106 |
0.04101 |
0.3134 |
ct_445 |
gltX |
-7.36 |
0.119711 |
199 -- 233 |
6 -- 32 |
glutamate--tRNA ligase |
|
_____________198__________________________________234\n_____________|____________________________________|\n5'-UUU...GUAGC___U_A________AAA__UAC__________A___CCUUC...CAA-3'\n______________GAA_G_CUG_UCCA___UG___GCGUUAGAGU_GCC\n______________|||_|_||:_||||___||___||||||||:|_:||\n______________CUU_C_GAU_AGGU___AC___CGCAAUCUUA_UGG\n3'-UUU...UCAGU_________A__________________________UUGAA-5'\n_____________|____________________________________|\n_____________33___________________________________5\n |
220 -- 226 |
12 -- 18 |
-22.1489 kcal/mol |
6.20636 kcal/mol |
8.57923 kcal/mol |
198 234@LB@ | |@LB@5'-UUU...GUAGC U A AAA UAC A CCUUC...CAA-3'@LB@ GAA G CUG UCCA UG GCGUUAGAGU GCC@LB@ ||| | ||: |||| || ||||||||:| :||@LB@ CUU C GAU AGGU AC CGCAAUCUUA UGG@LB@3'-UUU...UCAGU A UUGAA-5'@LB@ | |@LB@ 33 5@LB@@LB@@LB@Energy -7.36 kcal/mol@LB@Hybridization Energy -22.1489 kcal/mol@LB@Unfolding Energy - mRNA 6.20636 kcal/mol@LB@Unfolding Energy - sRNA 8.57923 kcal/mol@LB@@LB@Position - mRNA 199 -- 233@LB@Position - sRNA 6 -- 32@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 12 -- 18@LB@ |
143 |
0.05698 |
0.3262 |
ct_451 |
cdsA |
-5.69 |
0.268983 |
146 -- 169 |
3 -- 34 |
phosphatidate cytidylyltransferase |
|
_____________145______________________________170\n_____________|________________________________|\n5'-GAC...CUUGC_______G___AAAAC________________AACGA...GUA-3'\n______________UAGAAGC_AUU_____________AUACCAAC\n______________:||||||_|||_____________||||||||\n______________GUCUUCG_UAA_____________UAUGGUUG\n3'-UUU...UCUCA_______A___GGUACCGCAAUCU________AA-5'\n_____________|________________________________|\n_____________35_______________________________2\n |
163 -- 169 |
3 -- 9 |
-16.5797 kcal/mol |
2.2962 kcal/mol |
8.59197 kcal/mol |
145 170@LB@ | |@LB@5'-GAC...CUUGC G AAAAC AACGA...GUA-3'@LB@ UAGAAGC AUU AUACCAAC@LB@ :|||||| ||| ||||||||@LB@ GUCUUCG UAA UAUGGUUG@LB@3'-UUU...UCUCA A GGUACCGCAAUCU AA-5'@LB@ | |@LB@ 35 2@LB@@LB@@LB@Energy -5.69 kcal/mol@LB@Hybridization Energy -16.5797 kcal/mol@LB@Unfolding Energy - mRNA 2.2962 kcal/mol@LB@Unfolding Energy - sRNA 8.59197 kcal/mol@LB@@LB@Position - mRNA 146 -- 169@LB@Position - sRNA 3 -- 34@LB@Position Seed - mRNA 163 -- 169@LB@Position Seed - sRNA 3 -- 9@LB@ |
30 |
0.009028 |
0.2474 |
ct_455 |
murA |
-8.03 |
0.084305 |
255 -- 264 |
26 -- 35 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|
_____________254________265\n_____________|__________|\n5'-AAA...GCGUG__________AAAAU...UAC-3'\n______________UCAGGAGCUA\n______________||||:|||||\n______________AGUCUUCGAU\n3'-UUU...AUCUC__________AAGGU...GAA-5'\n_____________|__________|\n_____________36_________25\n |
258 -- 264 |
26 -- 32 |
-13.9898 kcal/mol |
1.25877 kcal/mol |
4.69985 kcal/mol |
254 265@LB@ | |@LB@5'-AAA...GCGUG AAAAU...UAC-3'@LB@ UCAGGAGCUA@LB@ ||||:|||||@LB@ AGUCUUCGAU@LB@3'-UUU...AUCUC AAGGU...GAA-5'@LB@ | |@LB@ 36 25@LB@@LB@@LB@Energy -8.03 kcal/mol@LB@Hybridization Energy -13.9898 kcal/mol@LB@Unfolding Energy - mRNA 1.25877 kcal/mol@LB@Unfolding Energy - sRNA 4.69985 kcal/mol@LB@@LB@Position - mRNA 255 -- 264@LB@Position - sRNA 26 -- 35@LB@Position Seed - mRNA 258 -- 264@LB@Position Seed - sRNA 26 -- 32@LB@ |
101 |
0.03758 |
0.3036 |
ct_457 |
N/A |
-2.86 |
0.734073 |
54 -- 60 |
80 -- 86 |
transcriptional regulator |
|
_____________53______61\n_____________|_______|\n5'-GGA...GUAAG_______GGUUA...UCU-3'\n______________AUGGUUG\n______________|:||:|:\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
54 -- 60 |
80 -- 86 |
-6.17108 kcal/mol |
2.2465 kcal/mol |
1.06449 kcal/mol |
53 61@LB@ | |@LB@5'-GGA...GUAAG GGUUA...UCU-3'@LB@ AUGGUUG@LB@ |:||:|:@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -2.86 kcal/mol@LB@Hybridization Energy -6.17108 kcal/mol@LB@Unfolding Energy - mRNA 2.2465 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 54 -- 60@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 54 -- 60@LB@Position Seed - sRNA 80 -- 86@LB@ |
41 |
0.01426 |
0.2859 |
ct_458 |
YhhY |
-4.46 |
0.446972 |
238 -- 245 |
81 -- 88 |
acetyltransferase |
|
_____________237______246\n_____________|________|\n5'-UUA...UCGGU________CCUGA...GAG-3'\n______________AUACGGUU\n______________||||||:|\n______________UAUGCCGA\n3'-UUU...GCCUC________UUGAG...GAA-5'\n_____________|________|\n_____________89_______80\n |
239 -- 245 |
81 -- 87 |
-8.66821 kcal/mol |
3.10635 kcal/mol |
1.09753 kcal/mol |
237 246@LB@ | |@LB@5'-UUA...UCGGU CCUGA...GAG-3'@LB@ AUACGGUU@LB@ ||||||:|@LB@ UAUGCCGA@LB@3'-UUU...GCCUC UUGAG...GAA-5'@LB@ | |@LB@ 89 80@LB@@LB@@LB@Energy -4.46 kcal/mol@LB@Hybridization Energy -8.66821 kcal/mol@LB@Unfolding Energy - mRNA 3.10635 kcal/mol@LB@Unfolding Energy - sRNA 1.09753 kcal/mol@LB@@LB@Position - mRNA 238 -- 245@LB@Position - sRNA 81 -- 88@LB@Position Seed - mRNA 239 -- 245@LB@Position Seed - sRNA 81 -- 87@LB@ |
66 |
0.02511 |
0.29 |
ct_461 |
N/A |
-5.44 |
0.300406 |
64 -- 70 |
79 -- 85 |
UDP-2 3-diacylglucosamine pyrophosphohydrolase |
|
_____________63______71\n_____________|_______|\n5'-ACA...UAAAU_______AGUUU...UGA-3'\n______________UGGCUAA\n______________:||||||\n______________GCCGAUU\n3'-UUU...UCUAU_______GAGGU...GAA-5'\n_____________|_______|\n_____________86______78\n |
64 -- 70 |
79 -- 85 |
-7.83174 kcal/mol |
1.29235 kcal/mol |
1.09751 kcal/mol |
63 71@LB@ | |@LB@5'-ACA...UAAAU AGUUU...UGA-3'@LB@ UGGCUAA@LB@ :||||||@LB@ GCCGAUU@LB@3'-UUU...UCUAU GAGGU...GAA-5'@LB@ | |@LB@ 86 78@LB@@LB@@LB@Energy -5.44 kcal/mol@LB@Hybridization Energy -7.83174 kcal/mol@LB@Unfolding Energy - mRNA 1.29235 kcal/mol@LB@Unfolding Energy - sRNA 1.09751 kcal/mol@LB@@LB@Position - mRNA 64 -- 70@LB@Position - sRNA 79 -- 85@LB@Position Seed - mRNA 64 -- 70@LB@Position Seed - sRNA 79 -- 85@LB@ |
45 |
0.01671 |
0.29 |
ct_469 |
N/A |
-9.81 |
0.031394 |
4 -- 20 |
17 -- 35 |
|
|
_____________3___________________21\n_____________|___________________|\n________5'-AUU___________________AACCU...UCU-3'\n______________UCAGAAGCU_UUUC_UGGU\n______________|||||||||_||:|_|||:\n______________AGUCUUCGA_AAGG_ACCG\n3'-UUU...AUCUC_________U____U____CAAUC...GAA-5'\n_____________|___________________|\n_____________36__________________16\n |
6 -- 12 |
27 -- 33 |
-19.4129 kcal/mol |
4.62874 kcal/mol |
4.9781 kcal/mol |
3 21@LB@ | |@LB@ 5'-AUU AACCU...UCU-3'@LB@ UCAGAAGCU UUUC UGGU@LB@ ||||||||| ||:| |||:@LB@ AGUCUUCGA AAGG ACCG@LB@3'-UUU...AUCUC U U CAAUC...GAA-5'@LB@ | |@LB@ 36 16@LB@@LB@@LB@Energy -9.81 kcal/mol@LB@Hybridization Energy -19.4129 kcal/mol@LB@Unfolding Energy - mRNA 4.62874 kcal/mol@LB@Unfolding Energy - sRNA 4.9781 kcal/mol@LB@@LB@Position - mRNA 4 -- 20@LB@Position - sRNA 17 -- 35@LB@Position Seed - mRNA 6 -- 12@LB@Position Seed - sRNA 27 -- 33@LB@ |
126 |
0.05087 |
0.3262 |
ct_474 |
N/A |
-6.92 |
0.149609 |
150 -- 156 |
15 -- 21 |
|
|
_____________149_____157\n_____________|_______|\n5'-AAA...ACGAA_______GUAUA...UAU-3'\n______________GUGGCGU\n______________:||||||\n______________UACCGCA\n3'-UUU...UAAGG_______AUCUU...GAA-5'\n_____________|_______|\n_____________22______14\n |
150 -- 156 |
15 -- 21 |
-10.3963 kcal/mol |
2.28336 kcal/mol |
1.18845 kcal/mol |
149 157@LB@ | |@LB@5'-AAA...ACGAA GUAUA...UAU-3'@LB@ GUGGCGU@LB@ :||||||@LB@ UACCGCA@LB@3'-UUU...UAAGG AUCUU...GAA-5'@LB@ | |@LB@ 22 14@LB@@LB@@LB@Energy -6.92 kcal/mol@LB@Hybridization Energy -10.3963 kcal/mol@LB@Unfolding Energy - mRNA 2.28336 kcal/mol@LB@Unfolding Energy - sRNA 1.18845 kcal/mol@LB@@LB@Position - mRNA 150 -- 156@LB@Position - sRNA 15 -- 21@LB@Position Seed - mRNA 150 -- 156@LB@Position Seed - sRNA 15 -- 21@LB@ |
176 |
0.07518 |
0.3511 |
ct_481 |
N/A |
-6.18 |
0.214715 |
76 -- 94 |
18 -- 35 |
|
|
_____________75__________________95\n_____________|___________________|\n5'-AUA...CCAUU__U___AU___________AAACA...AUU-3'\n______________UC_GAA__CUGUUCUAUGG\n______________||_|||__||:|||:||||\n______________AG_CUU__GAUAAGGUACC\n3'-UUU...AUCUC__U___C____________GCAAU...GAA-5'\n_____________|___________________|\n_____________36__________________17\n |
88 -- 94 |
18 -- 24 |
-16.4052 kcal/mol |
5.24588 kcal/mol |
4.97803 kcal/mol |
75 95@LB@ | |@LB@5'-AUA...CCAUU U AU AAACA...AUU-3'@LB@ UC GAA CUGUUCUAUGG@LB@ || ||| ||:|||:||||@LB@ AG CUU GAUAAGGUACC@LB@3'-UUU...AUCUC U C GCAAU...GAA-5'@LB@ | |@LB@ 36 17@LB@@LB@@LB@Energy -6.18 kcal/mol@LB@Hybridization Energy -16.4052 kcal/mol@LB@Unfolding Energy - mRNA 5.24588 kcal/mol@LB@Unfolding Energy - sRNA 4.97803 kcal/mol@LB@@LB@Position - mRNA 76 -- 94@LB@Position - sRNA 18 -- 35@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 18 -- 24@LB@ |
35 |
0.01072 |
0.2518 |
ct_483 |
N/A |
-8.14 |
0.079674 |
97 -- 146 |
5 -- 57 |
|
|
_____________96______________________________________________________147\n_____________|_______________________________________________________|\n5'-UAG...GUCUU____GAC_______G_GAAAU_____UC____________AAAAAAA________AGGUA...GCG-3'\n______________CUCC____UACAGA_A_____GAGUC_____CUAUUCCAU________AAUACCA\n______________|:||____||||:|_|_____|||||_____|||||||||________|||||||\n______________GGGG____AUGUUU_U_____CUCAG_____GAUAAGGUA________UUAUGGU\n3'-UUU...GAAGG____ACAC______G_GAU_______UCUUC_________CCGCAAUC_______UGAA-5'\n_____________|_______________________________________________________|\n_____________58______________________________________________________4\n |
140 -- 146 |
5 -- 11 |
-33.404 kcal/mol |
8.71732 kcal/mol |
16.5501 kcal/mol |
96 147@LB@ | |@LB@5'-UAG...GUCUU GAC G GAAAU UC AAAAAAA AGGUA...GCG-3'@LB@ CUCC UACAGA A GAGUC CUAUUCCAU AAUACCA@LB@ |:|| ||||:| | ||||| ||||||||| |||||||@LB@ GGGG AUGUUU U CUCAG GAUAAGGUA UUAUGGU@LB@3'-UUU...GAAGG ACAC G GAU UCUUC CCGCAAUC UGAA-5'@LB@ | |@LB@ 58 4@LB@@LB@@LB@Energy -8.14 kcal/mol@LB@Hybridization Energy -33.404 kcal/mol@LB@Unfolding Energy - mRNA 8.71732 kcal/mol@LB@Unfolding Energy - sRNA 16.5501 kcal/mol@LB@@LB@Position - mRNA 97 -- 146@LB@Position - sRNA 5 -- 57@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 5 -- 11@LB@ |