81 |
0.02893 |
0.29 |
ct_185 |
zwf |
-6.95 |
0.147965 |
38 -- 47 |
51 -- 60 |
glucose-6-phosphate 1-dehydrogenase |
|
_____________37_________48\n_____________|__________|\n5'-AAG...GCCUG__________AUCGU...UUU-3'\n______________UCCUCCCUGU\n______________|||:||||||\n______________AGGGGGGACA\n3'-UUU...ACUGA__________CAUGU...GAA-5'\n_____________|__________|\n_____________61_________50\n |
41 -- 47 |
51 -- 57 |
-17.9011 kcal/mol |
1.87917 kcal/mol |
9.07545 kcal/mol |
37 48@LB@ | |@LB@5'-AAG...GCCUG AUCGU...UUU-3'@LB@ UCCUCCCUGU@LB@ |||:||||||@LB@ AGGGGGGACA@LB@3'-UUU...ACUGA CAUGU...GAA-5'@LB@ | |@LB@ 61 50@LB@@LB@@LB@Energy -6.95 kcal/mol@LB@Hybridization Energy -17.9011 kcal/mol@LB@Unfolding Energy - mRNA 1.87917 kcal/mol@LB@Unfolding Energy - sRNA 9.07545 kcal/mol@LB@@LB@Position - mRNA 38 -- 47@LB@Position - sRNA 51 -- 60@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 51 -- 57@LB@ |
181 |
0.07898 |
0.3587 |
ct_186 |
devB |
-5.59 |
0.281766 |
201 -- 207 |
80 -- 86 |
6-phosphogluconolactonase |
|
_____________200_____208\n_____________|_______|\n5'-GAA...UAUAC_______CCCUU...CAG-3'\n______________AUGGCUA\n______________|:|||||\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
201 -- 207 |
80 -- 86 |
-9.11344 kcal/mol |
2.46127 kcal/mol |
1.06449 kcal/mol |
200 208@LB@ | |@LB@5'-GAA...UAUAC CCCUU...CAG-3'@LB@ AUGGCUA@LB@ |:|||||@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -5.59 kcal/mol@LB@Hybridization Energy -9.11344 kcal/mol@LB@Unfolding Energy - mRNA 2.46127 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 201 -- 207@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 80 -- 86@LB@ |
193 |
0.08525 |
0.3631 |
ct_196 |
N/A |
-5.32 |
0.316248 |
140 -- 149 |
20 -- 29 |
inclusion membrane protein |
|
_____________139________150\n_____________|__________|\n5'-UUU...AUAAU__________UUCUU...AAC-3'\n______________GCUAUUUCAU\n______________||||||:|||\n______________CGAUAAGGUA\n3'-UUU...GUCUU__________CCGCA...GAA-5'\n_____________|__________|\n_____________30_________19\n |
141 -- 147 |
22 -- 28 |
-11.6207 kcal/mol |
1.68905 kcal/mol |
4.60882 kcal/mol |
139 150@LB@ | |@LB@5'-UUU...AUAAU UUCUU...AAC-3'@LB@ GCUAUUUCAU@LB@ ||||||:|||@LB@ CGAUAAGGUA@LB@3'-UUU...GUCUU CCGCA...GAA-5'@LB@ | |@LB@ 30 19@LB@@LB@@LB@Energy -5.32 kcal/mol@LB@Hybridization Energy -11.6207 kcal/mol@LB@Unfolding Energy - mRNA 1.68905 kcal/mol@LB@Unfolding Energy - sRNA 4.60882 kcal/mol@LB@@LB@Position - mRNA 140 -- 149@LB@Position - sRNA 20 -- 29@LB@Position Seed - mRNA 141 -- 147@LB@Position Seed - sRNA 22 -- 28@LB@ |
1 |
6.997e-05 |
0.03358 |
ct_198 |
oppA_3 |
-8.59 |
0.062291 |
189 -- 206 |
17 -- 33 |
oligopeptide ABC transporter substrate-binding protein |
|
_____________188________________207\n_____________|__________________|\n5'-AAA...UCUAA______C________C__AAGAU...CUC-3'\n______________GGAGGU_AUUCCAUG_GC\n______________:||:|:_||||||||_||\n______________UCUUCG_UAAGGUAC_CG\n3'-UUU...CUCAG______A___________CAAUC...GAA-5'\n_____________|__________________|\n_____________34_________________16\n |
197 -- 203 |
19 -- 25 |
-19.6111 kcal/mol |
6.04348 kcal/mol |
4.97804 kcal/mol |
188 207@LB@ | |@LB@5'-AAA...UCUAA C C AAGAU...CUC-3'@LB@ GGAGGU AUUCCAUG GC@LB@ :||:|: |||||||| ||@LB@ UCUUCG UAAGGUAC CG@LB@3'-UUU...CUCAG A CAAUC...GAA-5'@LB@ | |@LB@ 34 16@LB@@LB@@LB@Energy -8.59 kcal/mol@LB@Hybridization Energy -19.6111 kcal/mol@LB@Unfolding Energy - mRNA 6.04348 kcal/mol@LB@Unfolding Energy - sRNA 4.97804 kcal/mol@LB@@LB@Position - mRNA 189 -- 206@LB@Position - sRNA 17 -- 33@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 19 -- 25@LB@ |
150 |
0.06394 |
0.3424 |
ct_208 |
gseA |
-4.42 |
0.454874 |
290 -- 300 |
19 -- 29 |
3-deoxy-D-manno-octulosonic acid transferase |
|
_____________289________300\n_____________|__________|\n5'-UUG...AAAGU___U_______-3'\n______________GUU_UUCCAUG\n______________|:|_|||||||\n______________CGA_AAGGUAC\n3'-UUU...GUCUU___U_______CGCAA...GAA-5'\n_____________|___________|\n_____________30__________18\n |
294 -- 300 |
19 -- 25 |
-10.2082 kcal/mol |
1.1238 kcal/mol |
4.66719 kcal/mol |
289 300@LB@ | |@LB@5'-UUG...AAAGU U -3'@LB@ GUU UUCCAUG@LB@ |:| |||||||@LB@ CGA AAGGUAC@LB@3'-UUU...GUCUU U CGCAA...GAA-5'@LB@ | |@LB@ 30 18@LB@@LB@@LB@Energy -4.42 kcal/mol@LB@Hybridization Energy -10.2082 kcal/mol@LB@Unfolding Energy - mRNA 1.1238 kcal/mol@LB@Unfolding Energy - sRNA 4.66719 kcal/mol@LB@@LB@Position - mRNA 290 -- 300@LB@Position - sRNA 19 -- 29@LB@Position Seed - mRNA 294 -- 300@LB@Position Seed - sRNA 19 -- 25@LB@ |
73 |
0.02714 |
0.29 |
ct_211 |
N/A |
-9.30 |
0.041995 |
126 -- 170 |
20 -- 59 |
|
|
_____________125____________________________________________171\n_____________|______________________________________________|\n5'-AGA...UCAAG_____AUUCU_______AAGUC____UUUGAU_________C____ACGAA...UUU-3'\n______________CCCCU_____CUGUGUG_____CAUU_______GAAGCUAU_CCAU\n______________||||:_____||||||:_____||:|_______||||||||_||||\n______________GGGGG_____GACACAU_____GUGA_______CUUCGAUA_GGUA\n3'-UUU...CUGAA_________________GUUU_____UCUCAGU________A____CCGCA...GAA-5'\n_____________|______________________________________________|\n_____________60_____________________________________________19\n |
159 -- 165 |
25 -- 31 |
-32.2967 kcal/mol |
9.12092 kcal/mol |
13.8789 kcal/mol |
125 171@LB@ | |@LB@5'-AGA...UCAAG AUUCU AAGUC UUUGAU C ACGAA...UUU-3'@LB@ CCCCU CUGUGUG CAUU GAAGCUAU CCAU@LB@ ||||: ||||||: ||:| |||||||| ||||@LB@ GGGGG GACACAU GUGA CUUCGAUA GGUA@LB@3'-UUU...CUGAA GUUU UCUCAGU A CCGCA...GAA-5'@LB@ | |@LB@ 60 19@LB@@LB@@LB@Energy -9.30 kcal/mol@LB@Hybridization Energy -32.2967 kcal/mol@LB@Unfolding Energy - mRNA 9.12092 kcal/mol@LB@Unfolding Energy - sRNA 13.8789 kcal/mol@LB@@LB@Position - mRNA 126 -- 170@LB@Position - sRNA 20 -- 59@LB@Position Seed - mRNA 159 -- 165@LB@Position Seed - sRNA 25 -- 31@LB@ |
157 |
0.06639 |
0.3424 |
ct_213 |
rpiA |
-7.48 |
0.112460 |
245 -- 274 |
28 -- 57 |
ribose-5-phosphate isomerase A |
|
_____________244____________________________275\n_____________|______________________________|\n5'-GAA...UUUUU____AUCAA_____A_____C_C_______AGUAG...UGU-3'\n______________CCCU_____GCAGA_ACUAG_G_UAGAGGC\n______________|||:_____:||:|_|||||_|_:|||:||\n______________GGGG_____UGUUU_UGAUC_C_GUCUUCG\n3'-UUU...GAAGG____ACACA_____G_____U_A_______AUAAG...GAA-5'\n_____________|______________________________|\n_____________58_____________________________27\n |
268 -- 274 |
28 -- 34 |
-25.4315 kcal/mol |
5.87242 kcal/mol |
12.0748 kcal/mol |
244 275@LB@ | |@LB@5'-GAA...UUUUU AUCAA A C C AGUAG...UGU-3'@LB@ CCCU GCAGA ACUAG G UAGAGGC@LB@ |||: :||:| ||||| | :|||:||@LB@ GGGG UGUUU UGAUC C GUCUUCG@LB@3'-UUU...GAAGG ACACA G U A AUAAG...GAA-5'@LB@ | |@LB@ 58 27@LB@@LB@@LB@Energy -7.48 kcal/mol@LB@Hybridization Energy -25.4315 kcal/mol@LB@Unfolding Energy - mRNA 5.87242 kcal/mol@LB@Unfolding Energy - sRNA 12.0748 kcal/mol@LB@@LB@Position - mRNA 245 -- 274@LB@Position - sRNA 28 -- 57@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 28 -- 34@LB@ |
86 |
0.03096 |
0.29 |
ct_221 |
yqfU |
-7.15 |
0.133289 |
38 -- 44 |
80 -- 86 |
|
|
_____________37______45\n_____________|_______|\n5'-AUA...GCUCA_______GAGCA...GUG-3'\n______________GCGGUUA\n______________:|||:||\n______________UGCCGAU\n3'-UUU...CUCUA_______UGAGG...GAA-5'\n_____________|_______|\n_____________87______79\n |
38 -- 44 |
80 -- 86 |
-8.46136 kcal/mol |
0.243281 kcal/mol |
1.06449 kcal/mol |
37 45@LB@ | |@LB@5'-AUA...GCUCA GAGCA...GUG-3'@LB@ GCGGUUA@LB@ :|||:||@LB@ UGCCGAU@LB@3'-UUU...CUCUA UGAGG...GAA-5'@LB@ | |@LB@ 87 79@LB@@LB@@LB@Energy -7.15 kcal/mol@LB@Hybridization Energy -8.46136 kcal/mol@LB@Unfolding Energy - mRNA 0.243281 kcal/mol@LB@Unfolding Energy - sRNA 1.06449 kcal/mol@LB@@LB@Position - mRNA 38 -- 44@LB@Position - sRNA 80 -- 86@LB@Position Seed - mRNA 38 -- 44@LB@Position Seed - sRNA 80 -- 86@LB@ |
117 |
0.04834 |
0.3262 |
ct_237 |
fabG |
-8.76 |
0.056710 |
143 -- 164 |
34 -- 58 |
3-oxoacyl-[acyl-carrier-protein] reductase |
|
_____________142________________________165\n_____________|__________________________|\n5'-CGU...GAGUU_________________U________UAUGG...AUG-3'\n______________CCCCUUGU____AAACA_UUAGGGUC\n______________||||:|||____|||||_:|||:|||\n______________GGGGGACA____UUUGU_GAUCUCAG\n3'-UUU...UGAAG________CAUG______________UCUUC...GAA-5'\n_____________|__________________________|\n_____________59_________________________33\n |
144 -- 150 |
51 -- 57 |
-24.3621 kcal/mol |
7.62467 kcal/mol |
7.97757 kcal/mol |
142 165@LB@ | |@LB@5'-CGU...GAGUU U UAUGG...AUG-3'@LB@ CCCCUUGU AAACA UUAGGGUC@LB@ ||||:||| ||||| :|||:|||@LB@ GGGGGACA UUUGU GAUCUCAG@LB@3'-UUU...UGAAG CAUG UCUUC...GAA-5'@LB@ | |@LB@ 59 33@LB@@LB@@LB@Energy -8.76 kcal/mol@LB@Hybridization Energy -24.3621 kcal/mol@LB@Unfolding Energy - mRNA 7.62467 kcal/mol@LB@Unfolding Energy - sRNA 7.97757 kcal/mol@LB@@LB@Position - mRNA 143 -- 164@LB@Position - sRNA 34 -- 58@LB@Position Seed - mRNA 144 -- 150@LB@Position Seed - sRNA 51 -- 57@LB@ |
147 |
0.05913 |
0.3307 |
ct_243 |
lpxD |
-5.18 |
0.335797 |
179 -- 192 |
18 -- 32 |
UDP-3-O-acylglucosamine N-acyltransferase |
|
_____________178_____________193\n_____________|_______________|\n5'-UCA...CAUGC_______G____A__AGUGC...UCG-3'\n______________GAAGCUA__CCG_GG\n______________|||||||__||:_||\n______________CUUCGAU__GGU_CC\n3'-UUU...UCAGU_______AA___A__GCAAU...GAA-5'\n_____________|_______________|\n_____________33______________17\n |
179 -- 185 |
26 -- 32 |
-15.005 kcal/mol |
4.85774 kcal/mol |
4.96566 kcal/mol |
178 193@LB@ | |@LB@5'-UCA...CAUGC G A AGUGC...UCG-3'@LB@ GAAGCUA CCG GG@LB@ ||||||| ||: ||@LB@ CUUCGAU GGU CC@LB@3'-UUU...UCAGU AA A GCAAU...GAA-5'@LB@ | |@LB@ 33 17@LB@@LB@@LB@Energy -5.18 kcal/mol@LB@Hybridization Energy -15.005 kcal/mol@LB@Unfolding Energy - mRNA 4.85774 kcal/mol@LB@Unfolding Energy - sRNA 4.96566 kcal/mol@LB@@LB@Position - mRNA 179 -- 192@LB@Position - sRNA 18 -- 32@LB@Position Seed - mRNA 179 -- 185@LB@Position Seed - sRNA 26 -- 32@LB@ |