| 20 |
0.0001757 |
0.02926 |
b4175 |
hflC |
-15.67 |
0.013919 |
175 -- 193 |
40 -- 75 |
HflB protease modulator specific for phage lambda cII repressor |
|
_____________174__________________________________194\n_____________|____________________________________|\n5'-UUA...GUAAC____________________________________AAUAA...GUU-3'\n______________GACUAC___CAGCG______________UCAGGGGG\n______________||||||___||||:______________|||||||:\n______________CUGAUG___GUCGU______________AGUCCCCU\n3'-UUU...CGUUU______UGU_____UAAGCAACAAAGUG________AAAGG...GCA-5'\n_____________|____________________________________|\n_____________76___________________________________39\n |
187 -- 193 |
40 -- 46 |
-24.7611 kcal/mol |
4.31935 kcal/mol |
4.77786 kcal/mol |
174 194@LB@ | |@LB@5'-UUA...GUAAC AAUAA...GUU-3'@LB@ GACUAC CAGCG UCAGGGGG@LB@ |||||| ||||: |||||||:@LB@ CUGAUG GUCGU AGUCCCCU@LB@3'-UUU...CGUUU UGU UAAGCAACAAAGUG AAAGG...GCA-5'@LB@ | |@LB@ 76 39@LB@@LB@@LB@Energy -15.67 kcal/mol@LB@Hybridization Energy -24.7611 kcal/mol@LB@Unfolding Energy - mRNA 4.31935 kcal/mol@LB@Unfolding Energy - sRNA 4.77786 kcal/mol@LB@@LB@Position - mRNA 175 -- 193@LB@Position - sRNA 40 -- 75@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 40 -- 46@LB@ |
| 12 |
9.939e-05 |
0.0245 |
b2308 |
hisQ |
-13.21 |
0.056865 |
186 -- 218 |
34 -- 75 |
histidine ABC transporter permease |
|
_____________185__________________________________________219\n_____________|____________________________________________|\n5'-GAU...CACAC___AGG___G_______________AU_________________GGUGU...UUG-3'\n______________GAC___ACA_GCAGCA___UGUUGU__________GGGUUUUCA\n______________|||___|||_:|||||___:|||||__________||:|||:||\n______________CUG___UGU_UGUCGU___GCAACA__________CCUAAAGGU\n3'-UUU...CGUUU___A_____G______UAA______AAGUGAGUCC_________ACGAA...GCA-5'\n_____________|____________________________________________|\n_____________76___________________________________________33\n |
212 -- 218 |
34 -- 40 |
-26.3199 kcal/mol |
8.29445 kcal/mol |
4.816 kcal/mol |
185 219@LB@ | |@LB@5'-GAU...CACAC AGG G AU GGUGU...UUG-3'@LB@ GAC ACA GCAGCA UGUUGU GGGUUUUCA@LB@ ||| ||| :||||| :||||| ||:|||:||@LB@ CUG UGU UGUCGU GCAACA CCUAAAGGU@LB@3'-UUU...CGUUU A G UAA AAGUGAGUCC ACGAA...GCA-5'@LB@ | |@LB@ 76 33@LB@@LB@@LB@Energy -13.21 kcal/mol@LB@Hybridization Energy -26.3199 kcal/mol@LB@Unfolding Energy - mRNA 8.29445 kcal/mol@LB@Unfolding Energy - sRNA 4.816 kcal/mol@LB@@LB@Position - mRNA 186 -- 218@LB@Position - sRNA 34 -- 75@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 34 -- 40@LB@ |
| 38 |
0.0006674 |
0.0618 |
b2069 |
yegD |
-11.14 |
0.153468 |
57 -- 84 |
48 -- 76 |
Hsp70 chaperone family protein |
|
_____________56____________________________85\n_____________|_____________________________|\n5'-CAC...AGUUC___G_______C___UC__CUUA______CCGCU...UGC-3'\n______________AGG_UAUACAU_GCA__UC_____UUCAU\n______________||:_||:|||:_|||__||_____||||:\n______________UCU_AUGUGUG_CGU__AG_____AAGUG\n3'-UUU...CCGUU___G_______U___UA__CAACA_____AGUCC...GCA-5'\n_____________|_____________________________|\n_____________77____________________________47\n |
61 -- 67 |
66 -- 72 |
-18.1339 kcal/mol |
3.31217 kcal/mol |
3.68714 kcal/mol |
56 85@LB@ | |@LB@5'-CAC...AGUUC G C UC CUUA CCGCU...UGC-3'@LB@ AGG UAUACAU GCA UC UUCAU@LB@ ||: ||:|||: ||| || ||||:@LB@ UCU AUGUGUG CGU AG AAGUG@LB@3'-UUU...CCGUU G U UA CAACA AGUCC...GCA-5'@LB@ | |@LB@ 77 47@LB@@LB@@LB@Energy -11.14 kcal/mol@LB@Hybridization Energy -18.1339 kcal/mol@LB@Unfolding Energy - mRNA 3.31217 kcal/mol@LB@Unfolding Energy - sRNA 3.68714 kcal/mol@LB@@LB@Position - mRNA 57 -- 84@LB@Position - sRNA 48 -- 76@LB@Position Seed - mRNA 61 -- 67@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 5 |
9.512e-06 |
0.006694 |
b4006 |
purH |
-17.40 |
0.004319 |
188 -- 204 |
31 -- 46 |
IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase |
|
_____________187_______________205\n_____________|_________________|\n5'-GUA...AAAUC__________A______AACAA...AGC-3'\n______________CAGGGGAUUU_CCAUGC\n______________||||||||||_||||||\n______________GUCCCCUAAA_GGUACG\n3'-UUU...AGUGA_________________AAUAU...GCA-5'\n_____________|_________________|\n_____________47________________30\n |
191 -- 197 |
37 -- 43 |
-27.6893 kcal/mol |
6.33421 kcal/mol |
3.95768 kcal/mol |
187 205@LB@ | |@LB@5'-GUA...AAAUC A AACAA...AGC-3'@LB@ CAGGGGAUUU CCAUGC@LB@ |||||||||| ||||||@LB@ GUCCCCUAAA GGUACG@LB@3'-UUU...AGUGA AAUAU...GCA-5'@LB@ | |@LB@ 47 30@LB@@LB@@LB@Energy -17.40 kcal/mol@LB@Hybridization Energy -27.6893 kcal/mol@LB@Unfolding Energy - mRNA 6.33421 kcal/mol@LB@Unfolding Energy - sRNA 3.95768 kcal/mol@LB@@LB@Position - mRNA 188 -- 204@LB@Position - sRNA 31 -- 46@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 59 |
0.002304 |
0.1363 |
b2508 |
guaB |
-11.36 |
0.139274 |
1 -- 26 |
38 -- 71 |
IMP dehydrogenase |
|
______________1__________________________________27\n______________|__________________________________|\n___________5'-__UA_______AA____________G_________GAGAA...AGC-3'\n______________AC__ACGGUAA___________AUU_CAGGGGAUU\n______________||__||:|:||___________|:|_|||||||||\n______________UG__UGUCGUU___________UGA_GUCCCCUAA\n3'-UUU...UCUGA__UG_______AAGCAACAAAG_____________AGGUA...GCA-5'\n_____________|___________________________________|\n_____________72__________________________________37\n |
20 -- 26 |
38 -- 44 |
-21.1303 kcal/mol |
5.02575 kcal/mol |
4.74986 kcal/mol |
1 27@LB@ | |@LB@ 5'- UA AA G GAGAA...AGC-3'@LB@ AC ACGGUAA AUU CAGGGGAUU@LB@ || ||:|:|| |:| |||||||||@LB@ UG UGUCGUU UGA GUCCCCUAA@LB@3'-UUU...UCUGA UG AAGCAACAAAG AGGUA...GCA-5'@LB@ | |@LB@ 72 37@LB@@LB@@LB@Energy -11.36 kcal/mol@LB@Hybridization Energy -21.1303 kcal/mol@LB@Unfolding Energy - mRNA 5.02575 kcal/mol@LB@Unfolding Energy - sRNA 4.74986 kcal/mol@LB@@LB@Position - mRNA 1 -- 26@LB@Position - sRNA 38 -- 71@LB@Position Seed - mRNA 20 -- 26@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 127 |
0.005686 |
0.1575 |
b1176 |
minC |
-17.54 |
0.003902 |
3 -- 40 |
35 -- 74 |
inhibitor of FtsZ ring polymerization |
|
_____________2________________________________________41\n_____________|________________________________________|\n_________5'-AA_G_____________GG____A__G__A_____U______UAAGC...AAG-3'\n______________A_UACG_ACGGCAAU__GUUG_UU_AC__AGGG_AUUUUU\n______________|_|||:_||:|||||__||||_||_||__||||_||||::\n______________U_AUGU_UGUCGUUA__CAAC_AA_UG__UCCC_UAAAGG\n3'-UUU...GUUUC_G____G________AG____A__G__AG____C______UACGA...GCA-5'\n_____________|________________________________________|\n_____________75_______________________________________34\n |
10 -- 16 |
60 -- 66 |
-29.7113 kcal/mol |
7.37167 kcal/mol |
4.80541 kcal/mol |
2 41@LB@ | |@LB@ 5'-AA G GG A G A U UAAGC...AAG-3'@LB@ A UACG ACGGCAAU GUUG UU AC AGGG AUUUUU@LB@ | |||: ||:||||| |||| || || |||| ||||::@LB@ U AUGU UGUCGUUA CAAC AA UG UCCC UAAAGG@LB@3'-UUU...GUUUC G G AG A G AG C UACGA...GCA-5'@LB@ | |@LB@ 75 34@LB@@LB@@LB@Energy -17.54 kcal/mol@LB@Hybridization Energy -29.7113 kcal/mol@LB@Unfolding Energy - mRNA 7.37167 kcal/mol@LB@Unfolding Energy - sRNA 4.80541 kcal/mol@LB@@LB@Position - mRNA 3 -- 40@LB@Position - sRNA 35 -- 74@LB@Position Seed - mRNA 10 -- 16@LB@Position Seed - sRNA 60 -- 66@LB@ |
| 128 |
0.005802 |
0.1577 |
b2889 |
idi |
-10.08 |
0.237455 |
129 -- 166 |
33 -- 74 |
isopentenyl diphosphate isomerase |
|
_____________128________________________________________167\n_____________|__________________________________________|\n5'-CUC...UAAAC_______UU___UAA__A___________UUCAAUUA_____AAUGA...UCG-3'\n______________GCU_CAC__GGU___UC____UUUCACUC________UCUAU\n______________:||_|||__:|:___||____||||||||________||:||\n______________UGA_GUG__UCG___AG____AAAGUGAG________AGGUA\n3'-UUU...GUUUC___U___UG___UUA__CAAC________UCCCCUAA_____CGAAU...GCA-5'\n_____________|__________________________________________|\n_____________75_________________________________________32\n |
147 -- 153 |
46 -- 52 |
-18.0124 kcal/mol |
3.11816 kcal/mol |
4.81602 kcal/mol |
128 167@LB@ | |@LB@5'-CUC...UAAAC UU UAA A UUCAAUUA AAUGA...UCG-3'@LB@ GCU CAC GGU UC UUUCACUC UCUAU@LB@ :|| ||| :|: || |||||||| ||:||@LB@ UGA GUG UCG AG AAAGUGAG AGGUA@LB@3'-UUU...GUUUC U UG UUA CAAC UCCCCUAA CGAAU...GCA-5'@LB@ | |@LB@ 75 32@LB@@LB@@LB@Energy -10.08 kcal/mol@LB@Hybridization Energy -18.0124 kcal/mol@LB@Unfolding Energy - mRNA 3.11816 kcal/mol@LB@Unfolding Energy - sRNA 4.81602 kcal/mol@LB@@LB@Position - mRNA 129 -- 166@LB@Position - sRNA 33 -- 74@LB@Position Seed - mRNA 147 -- 153@LB@Position Seed - sRNA 46 -- 52@LB@ |
| 200 |
0.01028 |
0.1776 |
b2803 |
fucK |
-15.72 |
0.013449 |
16 -- 30 |
62 -- 76 |
L-fuculokinase |
|
_____________15______________31\n_____________|_______________|\n5'-AUC...UGCCU_______________UGGAU...CGC-3'\n______________GGGCUGCGCACGGCA\n______________:|:||:|:|||:|||\n______________UCUGAUGUGUGUCGU\n3'-UUU...CCGUU_______________UAAGC...GCA-5'\n_____________|_______________|\n_____________77______________61\n |
24 -- 30 |
62 -- 68 |
-24.6836 kcal/mol |
5.71098 kcal/mol |
3.25371 kcal/mol |
15 31@LB@ | |@LB@5'-AUC...UGCCU UGGAU...CGC-3'@LB@ GGGCUGCGCACGGCA@LB@ :|:||:|:|||:|||@LB@ UCUGAUGUGUGUCGU@LB@3'-UUU...CCGUU UAAGC...GCA-5'@LB@ | |@LB@ 77 61@LB@@LB@@LB@Energy -15.72 kcal/mol@LB@Hybridization Energy -24.6836 kcal/mol@LB@Unfolding Energy - mRNA 5.71098 kcal/mol@LB@Unfolding Energy - sRNA 3.25371 kcal/mol@LB@@LB@Position - mRNA 16 -- 30@LB@Position - sRNA 62 -- 76@LB@Position Seed - mRNA 24 -- 30@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 68 |
0.002787 |
0.1417 |
b3001 |
gpr |
-15.31 |
0.017381 |
36 -- 59 |
44 -- 69 |
L-glyceraldehyde 3-phosphate reductase |
|
_____________35__________________________60\n_____________|___________________________|\n5'-UCC...GUUAA________________CAC________UUGGU...GGC-3'\n______________ACGCGGCA__UCGUUG___UC_CUCAG\n______________||:|:|||__||||||___||_|||||\n______________UGUGUCGU__AGCAAC___AG_GAGUC\n3'-UUU...UGAUG________UA______AA___U_____CCCUA...GCA-5'\n_____________|___________________________|\n_____________70__________________________43\n |
37 -- 43 |
62 -- 68 |
-25.5933 kcal/mol |
6.1914 kcal/mol |
4.09554 kcal/mol |
35 60@LB@ | |@LB@5'-UCC...GUUAA CAC UUGGU...GGC-3'@LB@ ACGCGGCA UCGUUG UC CUCAG@LB@ ||:|:||| |||||| || |||||@LB@ UGUGUCGU AGCAAC AG GAGUC@LB@3'-UUU...UGAUG UA AA U CCCUA...GCA-5'@LB@ | |@LB@ 70 43@LB@@LB@@LB@Energy -15.31 kcal/mol@LB@Hybridization Energy -25.5933 kcal/mol@LB@Unfolding Energy - mRNA 6.1914 kcal/mol@LB@Unfolding Energy - sRNA 4.09554 kcal/mol@LB@@LB@Position - mRNA 36 -- 59@LB@Position - sRNA 44 -- 69@LB@Position Seed - mRNA 37 -- 43@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 102 |
0.004593 |
0.1538 |
b0343 |
lacY |
-16.22 |
0.009713 |
12 -- 55 |
39 -- 78 |
lactose permease |
|
_____________11___________________________________________56\n_____________|____________________________________________|\n5'-UGC...ACGCG_____AG_________UG___A___ACG_____CA_AU______UGGUG...GGC-3'\n______________GAAGA__GCACAUGGC__AAU_UCG___GUUUC__U__GGGGAU\n______________:||||__:||||::||__|||_|||___|||||__|__||||||\n______________UUUCU__UGUGUGUCG__UUA_AGC___CAAAG__A__CCCCUA\n3'-UUU...ACCCG_____GA__________________AA______UG_GU______AAGGU...GCA-5'\n_____________|____________________________________________|\n_____________79___________________________________________38\n |
21 -- 27 |
63 -- 69 |
-31.4377 kcal/mol |
10.4352 kcal/mol |
4.77966 kcal/mol |
11 56@LB@ | |@LB@5'-UGC...ACGCG AG UG A ACG CA AU UGGUG...GGC-3'@LB@ GAAGA GCACAUGGC AAU UCG GUUUC U GGGGAU@LB@ :|||| :||||::|| ||| ||| ||||| | ||||||@LB@ UUUCU UGUGUGUCG UUA AGC CAAAG A CCCCUA@LB@3'-UUU...ACCCG GA AA UG GU AAGGU...GCA-5'@LB@ | |@LB@ 79 38@LB@@LB@@LB@Energy -16.22 kcal/mol@LB@Hybridization Energy -31.4377 kcal/mol@LB@Unfolding Energy - mRNA 10.4352 kcal/mol@LB@Unfolding Energy - sRNA 4.77966 kcal/mol@LB@@LB@Position - mRNA 12 -- 55@LB@Position - sRNA 39 -- 78@LB@Position Seed - mRNA 21 -- 27@LB@Position Seed - sRNA 63 -- 69@LB@ |
