| 123 |
0.004171 |
0.1178 |
b2989 |
yghU |
-8.31 |
0.130595 |
46 -- 54 |
49 -- 57 |
putative S-transferase |
|
_____________45________55\n_____________|_________|\n5'-UUA...UGUGC_________CUGCU...CGC-3'\n______________UCUGAUUAC\n______________||:||||||\n______________AGGCUAAUG\n3'-AUU...GGUUU_________CACUU...AUG-5'\n_____________|_________|\n_____________58________48\n |
48 -- 54 |
49 -- 55 |
-9.38135 kcal/mol |
0.766517 kcal/mol |
0.318327 kcal/mol |
45 55@LB@ | |@LB@5'-UUA...UGUGC CUGCU...CGC-3'@LB@ UCUGAUUAC@LB@ ||:||||||@LB@ AGGCUAAUG@LB@3'-AUU...GGUUU CACUU...AUG-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -8.31 kcal/mol@LB@Hybridization Energy -9.38135 kcal/mol@LB@Unfolding Energy - mRNA 0.766517 kcal/mol@LB@Unfolding Energy - sRNA 0.318327 kcal/mol@LB@@LB@Position - mRNA 46 -- 54@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 48 -- 54@LB@Position Seed - sRNA 49 -- 55@LB@ |
| 54 |
0.0007615 |
0.04961 |
b0313 |
betI |
-7.44 |
0.209816 |
47 -- 68 |
32 -- 57 |
choline-inducible betIBA-betT divergent operon transcriptional repressor |
|
_____________46_________________________69\n_____________|__________________________|\n5'-CAG...CCUUU___C________U_____________UCAUC...CGC-3'\n______________UCC___UGC_UG__GUGAAAGGUCUG\n______________|||___|:|_||__||:|||||||||\n______________AGG___AUG_AC__CAUUUUCCAGAC\n3'-AUU...GGUUU___CUA___C__UU____________UUUCU...AUG-5'\n_____________|__________________________|\n_____________58_________________________31\n |
62 -- 68 |
32 -- 38 |
-22.1015 kcal/mol |
6.64828 kcal/mol |
7.92091 kcal/mol |
46 69@LB@ | |@LB@5'-CAG...CCUUU C U UCAUC...CGC-3'@LB@ UCC UGC UG GUGAAAGGUCUG@LB@ ||| |:| || ||:|||||||||@LB@ AGG AUG AC CAUUUUCCAGAC@LB@3'-AUU...GGUUU CUA C UU UUUCU...AUG-5'@LB@ | |@LB@ 58 31@LB@@LB@@LB@Energy -7.44 kcal/mol@LB@Hybridization Energy -22.1015 kcal/mol@LB@Unfolding Energy - mRNA 6.64828 kcal/mol@LB@Unfolding Energy - sRNA 7.92091 kcal/mol@LB@@LB@Position - mRNA 47 -- 68@LB@Position - sRNA 32 -- 57@LB@Position Seed - mRNA 62 -- 68@LB@Position Seed - sRNA 32 -- 38@LB@ |
| 191 |
0.008587 |
0.1558 |
b0823 |
ybiW |
-9.49 |
0.063221 |
47 -- 54 |
1 -- 8 |
putative pyruvate formate lyase |
b3951 |
_____________46_______55\n_____________|________|\n5'-ACC...UUUUC________CACAC...CGC-3'\n______________UGCCCUAC\n______________|:||||||\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
48 -- 54 |
1 -- 7 |
-12.4662 kcal/mol |
0.878635 kcal/mol |
2.11603 kcal/mol |
46 55@LB@ | |@LB@5'-ACC...UUUUC CACAC...CGC-3'@LB@ UGCCCUAC@LB@ |:||||||@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -9.49 kcal/mol@LB@Hybridization Energy -12.4662 kcal/mol@LB@Unfolding Energy - mRNA 0.878635 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 47 -- 54@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 48 -- 54@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 40 |
0.0004513 |
0.03766 |
b3291 |
mscL |
-6.99 |
0.263134 |
48 -- 58 |
55 -- 65 |
mechanosensitive channel protein high conductance |
|
_____________47__________59\n_____________|___________|\n5'-UGU...UCUUC________C__UUUCU...UCU-3'\n______________CAGCCAAG_CC\n______________|||||||:_||\n______________GUCGGUUU_GG\n3'-AUU...UAUAA________A__CUAAU...AUG-5'\n_____________|___________|\n_____________66__________54\n |
49 -- 55 |
58 -- 64 |
-14.9389 kcal/mol |
1.90813 kcal/mol |
6.05961 kcal/mol |
47 59@LB@ | |@LB@5'-UGU...UCUUC C UUUCU...UCU-3'@LB@ CAGCCAAG CC@LB@ |||||||: ||@LB@ GUCGGUUU GG@LB@3'-AUU...UAUAA A CUAAU...AUG-5'@LB@ | |@LB@ 66 54@LB@@LB@@LB@Energy -6.99 kcal/mol@LB@Hybridization Energy -14.9389 kcal/mol@LB@Unfolding Energy - mRNA 1.90813 kcal/mol@LB@Unfolding Energy - sRNA 6.05961 kcal/mol@LB@@LB@Position - mRNA 48 -- 58@LB@Position - sRNA 55 -- 65@LB@Position Seed - mRNA 49 -- 55@LB@Position Seed - sRNA 58 -- 64@LB@ |
| 64 |
0.001083 |
0.05856 |
b3471 |
yhhQ |
-11.41 |
0.016564 |
49 -- 60 |
44 -- 55 |
DUF165 family inner membrane protein |
|
_____________48___________61\n_____________|____________|\n5'-AAA...GUUAA____________AAUUA...UUC-3'\n______________CGAUUGCGUGAA\n______________|||||:||||||\n______________GCUAAUGCACUU\n3'-AUU...UUUAG____________CAUUU...AUG-5'\n_____________|____________|\n_____________56___________43\n |
54 -- 60 |
44 -- 50 |
-16.5289 kcal/mol |
2.50651 kcal/mol |
2.62518 kcal/mol |
48 61@LB@ | |@LB@5'-AAA...GUUAA AAUUA...UUC-3'@LB@ CGAUUGCGUGAA@LB@ |||||:||||||@LB@ GCUAAUGCACUU@LB@3'-AUU...UUUAG CAUUU...AUG-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -11.41 kcal/mol@LB@Hybridization Energy -16.5289 kcal/mol@LB@Unfolding Energy - mRNA 2.50651 kcal/mol@LB@Unfolding Energy - sRNA 2.62518 kcal/mol@LB@@LB@Position - mRNA 49 -- 60@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 54 -- 60@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 55 |
0.0008105 |
0.05184 |
b3262 |
yhdJ |
-10.49 |
0.032282 |
53 -- 83 |
1 -- 34 |
DNA adenine methyltransferase SAM-dependent |
|
_____________52_________________________________84\n_____________|__________________________________|\n5'-CCU...CUGCG____U____________A____GUG____G____GUAAA...GUG-3'\n______________CUGA__GAU_GGGCAUC__ACC___GUAC_CUGC\n______________||||__|||_|::||||__|||___||||_||:|\n______________GACU__CUA_CUUGUAG__UGG___CAUG_GAUG\n3'-AUU...UUCCA____UU___U_______AA___AGA____G____-5'\n_____________|_________________________________|\n_____________35________________________________1\n |
61 -- 67 |
18 -- 24 |
-29.8286 kcal/mol |
10.2122 kcal/mol |
9.14469 kcal/mol |
52 84@LB@ | |@LB@5'-CCU...CUGCG U A GUG G GUAAA...GUG-3'@LB@ CUGA GAU GGGCAUC ACC GUAC CUGC@LB@ |||| ||| |::|||| ||| |||| ||:|@LB@ GACU CUA CUUGUAG UGG CAUG GAUG@LB@3'-AUU...UUCCA UU U AA AGA G -5'@LB@ | |@LB@ 35 1@LB@@LB@@LB@Energy -10.49 kcal/mol@LB@Hybridization Energy -29.8286 kcal/mol@LB@Unfolding Energy - mRNA 10.2122 kcal/mol@LB@Unfolding Energy - sRNA 9.14469 kcal/mol@LB@@LB@Position - mRNA 53 -- 83@LB@Position - sRNA 1 -- 34@LB@Position Seed - mRNA 61 -- 67@LB@Position Seed - sRNA 18 -- 24@LB@ |
| 79 |
0.001698 |
0.07533 |
b2890 |
lysS |
-8.16 |
0.142186 |
53 -- 64 |
54 -- 65 |
lysine tRNA synthetase constitutive |
b4129 |
_____________52___________65\n_____________|____________|\n5'-AAA...UGGGG____________UUCUU...GGA-3'\n______________CAGCCAGAUUCG\n______________||||||:||:||\n______________GUCGGUUUAGGC\n3'-AUU...UAUAA____________UAAUG...AUG-5'\n_____________|____________|\n_____________66___________53\n |
58 -- 64 |
54 -- 60 |
-18.439 kcal/mol |
4.14677 kcal/mol |
6.15795 kcal/mol |
52 65@LB@ | |@LB@5'-AAA...UGGGG UUCUU...GGA-3'@LB@ CAGCCAGAUUCG@LB@ ||||||:||:||@LB@ GUCGGUUUAGGC@LB@3'-AUU...UAUAA UAAUG...AUG-5'@LB@ | |@LB@ 66 53@LB@@LB@@LB@Energy -8.16 kcal/mol@LB@Hybridization Energy -18.439 kcal/mol@LB@Unfolding Energy - mRNA 4.14677 kcal/mol@LB@Unfolding Energy - sRNA 6.15795 kcal/mol@LB@@LB@Position - mRNA 53 -- 64@LB@Position - sRNA 54 -- 65@LB@Position Seed - mRNA 58 -- 64@LB@Position Seed - sRNA 54 -- 60@LB@ |
| 167 |
0.00683 |
0.1439 |
b0387 |
yaiI |
-9.54 |
0.061403 |
53 -- 70 |
51 -- 65 |
UPF0178 family protein |
|
_____________52_________________71\n_____________|__________________|\n5'-CAC...UGCCG_______UAAAA______UUCUU...CAA-3'\n______________CAGCCAA_____CCGAUU\n______________|||||||_____||||||\n______________GUCGGUU_____GGCUAA\n3'-AUU...UAUAA_______UA_________UGCAC...AUG-5'\n_____________|__________________|\n_____________66_________________50\n |
53 -- 59 |
59 -- 65 |
-16.8495 kcal/mol |
1.14267 kcal/mol |
6.18987 kcal/mol |
52 71@LB@ | |@LB@5'-CAC...UGCCG UAAAA UUCUU...CAA-3'@LB@ CAGCCAA CCGAUU@LB@ ||||||| ||||||@LB@ GUCGGUU GGCUAA@LB@3'-AUU...UAUAA UA UGCAC...AUG-5'@LB@ | |@LB@ 66 50@LB@@LB@@LB@Energy -9.54 kcal/mol@LB@Hybridization Energy -16.8495 kcal/mol@LB@Unfolding Energy - mRNA 1.14267 kcal/mol@LB@Unfolding Energy - sRNA 6.18987 kcal/mol@LB@@LB@Position - mRNA 53 -- 70@LB@Position - sRNA 51 -- 65@LB@Position Seed - mRNA 53 -- 59@LB@Position Seed - sRNA 59 -- 65@LB@ |
| 141 |
0.00519 |
0.1284 |
b3550 |
yiaC |
-7.29 |
0.227336 |
55 -- 76 |
1 -- 22 |
GNAT family putative N-acetyltransferase |
|
_____________54______________________77\n_____________|_______________________|\n5'-AAU...CAUCU_____C______CGAC_______CUAAG...GGC-3'\n______________ACGUC__GCCUC____GCCCUAU\n______________||:||__:||||____:|||||:\n______________UGUAG__UGGAG____UGGGAUG\n3'-AUU...UAUCU_____AA_____ACA________-5'\n_____________|______________________|\n_____________23_____________________1\n |
70 -- 76 |
1 -- 7 |
-20.6815 kcal/mol |
5.4259 kcal/mol |
7.99236 kcal/mol |
54 77@LB@ | |@LB@5'-AAU...CAUCU C CGAC CUAAG...GGC-3'@LB@ ACGUC GCCUC GCCCUAU@LB@ ||:|| :|||| :|||||:@LB@ UGUAG UGGAG UGGGAUG@LB@3'-AUU...UAUCU AA ACA -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -7.29 kcal/mol@LB@Hybridization Energy -20.6815 kcal/mol@LB@Unfolding Energy - mRNA 5.4259 kcal/mol@LB@Unfolding Energy - sRNA 7.99236 kcal/mol@LB@@LB@Position - mRNA 55 -- 76@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 70 -- 76@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 95 |
0.002686 |
0.09947 |
b2419 |
yfeK |
-12.78 |
0.005552 |
57 -- 65 |
1 -- 9 |
uncharacterized protein |
|
_____________56________66\n_____________|_________|\n5'-GUU...CUGCA_________UCUUA...UGG-3'\n______________GUGCCCUAC\n______________||:||||||\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
59 -- 65 |
1 -- 7 |
-16.152 kcal/mol |
1.26264 kcal/mol |
2.12872 kcal/mol |
56 66@LB@ | |@LB@5'-GUU...CUGCA UCUUA...UGG-3'@LB@ GUGCCCUAC@LB@ ||:||||||@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -12.78 kcal/mol@LB@Hybridization Energy -16.152 kcal/mol@LB@Unfolding Energy - mRNA 1.26264 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 57 -- 65@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 59 -- 65@LB@Position Seed - sRNA 1 -- 7@LB@ |
