB@Energy -15.34 kcal/mol@LB@Hybridization Energy -24.2506 kcal/mol@LB@Unfolding Energy - mRNA 6.37495 kcal/mol@LB@Unfolding Energy - sRNA 2.53457 kcal/mol@LB@@LB@Position - mRNA 51 -- 78@LB@Position - sRNA 6 -- 32@LB@Position Seed - mRNA 64 -- 70@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 98 |
0.006107 |
0.2179 |
b3822 |
recQ |
-9.35 |
0.343777 |
185 -- 205 |
1 -- 22 |
ATP-dependent DNA helicase |
|
_____________184_____________________206\n_____________|_______________________|\n5'-CGC...UUUCA___A_______U___U_______GCAGG...UUA-3'\n______________GGC_AUCGGGG_GAA___GUGGC\n______________|:|_|||:::|_:||___|||||\n______________CUG_UAGUUUC_UUU___CACCG\n3'-UUU...UACCC___________U___CGU_____-5'\n_____________|______________________|\n_____________23_____________________1\n |
189 -- 195 |
13 -- 19 |
-17.8698 kcal/mol |
6.98341 kcal/mol |
1.54023 kcal/mol |
184 206@LB@ | |@LB@5'-CGC...UUUCA A U U GCAGG...UUA-3'@LB@ GGC AUCGGGG GAA GUGGC@LB@ |:| |||:::| :|| |||||@LB@ CUG UAGUUUC UUU CACCG@LB@3'-UUU...UACCC U CGU -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -9.35 kcal/mol@LB@Hybridization Energy -17.8698 kcal/mol@LB@Unfolding Energy - mRNA 6.98341 kcal/mol@LB@Unfolding Energy - sRNA 1.54023 kcal/mol@LB@@LB@Position - mRNA 185 -- 205@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 13 -- 19@LB@ |
| 99 |
0.006147 |
0.2179 |
b4477 |
dgoA |
-14.15 |
0.044006 |
176 -- 210 |
1 -- 31 |
2-oxo-3-deoxygalactonate 6-phosphate aldolase |
|
_____________175___________________________________211\n_____________|_____________________________________|\n5'-CAG...CAUUU____C___UAUAA___G_____CUCAU__________AAACU...UCG-3'\n______________CAGG_UGG_____GGA_CAUCG_______GCAGUGGC\n______________||::_|||_____|||_||||:_______||||||||\n______________GUUU_ACC_____CCU_GUAGU_______CGUCACCG\n3'-UUU...GAGGU____U_________________UUCUUUU________-5'\n_____________|____________________________________|\n_____________32___________________________________1\n |
204 -- 210 |
1 -- 7 |
-26.5297 kcal/mol |
9.84206 kcal/mol |
2.53929 kcal/mol |
175 211@LB@ | |@LB@5'-CAG...CAUUU C UAUAA G CUCAU AAACU...UCG-3'@LB@ CAGG UGG GGA CAUCG GCAGUGGC@LB@ ||:: ||| ||| ||||: ||||||||@LB@ GUUU ACC CCU GUAGU CGUCACCG@LB@3'-UUU...GAGGU U UUCUUUU -5'@LB@ | |@LB@ 32 1@LB@@LB@@LB@Energy -14.15 kcal/mol@LB@Hybridization Energy -26.5297 kcal/mol@LB@Unfolding Energy - mRNA 9.84206 kcal/mol@LB@Unfolding Energy - sRNA 2.53929 kcal/mol@LB@@LB@Position - mRNA 176 -- 210@LB@Position - sRNA 1 -- 31@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 100 |
0.006296 |
0.2188 |
b1321 |
ycjX |
-13.69 |
0.055797 |
38 -- 45 |
18 -- 25 |
DUF463 family protein puatative P-loop NTPase |
|
_____________37_______46\n_____________|________|\n5'-UGA...UAGUA________AGGUC...CAG-3'\n______________GGGGACAU\n______________||||||||\n______________CCCCUGUA\n3'-UUU...UUUUA________GUUUC...CCG-5'\n_____________|________|\n_____________26_______17\n |
39 -- 45 |
18 -- 24 |
-15.5505 kcal/mol |
1.21152 kcal/mol |
0.65218 kcal/mol |
37 46@LB@ | |@LB@5'-UGA...UAGUA AGGUC...CAG-3'@LB@ GGGGACAU@LB@ ||||||||@LB@ CCCCUGUA@LB@3'-UUU...UUUUA GUUUC...CCG-5'@LB@ | |@LB@ 26 17@LB@@LB@@LB@Energy -13.69 kcal/mol@LB@Hybridization Energy -15.5505 kcal/mol@LB@Unfolding Energy - mRNA 1.21152 kcal/mol@LB@Unfolding Energy - sRNA 0.65218 kcal/mol@LB@@LB@Position - mRNA 38 -- 45@LB@Position - sRNA 18 -- 25@LB@Position Seed - mRNA 39 -- 45@LB@Position Seed - sRNA 18 -- 24@LB@ |
