23 |
0.0004941 |
0.06638 |
bsu00930 |
cysE |
-16.71 |
0.013304 |
161 -- 195 |
22 -- 53 |
serine acetyltransferase |
|
_____________160_________________________________196\n_____________|___________________________________|\n5'-CCU...UUUUA______AGAG__AA__A_______AAACG______AGCAU...UAC-3'\n______________UUGGGU____GA__UC_GAUAGAG_____GGGGGA\n______________|:||:|____||__||_|||||||_____||||:|\n______________AGCCUA____CU__AG_CUAUCUC_____CCCCUU\n3'-UUU...AAAAA______GAA_______A_______CCCAA______GUCUC...AUA-5'\n_____________|___________________________________|\n_____________54__________________________________21\n |
178 -- 184 |
33 -- 39 |
-24.9399 kcal/mol |
6.34776 kcal/mol |
1.88616 kcal/mol |
160 196@LB@ | |@LB@5'-CCU...UUUUA AGAG AA A AAACG AGCAU...UAC-3'@LB@ UUGGGU GA UC GAUAGAG GGGGGA@LB@ |:||:| || || ||||||| ||||:|@LB@ AGCCUA CU AG CUAUCUC CCCCUU@LB@3'-UUU...AAAAA GAA A CCCAA GUCUC...AUA-5'@LB@ | |@LB@ 54 21@LB@@LB@@LB@Energy -16.71 kcal/mol@LB@Hybridization Energy -24.9399 kcal/mol@LB@Unfolding Energy - mRNA 6.34776 kcal/mol@LB@Unfolding Energy - sRNA 1.88616 kcal/mol@LB@@LB@Position - mRNA 161 -- 195@LB@Position - sRNA 22 -- 53@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 33 -- 39@LB@ |
24 |
0.0005065 |
0.06638 |
bsu23150 |
resA |
-19.55 |
0.002768 |
169 -- 191 |
24 -- 44 |
thiol-disulfide oxidoreductase ResA |
|
_____________168_____________________192\n_____________|_______________________|\n5'-GUU...GAAUG______CA________AAG____CAGUG...AAG-3'\n______________GAUCUG__AUAGGGGG___GGGG\n______________||||||__||||:|||___||||\n______________CUAGAC__UAUCUCCC___CCCC\n3'-UUU...UAGAA________________CAA____UUGUC...AUA-5'\n_____________|_______________________|\n_____________45______________________23\n |
178 -- 184 |
31 -- 37 |
-27.4404 kcal/mol |
6.91177 kcal/mol |
0.977523 kcal/mol |
168 192@LB@ | |@LB@5'-GUU...GAAUG CA AAG CAGUG...AAG-3'@LB@ GAUCUG AUAGGGGG GGGG@LB@ |||||| ||||:||| ||||@LB@ CUAGAC UAUCUCCC CCCC@LB@3'-UUU...UAGAA CAA UUGUC...AUA-5'@LB@ | |@LB@ 45 23@LB@@LB@@LB@Energy -19.55 kcal/mol@LB@Hybridization Energy -27.4404 kcal/mol@LB@Unfolding Energy - mRNA 6.91177 kcal/mol@LB@Unfolding Energy - sRNA 0.977523 kcal/mol@LB@@LB@Position - mRNA 169 -- 191@LB@Position - sRNA 24 -- 44@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 31 -- 37@LB@ |
25 |
0.0005172 |
0.06638 |
bsu30210 |
bioD |
-10.94 |
0.155183 |
179 -- 210 |
28 -- 53 |
ATP-dependent dethiobiotin synthetase BioD |
|
_____________178_______________________________211\n_____________|_________________________________|\n5'-GUC...UUCAA_____AAG___G___CACAUCAUUU________UUUUU...UCG-3'\n______________UCGGA____GA_CUG__________GAGGGGUU\n______________|||||____||_|||__________||||||||\n______________AGCCU____CU_GAC__________CUCCCCAA\n3'-UUU...AAAAA_____AGAA__A___UAU_______________CCCCU...AUA-5'\n_____________|_________________________________|\n_____________54________________________________27\n |
204 -- 210 |
28 -- 34 |
-21.1469 kcal/mol |
9.22099 kcal/mol |
0.985925 kcal/mol |
178 211@LB@ | |@LB@5'-GUC...UUCAA AAG G CACAUCAUUU UUUUU...UCG-3'@LB@ UCGGA GA CUG GAGGGGUU@LB@ ||||| || ||| ||||||||@LB@ AGCCU CU GAC CUCCCCAA@LB@3'-UUU...AAAAA AGAA A UAU CCCCU...AUA-5'@LB@ | |@LB@ 54 27@LB@@LB@@LB@Energy -10.94 kcal/mol@LB@Hybridization Energy -21.1469 kcal/mol@LB@Unfolding Energy - mRNA 9.22099 kcal/mol@LB@Unfolding Energy - sRNA 0.985925 kcal/mol@LB@@LB@Position - mRNA 179 -- 210@LB@Position - sRNA 28 -- 53@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 28 -- 34@LB@ |
26 |
0.0005174 |
0.06638 |
bsu28170 |
hemA |
-17.53 |
0.008676 |
171 -- 186 |
24 -- 36 |
glutamyl-tRNA reductase |
|
_____________170______________187\n_____________|________________|\n5'-AUG...AAUUA___UU___U_______GUGUA...UGC-3'\n______________AGA__GGG_GUUGGGG\n______________|||__|||_|||||||\n______________UCU__CCC_CAACCCC\n3'-UUU...GACUA________________UUGUC...AUA-5'\n_____________|________________|\n_____________37_______________23\n |
180 -- 186 |
24 -- 30 |
-19.8849 kcal/mol |
2.21391 kcal/mol |
0.138435 kcal/mol |
170 187@LB@ | |@LB@5'-AUG...AAUUA UU U GUGUA...UGC-3'@LB@ AGA GGG GUUGGGG@LB@ ||| ||| |||||||@LB@ UCU CCC CAACCCC@LB@3'-UUU...GACUA UUGUC...AUA-5'@LB@ | |@LB@ 37 23@LB@@LB@@LB@Energy -17.53 kcal/mol@LB@Hybridization Energy -19.8849 kcal/mol@LB@Unfolding Energy - mRNA 2.21391 kcal/mol@LB@Unfolding Energy - sRNA 0.138435 kcal/mol@LB@@LB@Position - mRNA 171 -- 186@LB@Position - sRNA 24 -- 36@LB@Position Seed - mRNA 180 -- 186@LB@Position Seed - sRNA 24 -- 30@LB@ |
27 |
0.0005687 |
0.07027 |
bsu32550 |
yurJ |
-13.20 |
0.065709 |
183 -- 191 |
31 -- 39 |
ABC transporter ATP-binding protein |
|
_____________182_______192\n_____________|_________|\n5'-AAC...CAAAA_________ACUUU...UGC-3'\n______________GAUAGGGGG\n______________|||||:|||\n______________CUAUCUCCC\n3'-UUU...CUAGA_________CAACC...AUA-5'\n_____________|_________|\n_____________40________30\n |
185 -- 191 |
31 -- 37 |
-15.8488 kcal/mol |
1.87568 kcal/mol |
0.774822 kcal/mol |
182 192@LB@ | |@LB@5'-AAC...CAAAA ACUUU...UGC-3'@LB@ GAUAGGGGG@LB@ |||||:|||@LB@ CUAUCUCCC@LB@3'-UUU...CUAGA CAACC...AUA-5'@LB@ | |@LB@ 40 30@LB@@LB@@LB@Energy -13.20 kcal/mol@LB@Hybridization Energy -15.8488 kcal/mol@LB@Unfolding Energy - mRNA 1.87568 kcal/mol@LB@Unfolding Energy - sRNA 0.774822 kcal/mol@LB@@LB@Position - mRNA 183 -- 191@LB@Position - sRNA 31 -- 39@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 31 -- 37@LB@ |
28 |
0.0009752 |
0.1113 |
bsu00830 |
ctsR |
-15.39 |
0.025224 |
189 -- 206 |
23 -- 36 |
transcriptional regulator CtsR |
|
_____________188________________207\n_____________|__________________|\n5'-UGG...GUAAA___G_______AGU____CAUAA...CAG-3'\n______________GGA_GGGGUUG___GGGA\n______________:||_|||||||___||||\n______________UCU_CCCCAAC___CCCU\n3'-UUU...GACUA__________________UGUCU...AUA-5'\n_____________|__________________|\n_____________37_________________22\n |
193 -- 199 |
27 -- 33 |
-19.308 kcal/mol |
3.78136 kcal/mol |
0.139628 kcal/mol |
188 207@LB@ | |@LB@5'-UGG...GUAAA G AGU CAUAA...CAG-3'@LB@ GGA GGGGUUG GGGA@LB@ :|| ||||||| ||||@LB@ UCU CCCCAAC CCCU@LB@3'-UUU...GACUA UGUCU...AUA-5'@LB@ | |@LB@ 37 22@LB@@LB@@LB@Energy -15.39 kcal/mol@LB@Hybridization Energy -19.308 kcal/mol@LB@Unfolding Energy - mRNA 3.78136 kcal/mol@LB@Unfolding Energy - sRNA 0.139628 kcal/mol@LB@@LB@Position - mRNA 189 -- 206@LB@Position - sRNA 23 -- 36@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 27 -- 33@LB@ |
29 |
0.0009972 |
0.1113 |
bsu38140 |
qoxD |
-9.49 |
0.251109 |
150 -- 190 |
24 -- 51 |
quinol oxidase subunit 4 |
|
_____________149_______________________________________191\n_____________|_________________________________________|\n5'-UUU...UGUAU_______C____UUAC___UGUCUAUCUCAU___A______GGUCU...CAG-3'\n______________GGAUUUU_AUCU____AGG____________GGG_UUGGGG\n______________||||:||_||||____||:____________|||_||||||\n______________CCUAGAA_UAGA____UCU____________CCC_AACCCC\n3'-UUU...AAAAG_______C____CUA___________________C______UUGUC...AUA-5'\n_____________|_________________________________________|\n_____________52________________________________________23\n |
150 -- 156 |
45 -- 51 |
-23.5355 kcal/mol |
13.0692 kcal/mol |
0.978921 kcal/mol |
149 191@LB@ | |@LB@5'-UUU...UGUAU C UUAC UGUCUAUCUCAU A GGUCU...CAG-3'@LB@ GGAUUUU AUCU AGG GGG UUGGGG@LB@ ||||:|| |||| ||: ||| ||||||@LB@ CCUAGAA UAGA UCU CCC AACCCC@LB@3'-UUU...AAAAG C CUA C UUGUC...AUA-5'@LB@ | |@LB@ 52 23@LB@@LB@@LB@Energy -9.49 kcal/mol@LB@Hybridization Energy -23.5355 kcal/mol@LB@Unfolding Energy - mRNA 13.0692 kcal/mol@LB@Unfolding Energy - sRNA 0.978921 kcal/mol@LB@@LB@Position - mRNA 150 -- 190@LB@Position - sRNA 24 -- 51@LB@Position Seed - mRNA 150 -- 156@LB@Position Seed - sRNA 45 -- 51@LB@ |
30 |
0.001001 |
0.1113 |
bsu08780 |
ygaJ |
-16.90 |
0.012052 |
218 -- 231 |
24 -- 39 |
peptidase YgaJ |
|
_____________217______________232\n_____________|________________|\n5'-UGU...AUUGC_________C______GUUUU...AGC-3'\n______________GAUGGGGGG___GGGG\n______________|||:|:|||___||||\n______________CUAUCUCCC___CCCC\n3'-UUU...CUAGA_________CAA____UUGUC...AUA-5'\n_____________|________________|\n_____________40_______________23\n |
220 -- 226 |
31 -- 37 |
-22.0746 kcal/mol |
4.38344 kcal/mol |
0.790436 kcal/mol |
217 232@LB@ | |@LB@5'-UGU...AUUGC C GUUUU...AGC-3'@LB@ GAUGGGGGG GGGG@LB@ |||:|:||| ||||@LB@ CUAUCUCCC CCCC@LB@3'-UUU...CUAGA CAA UUGUC...AUA-5'@LB@ | |@LB@ 40 23@LB@@LB@@LB@Energy -16.90 kcal/mol@LB@Hybridization Energy -22.0746 kcal/mol@LB@Unfolding Energy - mRNA 4.38344 kcal/mol@LB@Unfolding Energy - sRNA 0.790436 kcal/mol@LB@@LB@Position - mRNA 218 -- 231@LB@Position - sRNA 24 -- 39@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 31 -- 37@LB@ |
31 |
0.001131 |
0.119 |
bsu15020 |
coaD |
-13.71 |
0.053189 |
186 -- 192 |
30 -- 36 |
phosphopantetheine adenylyltransferase |
|
_____________185_____193\n_____________|_______|\n5'-UCC...UAAAA_______GUAGU...AUG-3'\n______________AGAGGGG\n______________|||||||\n______________UCUCCCC\n3'-UUU...GACUA_______AACCC...AUA-5'\n_____________|_______|\n_____________37______29\n |
186 -- 192 |
30 -- 36 |
-14.3069 kcal/mol |
0.46648 kcal/mol |
0.133643 kcal/mol |
185 193@LB@ | |@LB@5'-UCC...UAAAA GUAGU...AUG-3'@LB@ AGAGGGG@LB@ |||||||@LB@ UCUCCCC@LB@3'-UUU...GACUA AACCC...AUA-5'@LB@ | |@LB@ 37 29@LB@@LB@@LB@Energy -13.71 kcal/mol@LB@Hybridization Energy -14.3069 kcal/mol@LB@Unfolding Energy - mRNA 0.46648 kcal/mol@LB@Unfolding Energy - sRNA 0.133643 kcal/mol@LB@@LB@Position - mRNA 186 -- 192@LB@Position - sRNA 30 -- 36@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 30 -- 36@LB@ |
32 |
0.001154 |
0.119 |
bsu32820 |
fadE |
-9.01 |
0.290043 |
236 -- 252 |
32 -- 52 |
acyl-CoA dehydrogenase |
|
_____________235____________________253\n_____________|______________________|\n5'-AUU...GGCGG________UA____________AUGUC...AGC-3'\n______________CGGAUUUU__AUC_____GAGG\n______________|||||:||__|||_____||||\n______________GCCUAGAA__UAG_____CUCC\n3'-UUU...AAAAA________C____ACUAU____CCAAC...AUA-5'\n_____________|______________________|\n_____________53_____________________31\n |
237 -- 243 |
45 -- 51 |
-13.909 kcal/mol |
3.91995 kcal/mol |
0.976384 kcal/mol |
235 253@LB@ | |@LB@5'-AUU...GGCGG UA AUGUC...AGC-3'@LB@ CGGAUUUU AUC GAGG@LB@ |||||:|| ||| ||||@LB@ GCCUAGAA UAG CUCC@LB@3'-UUU...AAAAA C ACUAU CCAAC...AUA-5'@LB@ | |@LB@ 53 31@LB@@LB@@LB@Energy -9.01 kcal/mol@LB@Hybridization Energy -13.909 kcal/mol@LB@Unfolding Energy - mRNA 3.91995 kcal/mol@LB@Unfolding Energy - sRNA 0.976384 kcal/mol@LB@@LB@Position - mRNA 236 -- 252@LB@Position - sRNA 32 -- 52@LB@Position Seed - mRNA 237 -- 243@LB@Position Seed - sRNA 45 -- 51@LB@ |