| 25 |
0.0002079 |
0.02926 |
b4064 |
ghxP |
-13.58 |
0.046769 |
115 -- 151 |
38 -- 73 |
guanine/hypoxanthine permease high affinity; guanine/hypoxanthine:H+ symporter |
|
_____________114____________________________________152\n_____________|______________________________________|\n5'-UCG...CAAAC___GA_____G__GAUAAC________GG_________GUCCG...UAA-3'\n______________CUG___GCAG_AA______GUUUCGCU__CAGGGGAUU\n______________||:___:|||_||______|||||:||__|||||||||\n______________GAU___UGUC_UU______CAAAGUGA__GUCCCCUAA\n3'-UUU...UUUCU___GUG____G__AAGCAA___________________AGGUA...GCA-5'\n_____________|______________________________________|\n_____________74_____________________________________37\n |
145 -- 151 |
38 -- 44 |
-32.2199 kcal/mol |
13.8672 kcal/mol |
4.77333 kcal/mol |
114 152@LB@ | |@LB@5'-UCG...CAAAC GA G GAUAAC GG GUCCG...UAA-3'@LB@ CUG GCAG AA GUUUCGCU CAGGGGAUU@LB@ ||: :||| || |||||:|| |||||||||@LB@ GAU UGUC UU CAAAGUGA GUCCCCUAA@LB@3'-UUU...UUUCU GUG G AAGCAA AGGUA...GCA-5'@LB@ | |@LB@ 74 37@LB@@LB@@LB@Energy -13.58 kcal/mol@LB@Hybridization Energy -32.2199 kcal/mol@LB@Unfolding Energy - mRNA 13.8672 kcal/mol@LB@Unfolding Energy - sRNA 4.77333 kcal/mol@LB@@LB@Position - mRNA 115 -- 151@LB@Position - sRNA 38 -- 73@LB@Position Seed - mRNA 145 -- 151@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 198 |
0.01016 |
0.1776 |
b1764 |
selD |
-10.66 |
0.187945 |
118 -- 146 |
45 -- 71 |
selenophosphate synthase |
|
_____________117___________________________147\n_____________|_____________________________|\n5'-UUU...AGCAA_G______G_____AGACACUC_______UCACU...AGC-3'\n______________A_GCGCAG_AAUUC________UCACUUA\n______________|_:|:|||_|||||________|||||:|\n______________U_UGUGUC_UUAAG________AGUGAGU\n3'-UUU...UCUGA_G______G_____CAACAA_________CCCCU...GCA-5'\n_____________|_____________________________|\n_____________72____________________________44\n |
140 -- 146 |
45 -- 51 |
-20.1282 kcal/mol |
5.75637 kcal/mol |
3.71323 kcal/mol |
117 147@LB@ | |@LB@5'-UUU...AGCAA G G AGACACUC UCACU...AGC-3'@LB@ A GCGCAG AAUUC UCACUUA@LB@ | :|:||| ||||| |||||:|@LB@ U UGUGUC UUAAG AGUGAGU@LB@3'-UUU...UCUGA G G CAACAA CCCCU...GCA-5'@LB@ | |@LB@ 72 44@LB@@LB@@LB@Energy -10.66 kcal/mol@LB@Hybridization Energy -20.1282 kcal/mol@LB@Unfolding Energy - mRNA 5.75637 kcal/mol@LB@Unfolding Energy - sRNA 3.71323 kcal/mol@LB@@LB@Position - mRNA 118 -- 146@LB@Position - sRNA 45 -- 71@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 45 -- 51@LB@ |
| 6 |
1.32e-05 |
0.00774 |
b0475 |
hemH |
-21.46 |
0.000115 |
123 -- 162 |
34 -- 75 |
ferrochelatase |
|
_____________122__________________________________________163\n_____________|____________________________________________|\n5'-CGG...GAUUU___CU_U__________A___CUUC________CU_________CUACA...GCG-3'\n______________GAC__C_CACAGCAAUU_GUU____UUC_CUCA_____UUUCCG\n______________|||__|_||||||||||_|||____|||_||||_____|||||:\n______________CUG__G_GUGUCGUUAA_CAA____AAG_GAGU_____AAAGGU\n3'-UUU...CGUUU___AU_U__________G___CA_____U____CCCCU______ACGAA...GCA-5'\n_____________|____________________________________________|\n_____________76___________________________________________33\n |
133 -- 139 |
59 -- 65 |
-29.8744 kcal/mol |
3.60304 kcal/mol |
4.816 kcal/mol |
122 163@LB@ | |@LB@5'-CGG...GAUUU CU U A CUUC CU CUACA...GCG-3'@LB@ GAC C CACAGCAAUU GUU UUC CUCA UUUCCG@LB@ ||| | |||||||||| ||| ||| |||| |||||:@LB@ CUG G GUGUCGUUAA CAA AAG GAGU AAAGGU@LB@3'-UUU...CGUUU AU U G CA U CCCCU ACGAA...GCA-5'@LB@ | |@LB@ 76 33@LB@@LB@@LB@Energy -21.46 kcal/mol@LB@Hybridization Energy -29.8744 kcal/mol@LB@Unfolding Energy - mRNA 3.60304 kcal/mol@LB@Unfolding Energy - sRNA 4.816 kcal/mol@LB@@LB@Position - mRNA 123 -- 162@LB@Position - sRNA 34 -- 75@LB@Position Seed - mRNA 133 -- 139@LB@Position Seed - sRNA 59 -- 65@LB@ |
| 177 |
0.008834 |
0.1747 |
b0932 |
pepN |
-9.31 |
0.316043 |
123 -- 145 |
58 -- 78 |
aminopeptidase N |
|
_____________122_____________________146\n_____________|_______________________|\n5'-GUA...AAGAU_____UU_______GC_______ACGCA...AGA-3'\n______________GAAGA__CUGCAUA__GCGAUUU\n______________:||||__||:||:|__||:|||:\n______________UUUCU__GAUGUGU__CGUUAAG\n3'-UUU...ACCCG______________GU_______CAACA...GCA-5'\n_____________|_______________________|\n_____________79______________________57\n |
139 -- 145 |
58 -- 64 |
-18.0038 kcal/mol |
5.38317 kcal/mol |
3.31018 kcal/mol |
122 146@LB@ | |@LB@5'-GUA...AAGAU UU GC ACGCA...AGA-3'@LB@ GAAGA CUGCAUA GCGAUUU@LB@ :|||| ||:||:| ||:|||:@LB@ UUUCU GAUGUGU CGUUAAG@LB@3'-UUU...ACCCG GU CAACA...GCA-5'@LB@ | |@LB@ 79 57@LB@@LB@@LB@Energy -9.31 kcal/mol@LB@Hybridization Energy -18.0038 kcal/mol@LB@Unfolding Energy - mRNA 5.38317 kcal/mol@LB@Unfolding Energy - sRNA 3.31018 kcal/mol@LB@@LB@Position - mRNA 123 -- 145@LB@Position - sRNA 58 -- 78@LB@Position Seed - mRNA 139 -- 145@LB@Position Seed - sRNA 58 -- 64@LB@ |
| 168 |
0.008282 |
0.1723 |
b3822 |
recQ |
-12.50 |
0.081546 |
124 -- 155 |
43 -- 77 |
ATP-dependent DNA helicase |
|
_____________123___________________________________156\n_____________|_____________________________________|\n5'-CGC...UCUCA_______AAA____U_______C_________G____CGCUG...UUA-3'\n______________GAGACUA___GCAU_GCAGUUU______UCGC_CAGG\n______________:||||||___:||:_|||:||:______||:|_||||\n______________UUCUGAU___UGUG_CGUUAAG______AGUG_GUCC\n3'-UUU...CCCGU_______G______U_______CAACAA____A____CCUAA...GCA-5'\n_____________|_____________________________________|\n_____________78____________________________________42\n |
139 -- 145 |
58 -- 64 |
-25.7534 kcal/mol |
8.90299 kcal/mol |
4.3531 kcal/mol |
123 156@LB@ | |@LB@5'-CGC...UCUCA AAA U C G CGCUG...UUA-3'@LB@ GAGACUA GCAU GCAGUUU UCGC CAGG@LB@ :|||||| :||: |||:||: ||:| ||||@LB@ UUCUGAU UGUG CGUUAAG AGUG GUCC@LB@3'-UUU...CCCGU G U CAACAA A CCUAA...GCA-5'@LB@ | |@LB@ 78 42@LB@@LB@@LB@Energy -12.50 kcal/mol@LB@Hybridization Energy -25.7534 kcal/mol@LB@Unfolding Energy - mRNA 8.90299 kcal/mol@LB@Unfolding Energy - sRNA 4.3531 kcal/mol@LB@@LB@Position - mRNA 124 -- 155@LB@Position - sRNA 43 -- 77@LB@Position Seed - mRNA 139 -- 145@LB@Position Seed - sRNA 58 -- 64@LB@ |
| 145 |
0.006641 |
0.1605 |
b3316 |
rpsS |
-10.41 |
0.208024 |
125 -- 141 |
61 -- 77 |
30S ribosomal subunit protein S19 |
|
_____________124_______________142\n_____________|_________________|\n5'-GCG...AAGGU____AG__C________CAAGC...CUU-3'\n______________AAGA__AC_CGCAGCAA\n______________||||__||_|:||||||\n______________UUCU__UG_GUGUCGUU\n3'-UUU...CCCGU____GA__U________AAGCA...GCA-5'\n_____________|_________________|\n_____________78________________60\n |
135 -- 141 |
61 -- 67 |
-16.0034 kcal/mol |
2.33428 kcal/mol |
3.25748 kcal/mol |
124 142@LB@ | |@LB@5'-GCG...AAGGU AG C CAAGC...CUU-3'@LB@ AAGA AC CGCAGCAA@LB@ |||| || |:||||||@LB@ UUCU UG GUGUCGUU@LB@3'-UUU...CCCGU GA U AAGCA...GCA-5'@LB@ | |@LB@ 78 60@LB@@LB@@LB@Energy -10.41 kcal/mol@LB@Hybridization Energy -16.0034 kcal/mol@LB@Unfolding Energy - mRNA 2.33428 kcal/mol@LB@Unfolding Energy - sRNA 3.25748 kcal/mol@LB@@LB@Position - mRNA 125 -- 141@LB@Position - sRNA 61 -- 77@LB@Position Seed - mRNA 135 -- 141@LB@Position Seed - sRNA 61 -- 67@LB@ |
| 28 |
0.0004009 |
0.04965 |
b3511 |
hdeD |
-17.16 |
0.005105 |
126 -- 176 |
35 -- 75 |
acid-resistance membrane protein |
|
_____________125__________________________________________________177\n_____________|____________________________________________________|\n5'-GAG...AAAUC________U_UUA__CG________G__AUAGAUUGAUAG____________UUCUU...UCG-3'\n______________GACUGCAU_C___GA__CGUU_UUU_GC____________CAGGGGAUUUUC\n______________||||:||:_|___:|__||||_|||_:|____________||||||||||:|\n______________CUGAUGUG_G___UU__GCAA_AAA_UG____________GUCCCCUAAAGG\n3'-UUU...CGUUU________U_UCG__AA____C___G__A_______________________UACGA...GCA-5'\n_____________|____________________________________________________|\n_____________76___________________________________________________34\n |
170 -- 176 |
35 -- 41 |
-34.0299 kcal/mol |
12.0619 kcal/mol |
4.80541 kcal/mol |
125 177@LB@ | |@LB@5'-GAG...AAAUC U UUA CG G AUAGAUUGAUAG UUCUU...UCG-3'@LB@ GACUGCAU C GA CGUU UUU GC CAGGGGAUUUUC@LB@ ||||:||: | :| |||| ||| :| ||||||||||:|@LB@ CUGAUGUG G UU GCAA AAA UG GUCCCCUAAAGG@LB@3'-UUU...CGUUU U UCG AA C G A UACGA...GCA-5'@LB@ | |@LB@ 76 34@LB@@LB@@LB@Energy -17.16 kcal/mol@LB@Hybridization Energy -34.0299 kcal/mol@LB@Unfolding Energy - mRNA 12.0619 kcal/mol@LB@Unfolding Energy - sRNA 4.80541 kcal/mol@LB@@LB@Position - mRNA 126 -- 176@LB@Position - sRNA 35 -- 75@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 35 -- 41@LB@ |
| 128 |
0.005802 |
0.1577 |
b2889 |
idi |
-10.08 |
0.237455 |
129 -- 166 |
33 -- 74 |
isopentenyl diphosphate isomerase |
|
_____________128________________________________________167\n_____________|__________________________________________|\n5'-CUC...UAAAC_______UU___UAA__A___________UUCAAUUA_____AAUGA...UCG-3'\n______________GCU_CAC__GGU___UC____UUUCACUC________UCUAU\n______________:||_|||__:|:___||____||||||||________||:||\n______________UGA_GUG__UCG___AG____AAAGUGAG________AGGUA\n3'-UUU...GUUUC___U___UG___UUA__CAAC________UCCCCUAA_____CGAAU...GCA-5'\n_____________|__________________________________________|\n_____________75_________________________________________32\n |
147 -- 153 |
46 -- 52 |
-18.0124 kcal/mol |
3.11816 kcal/mol |
4.81602 kcal/mol |
128 167@LB@ | |@LB@5'-CUC...UAAAC UU UAA A UUCAAUUA AAUGA...UCG-3'@LB@ GCU CAC GGU UC UUUCACUC UCUAU@LB@ :|| ||| :|: || |||||||| ||:||@LB@ UGA GUG UCG AG AAAGUGAG AGGUA@LB@3'-UUU...GUUUC U UG UUA CAAC UCCCCUAA CGAAU...GCA-5'@LB@ | |@LB@ 75 32@LB@@LB@@LB@Energy -10.08 kcal/mol@LB@Hybridization Energy -18.0124 kcal/mol@LB@Unfolding Energy - mRNA 3.11816 kcal/mol@LB@Unfolding Energy - sRNA 4.81602 kcal/mol@LB@@LB@Position - mRNA 129 -- 166@LB@Position - sRNA 33 -- 74@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 46 -- 52@LB@ |
| 27 |
0.0003358 |
0.04376 |
b1784 |
yeaH |
-12.48 |
0.082239 |
130 -- 197 |
41 -- 99 |
UPF0229 family protein |
|
_____________129___________________________________________________________________198\n_____________|_____________________________________________________________________|\n5'-UGU...ACGAC___GAAC______CCUG___A_C_____CAC____GUA_________UGGCAAA___AG___G______CAUAU...CGA-3'\n______________AGC____CGUGGG____AGA_G_GGCAA___AGGC___GCAUACAGU_______UGU__UAC__GGGGG\n______________|||____||||||____|||_|_|||||___||:|___:||:||||:_______|||__:||__:||||\n______________UCG____GCACCC____UCU_C_CCGUU___UCUG___UGUGUGUCG_______ACA__GUG__UCCCC\n_____3'-UUUUUU___GGUA_____________A______________A___________UUAAGCA___AA___AG_____UAAAG...GCA-5'\n_____________|_____________________________________________________________________|\n_____________100___________________________________________________________________40\n |
170 -- 176 |
63 -- 69 |
-48.2653 kcal/mol |
18.2122 kcal/mol |
17.5731 kcal/mol |
129 198@LB@ | |@LB@5'-UGU...ACGAC GAAC CCUG A C CAC GUA UGGCAAA AG G CAUAU...CGA-3'@LB@ AGC CGUGGG AGA G GGCAA AGGC GCAUACAGU UGU UAC GGGGG@LB@ ||| |||||| ||| | ||||| ||:| :||:||||: ||| :|| :||||@LB@ UCG GCACCC UCU C CCGUU UCUG UGUGUGUCG ACA GUG UCCCC@LB@ 3'-UUUUUU GGUA A A UUAAGCA AA AG UAAAG...GCA-5'@LB@ | |@LB@ 100 40@LB@@LB@@LB@Energy -12.48 kcal/mol@LB@Hybridization Energy -48.2653 kcal/mol@LB@Unfolding Energy - mRNA 18.2122 kcal/mol@LB@Unfolding Energy - sRNA 17.5731 kcal/mol@LB@@LB@Position - mRNA 130 -- 197@LB@Position - sRNA 41 -- 99@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 63 -- 69@LB@ |
| 17 |
0.0001292 |
0.02674 |
b1854 |
pykA |
-13.69 |
0.043994 |
133 -- 157 |
36 -- 68 |
pyruvate kinase II |
|
_____________132_______________________________158\n_____________|_________________________________|\n5'-GAA...GCCAU______________A__________________AUGUU...ACG-3'\n______________CGCGGC_____GUU_UUUCAUUC___GGAUUUC\n______________|:|:||_____|||_|||||:||___|||||||\n______________GUGUCG_____CAA_AAAGUGAG___CCUAAAG\n3'-UUU...GAUGU______UUAAG___C________UCC_______GUACG...GCA-5'\n_____________|_________________________________|\n_____________69________________________________35\n |
151 -- 157 |
36 -- 42 |
-24.2432 kcal/mol |
5.79946 kcal/mol |
4.75078 kcal/mol |
132 158@LB@ | |@LB@5'-GAA...GCCAU A AUGUU...ACG-3'@LB@ CGCGGC GUU UUUCAUUC GGAUUUC@LB@ |:|:|| ||| |||||:|| |||||||@LB@ GUGUCG CAA AAAGUGAG CCUAAAG@LB@3'-UUU...GAUGU UUAAG C UCC GUACG...GCA-5'@LB@ | |@LB@ 69 35@LB@@LB@@LB@Energy -13.69 kcal/mol@LB@Hybridization Energy -24.2432 kcal/mol@LB@Unfolding Energy - mRNA 5.79946 kcal/mol@LB@Unfolding Energy - sRNA 4.75078 kcal/mol@LB@@LB@Position - mRNA 133 -- 157@LB@Position - sRNA 36 -- 68@LB@Position Seed - mRNA 151 -- 157@LB@Position Seed - sRNA 36 -- 42@LB@ |
