169 |
0.01639 |
0.3152 |
bsu07850 |
yfkM |
-11.33 |
0.135062 |
186 -- 208 |
22 -- 34 |
general stress protein 18 |
|
_____________185_____________________209\n_____________|_______________________|\n5'-UGU...AAAGC___A___UAUGAAUCA_______AAAAA...CUG-3'\n______________GGG_GGU_________UGGGGAA\n______________:||_|||_________|||||||\n______________UCC_CCA_________ACCCCUU\n3'-UUU...CUAUC_______________________GUCUC...AUA-5'\n_____________|_______________________|\n_____________35______________________21\n |
202 -- 208 |
22 -- 28 |
-15.0114 kcal/mol |
2.66027 kcal/mol |
1.02154 kcal/mol |
185 209@LB@ | |@LB@5'-UGU...AAAGC A UAUGAAUCA AAAAA...CUG-3'@LB@ GGG GGU UGGGGAA@LB@ :|| ||| |||||||@LB@ UCC CCA ACCCCUU@LB@3'-UUU...CUAUC GUCUC...AUA-5'@LB@ | |@LB@ 35 21@LB@@LB@@LB@Energy -11.33 kcal/mol@LB@Hybridization Energy -15.0114 kcal/mol@LB@Unfolding Energy - mRNA 2.66027 kcal/mol@LB@Unfolding Energy - sRNA 1.02154 kcal/mol@LB@@LB@Position - mRNA 186 -- 208@LB@Position - sRNA 22 -- 34@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 22 -- 28@LB@ |
170 |
0.0164 |
0.3152 |
bsu13090 |
ykkC |
-8.27 |
0.358617 |
162 -- 212 |
23 -- 55 |
multidrug resistance protein |
|
_____________161__________________________________________________213\n_____________|____________________________________________________|\n5'-UCA...UUUGU_______GAA____A__A_______AA__AAUGACUCAAAAU_AAA______UUGGU...CCA-3'\n______________UUUCGGA___UCUU_AU__GAUAGA__GG_____________G___UGGGGA\n______________|||||||___||||_||__||||||__||_____________|___||||||\n______________AAAGCCU___AGAA_UA__CUAUCU__CC_____________C___ACCCCU\n3'-UUU...UCAAA______________C__GA______C_________________A________UGUCU...AUA-5'\n_____________|____________________________________________________|\n_____________56___________________________________________________22\n |
162 -- 168 |
49 -- 55 |
-21.902 kcal/mol |
11.1231 kcal/mol |
2.51158 kcal/mol |
161 213@LB@ | |@LB@5'-UCA...UUUGU GAA A A AA AAUGACUCAAAAU AAA UUGGU...CCA-3'@LB@ UUUCGGA UCUU AU GAUAGA GG G UGGGGA@LB@ ||||||| |||| || |||||| || | ||||||@LB@ AAAGCCU AGAA UA CUAUCU CC C ACCCCU@LB@3'-UUU...UCAAA C GA C A UGUCU...AUA-5'@LB@ | |@LB@ 56 22@LB@@LB@@LB@Energy -8.27 kcal/mol@LB@Hybridization Energy -21.902 kcal/mol@LB@Unfolding Energy - mRNA 11.1231 kcal/mol@LB@Unfolding Energy - sRNA 2.51158 kcal/mol@LB@@LB@Position - mRNA 162 -- 212@LB@Position - sRNA 23 -- 55@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 49 -- 55@LB@ |
171 |
0.01646 |
0.3152 |
bsu04650 |
endB |
-11.87 |
0.110785 |
167 -- 193 |
29 -- 53 |
antitoxin EndoAI |
|
_____________166_________________________194\n_____________|___________________________|\n5'-UUC...AAGAG___U___CGUAA____________U__AUGUU...GAA-3'\n______________UCG_AUC_____GUUUGGUGGAGG_GU\n______________|||_|||_____:|:||:|:||||_||\n______________AGC_UAG_____UAGACUAUCUCC_CA\n3'-UUU...AAAAA___C___AAC______________C__ACCCC...AUA-5'\n_____________|___________________________|\n_____________54__________________________28\n |
184 -- 190 |
32 -- 38 |
-19.891 kcal/mol |
7.03825 kcal/mol |
0.985603 kcal/mol |
166 194@LB@ | |@LB@5'-UUC...AAGAG U CGUAA U AUGUU...GAA-3'@LB@ UCG AUC GUUUGGUGGAGG GU@LB@ ||| ||| :|:||:|:|||| ||@LB@ AGC UAG UAGACUAUCUCC CA@LB@3'-UUU...AAAAA C AAC C ACCCC...AUA-5'@LB@ | |@LB@ 54 28@LB@@LB@@LB@Energy -11.87 kcal/mol@LB@Hybridization Energy -19.891 kcal/mol@LB@Unfolding Energy - mRNA 7.03825 kcal/mol@LB@Unfolding Energy - sRNA 0.985603 kcal/mol@LB@@LB@Position - mRNA 167 -- 193@LB@Position - sRNA 29 -- 53@LB@Position Seed - mRNA 184 -- 190@LB@Position Seed - sRNA 32 -- 38@LB@ |
172 |
0.01654 |
0.3152 |
bsu29680 |
acsA |
-11.36 |
0.133506 |
267 -- 288 |
32 -- 52 |
acetyl-CoA synthetase |
|
_____________266____________________289\n_____________|______________________|\n5'-UUU...CGUAC___C_________G__CC____CAGAG...AUU-3'\n______________CGG_AUUUUGAUU_GG__GAGG\n______________|||_||:|||||:_|:__||||\n______________GCC_UAGAACUAG_CU__CUCC\n3'-UUU...AAAAA_____________A__AU____CCAAC...AUA-5'\n_____________|______________________|\n_____________53_____________________31\n |
273 -- 279 |
41 -- 47 |
-18.8322 kcal/mol |
6.49419 kcal/mol |
0.976384 kcal/mol |
266 289@LB@ | |@LB@5'-UUU...CGUAC C G CC CAGAG...AUU-3'@LB@ CGG AUUUUGAUU GG GAGG@LB@ ||| ||:|||||: |: ||||@LB@ GCC UAGAACUAG CU CUCC@LB@3'-UUU...AAAAA A AU CCAAC...AUA-5'@LB@ | |@LB@ 53 31@LB@@LB@@LB@Energy -11.36 kcal/mol@LB@Hybridization Energy -18.8322 kcal/mol@LB@Unfolding Energy - mRNA 6.49419 kcal/mol@LB@Unfolding Energy - sRNA 0.976384 kcal/mol@LB@@LB@Position - mRNA 267 -- 288@LB@Position - sRNA 32 -- 52@LB@Position Seed - mRNA 273 -- 279@LB@Position Seed - sRNA 41 -- 47@LB@ |
173 |
0.01667 |
0.3152 |
bsu28970 |
ytxB |
-13.17 |
0.066474 |
182 -- 201 |
13 -- 34 |
tvp38/tmem64 family membrane protein YtxB |
|
_____________181____________________202\n_____________|______________________|\n5'-UGC...UUCAA_____AA_______U_______UGAAA...AAA-3'\n______________AGGGG____GGAAC_GAGGGUA\n______________|||||____|||||_|||:|||\n______________UCCCC____CCUUG_CUCUCAU\n3'-UUU...CUAUC_____AACC_____U_______CGAAG...AUA-5'\n_____________|______________________|\n_____________35_____________________12\n |
195 -- 201 |
13 -- 19 |
-25.067 kcal/mol |
2.85387 kcal/mol |
9.04315 kcal/mol |
181 202@LB@ | |@LB@5'-UGC...UUCAA AA U UGAAA...AAA-3'@LB@ AGGGG GGAAC GAGGGUA@LB@ ||||| ||||| |||:|||@LB@ UCCCC CCUUG CUCUCAU@LB@3'-UUU...CUAUC AACC U CGAAG...AUA-5'@LB@ | |@LB@ 35 12@LB@@LB@@LB@Energy -13.17 kcal/mol@LB@Hybridization Energy -25.067 kcal/mol@LB@Unfolding Energy - mRNA 2.85387 kcal/mol@LB@Unfolding Energy - sRNA 9.04315 kcal/mol@LB@@LB@Position - mRNA 182 -- 201@LB@Position - sRNA 13 -- 34@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 13 -- 19@LB@ |
174 |
0.01668 |
0.3152 |
bsu22210 |
yprB |
-13.05 |
0.069799 |
168 -- 191 |
31 -- 53 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; Product type pe: enzyme' |
|
_____________167______________________192\n_____________|________________________|\n5'-AUU...AGCUG_______AAAU___GUAA______AGGCC...AUG-3'\n______________UUGGAUC____GUC____GGAGGG\n______________|:|||||____:||____:|||||\n______________AGCCUAG____UAG____UCUCCC\n3'-UUU...AAAAA_______AAC____ACUA______CAACC...AUA-5'\n_____________|________________________|\n_____________54_______________________30\n |
168 -- 174 |
47 -- 53 |
-20.3327 kcal/mol |
6.30079 kcal/mol |
0.981784 kcal/mol |
167 192@LB@ | |@LB@5'-AUU...AGCUG AAAU GUAA AGGCC...AUG-3'@LB@ UUGGAUC GUC GGAGGG@LB@ |:||||| :|| :|||||@LB@ AGCCUAG UAG UCUCCC@LB@3'-UUU...AAAAA AAC ACUA CAACC...AUA-5'@LB@ | |@LB@ 54 30@LB@@LB@@LB@Energy -13.05 kcal/mol@LB@Hybridization Energy -20.3327 kcal/mol@LB@Unfolding Energy - mRNA 6.30079 kcal/mol@LB@Unfolding Energy - sRNA 0.981784 kcal/mol@LB@@LB@Position - mRNA 168 -- 191@LB@Position - sRNA 31 -- 53@LB@Position Seed - mRNA 168 -- 174@LB@Position Seed - sRNA 47 -- 53@LB@ |
175 |
0.01672 |
0.3152 |
bsu04630 |
ydcC |
-11.64 |
0.120416 |
196 -- 203 |
27 -- 34 |
sporulation protein YdcC |
|
_____________195______204\n_____________|________|\n5'-CCG...GAAAA________AAAAA...UGG-3'\n______________AGGGGUUG\n______________||||||||\n______________UCCCCAAC\n3'-UUU...CUAUC________CCCUU...AUA-5'\n_____________|________|\n_____________35_______26\n |
197 -- 203 |
27 -- 33 |
-14.5305 kcal/mol |
2.76844 kcal/mol |
0.118612 kcal/mol |
195 204@LB@ | |@LB@5'-CCG...GAAAA AAAAA...UGG-3'@LB@ AGGGGUUG@LB@ ||||||||@LB@ UCCCCAAC@LB@3'-UUU...CUAUC CCCUU...AUA-5'@LB@ | |@LB@ 35 26@LB@@LB@@LB@Energy -11.64 kcal/mol@LB@Hybridization Energy -14.5305 kcal/mol@LB@Unfolding Energy - mRNA 2.76844 kcal/mol@LB@Unfolding Energy - sRNA 0.118612 kcal/mol@LB@@LB@Position - mRNA 196 -- 203@LB@Position - sRNA 27 -- 34@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 27 -- 33@LB@ |
176 |
0.01673 |
0.3152 |
bsu08790 |
thiC |
-9.56 |
0.245346 |
273 -- 280 |
31 -- 38 |
phosphomethylpyrimidine synthase |
|
_____________272______281\n_____________|________|\n5'-GGC...UAUAC________UUCUU...AAG-3'\n______________GUGGAGGG\n______________:|:|||||\n______________UAUCUCCC\n3'-UUU...UAGAC________CAACC...AUA-5'\n_____________|________|\n_____________39_______30\n |
274 -- 280 |
31 -- 37 |
-12.4867 kcal/mol |
2.26991 kcal/mol |
0.65488 kcal/mol |
272 281@LB@ | |@LB@5'-GGC...UAUAC UUCUU...AAG-3'@LB@ GUGGAGGG@LB@ :|:|||||@LB@ UAUCUCCC@LB@3'-UUU...UAGAC CAACC...AUA-5'@LB@ | |@LB@ 39 30@LB@@LB@@LB@Energy -9.56 kcal/mol@LB@Hybridization Energy -12.4867 kcal/mol@LB@Unfolding Energy - mRNA 2.26991 kcal/mol@LB@Unfolding Energy - sRNA 0.65488 kcal/mol@LB@@LB@Position - mRNA 273 -- 280@LB@Position - sRNA 31 -- 38@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 31 -- 37@LB@ |
177 |
0.01681 |
0.3152 |
bsu00910 |
ispF |
-14.14 |
0.044127 |
219 -- 247 |
31 -- 51 |
2-D-methyl-D-erythritol 2 4-cyclodiphosphate synthase |
|
_____________218____________________________248\n_____________|______________________________|\n5'-UCG...GACAA__________G__CAUCAAUUA________CCGUC...UUG-3'\n______________GGAUU_UGAU_UG_________GUGGAGGG\n______________||||:_||||_||_________:|:|||||\n______________CCUAG_ACUA_AC_________UAUCUCCC\n3'-UUU...AAAAG_____A____G___________________CAACC...AUA-5'\n_____________|______________________________|\n_____________52_____________________________30\n |
241 -- 247 |
31 -- 37 |
-21.3343 kcal/mol |
6.22033 kcal/mol |
0.970589 kcal/mol |
218 248@LB@ | |@LB@5'-UCG...GACAA G CAUCAAUUA CCGUC...UUG-3'@LB@ GGAUU UGAU UG GUGGAGGG@LB@ ||||: |||| || :|:|||||@LB@ CCUAG ACUA AC UAUCUCCC@LB@3'-UUU...AAAAG A G CAACC...AUA-5'@LB@ | |@LB@ 52 30@LB@@LB@@LB@Energy -14.14 kcal/mol@LB@Hybridization Energy -21.3343 kcal/mol@LB@Unfolding Energy - mRNA 6.22033 kcal/mol@LB@Unfolding Energy - sRNA 0.970589 kcal/mol@LB@@LB@Position - mRNA 219 -- 247@LB@Position - sRNA 31 -- 51@LB@Position Seed - mRNA 241 -- 247@LB@Position Seed - sRNA 31 -- 37@LB@ |
178 |
0.01684 |
0.3152 |
bsu09460 |
ctrA |
-17.20 |
0.010320 |
182 -- 213 |
20 -- 50 |
amino acid permease |
|
_____________181_________________________________214\n_____________|___________________________________|\n5'-CAA...UAGAU____GG__G____________AA__AAA_______UUUUU...UAA-3'\n______________GAUC__GA_UUGA___AGGGG__UG___GGGAGCG\n______________||||__||_:|||___|||||__||___||||:|:\n______________CUAG__CU_GACU___UCCCC__AC___CCCUUGU\n3'-UUU...AAAGC____AA__A____AUC_____A_____________CUCUC...AUA-5'\n_____________|___________________________________|\n_____________51__________________________________19\n |
207 -- 213 |
20 -- 26 |
-25.5851 kcal/mol |
4.15406 kcal/mol |
4.22897 kcal/mol |
181 214@LB@ | |@LB@5'-CAA...UAGAU GG G AA AAA UUUUU...UAA-3'@LB@ GAUC GA UUGA AGGGG UG GGGAGCG@LB@ |||| || :||| ||||| || ||||:|:@LB@ CUAG CU GACU UCCCC AC CCCUUGU@LB@3'-UUU...AAAGC AA A AUC A CUCUC...AUA-5'@LB@ | |@LB@ 51 19@LB@@LB@@LB@Energy -17.20 kcal/mol@LB@Hybridization Energy -25.5851 kcal/mol@LB@Unfolding Energy - mRNA 4.15406 kcal/mol@LB@Unfolding Energy - sRNA 4.22897 kcal/mol@LB@@LB@Position - mRNA 182 -- 213@LB@Position - sRNA 20 -- 50@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 20 -- 26@LB@ |