| 42 |
0.001862 |
0.1479 |
bsu40320 |
argI |
-8.56 |
0.330283 |
1 -- 17 |
32 -- 48 |
arginase |
|
______________1_________________18\n______________|_________________|\n___________5'-_____C_______CC___AGCAG...UGA-3'\n______________UCUUG_AUUUGAU___GG\n______________|||||_||:||||___||\n______________AGAAC_UAGACUA___CC\n3'-UUU...AGCCU_____________UCU__CCAAC...AUA-5'\n_____________|__________________|\n_____________49_________________31\n |
7 -- 13 |
37 -- 43 |
-12.1859 kcal/mol |
2.6521 kcal/mol |
0.970016 kcal/mol |
1 18@LB@ | |@LB@ 5'- C CC AGCAG...UGA-3'@LB@ UCUUG AUUUGAU GG@LB@ ||||| ||:|||| ||@LB@ AGAAC UAGACUA CC@LB@3'-UUU...AGCCU UCU CCAAC...AUA-5'@LB@ | |@LB@ 49 31@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -12.1859 kcal/mol@LB@Unfolding Energy - mRNA 2.6521 kcal/mol@LB@Unfolding Energy - sRNA 0.970016 kcal/mol@LB@@LB@Position - mRNA 1 -- 17@LB@Position - sRNA 32 -- 48@LB@Position Seed - mRNA 7 -- 13@LB@Position Seed - sRNA 37 -- 43@LB@ |
| 74 |
0.005527 |
0.2441 |
bsu14880 |
ctaB |
-11.75 |
0.115909 |
1 -- 10 |
34 -- 43 |
protoheme IX farnesyltransferase 2 |
|
______________1_________11\n______________|_________|\n___________5'-__________AAUAA...UCG-3'\n______________GUCUGAUAGA\n______________:|||||||||\n______________UAGACUAUCU\n3'-UUU...AGAAC__________CCCCA...AUA-5'\n_____________|__________|\n_____________44_________33\n |
4 -- 10 |
34 -- 40 |
-13.2371 kcal/mol |
0.533082 kcal/mol |
0.957751 kcal/mol |
1 11@LB@ | |@LB@ 5'- AAUAA...UCG-3'@LB@ GUCUGAUAGA@LB@ :|||||||||@LB@ UAGACUAUCU@LB@3'-UUU...AGAAC CCCCA...AUA-5'@LB@ | |@LB@ 44 33@LB@@LB@@LB@Energy -11.75 kcal/mol@LB@Hybridization Energy -13.2371 kcal/mol@LB@Unfolding Energy - mRNA 0.533082 kcal/mol@LB@Unfolding Energy - sRNA 0.957751 kcal/mol@LB@@LB@Position - mRNA 1 -- 10@LB@Position - sRNA 34 -- 43@LB@Position Seed - mRNA 4 -- 10@LB@Position Seed - sRNA 34 -- 40@LB@ |
| 19 |
0.0003652 |
0.06216 |
bsu29920 |
ytmP |
-16.30 |
0.016289 |
3 -- 31 |
25 -- 51 |
phosphotransferase YtmP |
|
_____________2_____________________________32\n_____________|_____________________________|\n_________5'-AU_____GAACA______U__ACU_______ACAAU...GUA-3'\n______________GGGUU_____UUGAUA_GA___GGUUGGG\n______________||:|:_____:|||||_||___|||||||\n______________CCUAG_____GACUAU_CU___CCAACCC\n3'-UUU...AAAAG_____AACUA_________CC________CUUGU...AUA-5'\n_____________|_____________________________|\n_____________52____________________________24\n |
25 -- 31 |
25 -- 31 |
-23.4751 kcal/mol |
6.19942 kcal/mol |
0.976067 kcal/mol |
2 32@LB@ | |@LB@ 5'-AU GAACA U ACU ACAAU...GUA-3'@LB@ GGGUU UUGAUA GA GGUUGGG@LB@ ||:|: :||||| || |||||||@LB@ CCUAG GACUAU CU CCAACCC@LB@3'-UUU...AAAAG AACUA CC CUUGU...AUA-5'@LB@ | |@LB@ 52 24@LB@@LB@@LB@Energy -16.30 kcal/mol@LB@Hybridization Energy -23.4751 kcal/mol@LB@Unfolding Energy - mRNA 6.19942 kcal/mol@LB@Unfolding Energy - sRNA 0.976067 kcal/mol@LB@@LB@Position - mRNA 3 -- 31@LB@Position - sRNA 25 -- 51@LB@Position Seed - mRNA 25 -- 31@LB@Position Seed - sRNA 25 -- 31@LB@ |
| 34 |
0.001327 |
0.1302 |
bsu23550 |
mleA |
-19.34 |
0.003138 |
3 -- 24 |
31 -- 51 |
NAD-dependent malic enzyme 1 |
|
_____________2______________________25\n_____________|______________________|\n_________5'-AU__U_C____________AU___AUUUA...GGG-3'\n______________GG_U_CUUGGUCUGAUA__GGG\n______________||_|_||||:|||||||__|||\n______________CC_A_GAACUAGACUAU__CCC\n3'-UUU...AAAAG__U______________CU___CAACC...AUA-5'\n_____________|______________________|\n_____________52_____________________30\n |
13 -- 19 |
36 -- 42 |
-24.8934 kcal/mol |
4.58077 kcal/mol |
0.970589 kcal/mol |
2 25@LB@ | |@LB@ 5'-AU U C AU AUUUA...GGG-3'@LB@ GG U CUUGGUCUGAUA GGG@LB@ || | ||||:||||||| |||@LB@ CC A GAACUAGACUAU CCC@LB@3'-UUU...AAAAG U CU CAACC...AUA-5'@LB@ | |@LB@ 52 30@LB@@LB@@LB@Energy -19.34 kcal/mol@LB@Hybridization Energy -24.8934 kcal/mol@LB@Unfolding Energy - mRNA 4.58077 kcal/mol@LB@Unfolding Energy - sRNA 0.970589 kcal/mol@LB@@LB@Position - mRNA 3 -- 24@LB@Position - sRNA 31 -- 51@LB@Position Seed - mRNA 13 -- 19@LB@Position Seed - sRNA 36 -- 42@LB@ |
| 90 |
0.006982 |
0.2588 |
bsu40920 |
yyaF |
-12.87 |
0.074972 |
6 -- 31 |
25 -- 50 |
GTP-dependent nucleic acid-binding protein EngD |
|
_____________5___________________________32\n_____________|___________________________|\n______5'-CAAAU___ACAAAU_______AU__AA_____AAGUA...CGU-3'\n______________GAU______UCUGAUA__GG___UGGG\n______________|||______|||||||__||___||||\n______________CUA______AGACUAU__CC___ACCC\n3'-UUU...AAAGC___GAACU________CU__CCA____CUUGU...AUA-5'\n_____________|___________________________|\n_____________51__________________________24\n |
15 -- 21 |
36 -- 42 |
-17.5884 kcal/mol |
3.73957 kcal/mol |
0.976057 kcal/mol |
5 32@LB@ | |@LB@ 5'-CAAAU ACAAAU AU AA AAGUA...CGU-3'@LB@ GAU UCUGAUA GG UGGG@LB@ ||| ||||||| || ||||@LB@ CUA AGACUAU CC ACCC@LB@3'-UUU...AAAGC GAACU CU CCA CUUGU...AUA-5'@LB@ | |@LB@ 51 24@LB@@LB@@LB@Energy -12.87 kcal/mol@LB@Hybridization Energy -17.5884 kcal/mol@LB@Unfolding Energy - mRNA 3.73957 kcal/mol@LB@Unfolding Energy - sRNA 0.976057 kcal/mol@LB@@LB@Position - mRNA 6 -- 31@LB@Position - sRNA 25 -- 50@LB@Position Seed - mRNA 15 -- 21@LB@Position Seed - sRNA 36 -- 42@LB@ |
| 121 |
0.01072 |
0.2883 |
bsu28520 |
etfA |
-20.27 |
0.001775 |
7 -- 28 |
32 -- 50 |
electron transfer flavoprotein subunit alpha |
|
_____________6______________________29\n_____________|______________________|\n_____5'-CUUGAU_____________ACGA_____AUGCU...AUG-3'\n______________GAUCUUGAUCUGG____AGAGG\n______________||||||||||||:____|||||\n______________CUAGAACUAGACU____UCUCC\n3'-UUU...AAAGC_____________A________CCAAC...AUA-5'\n_____________|______________________|\n_____________51_____________________31\n |
13 -- 19 |
38 -- 44 |
-25.4493 kcal/mol |
4.21131 kcal/mol |
0.970199 kcal/mol |
6 29@LB@ | |@LB@ 5'-CUUGAU ACGA AUGCU...AUG-3'@LB@ GAUCUUGAUCUGG AGAGG@LB@ ||||||||||||: |||||@LB@ CUAGAACUAGACU UCUCC@LB@3'-UUU...AAAGC A CCAAC...AUA-5'@LB@ | |@LB@ 51 31@LB@@LB@@LB@Energy -20.27 kcal/mol@LB@Hybridization Energy -25.4493 kcal/mol@LB@Unfolding Energy - mRNA 4.21131 kcal/mol@LB@Unfolding Energy - sRNA 0.970199 kcal/mol@LB@@LB@Position - mRNA 7 -- 28@LB@Position - sRNA 32 -- 50@LB@Position Seed - mRNA 13 -- 19@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 135 |
0.01203 |
0.2883 |
bsu09920 |
yhaN |
-10.31 |
0.192319 |
8 -- 29 |
28 -- 47 |
'Evidence 3: Function proposed based on presence of conserved amino acid motif structural feature or limited homology; PubMedId: 16267290; Product type pe : enzyme' |
|
_____________7______________________30\n_____________|______________________|\n____5'-AACAAAC_______CUUUUUUU__C____UAUUU...ACG-3'\n______________CUUGAUC________GG_GGUU\n______________|||||||________||_||||\n______________GAACUAG________CC_CCAA\n3'-UUU...GCCUA_______ACUAUCU________CCCCU...AUA-5'\n_____________|______________________|\n_____________48_____________________27\n |
8 -- 14 |
41 -- 47 |
-14.5368 kcal/mol |
3.24797 kcal/mol |
0.974663 kcal/mol |
7 30@LB@ | |@LB@ 5'-AACAAAC CUUUUUUU C UAUUU...ACG-3'@LB@ CUUGAUC GG GGUU@LB@ ||||||| || ||||@LB@ GAACUAG CC CCAA@LB@3'-UUU...GCCUA ACUAUCU CCCCU...AUA-5'@LB@ | |@LB@ 48 27@LB@@LB@@LB@Energy -10.31 kcal/mol@LB@Hybridization Energy -14.5368 kcal/mol@LB@Unfolding Energy - mRNA 3.24797 kcal/mol@LB@Unfolding Energy - sRNA 0.974663 kcal/mol@LB@@LB@Position - mRNA 8 -- 29@LB@Position - sRNA 28 -- 47@LB@Position Seed - mRNA 8 -- 14@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 119 |
0.01041 |
0.2883 |
bsu11480 |
yjbB |
-12.30 |
0.094041 |
10 -- 19 |
22 -- 31 |
MFS transporter |
bsu07460 |
_____________9__________20\n_____________|__________|\n5'-UCA...UUAAA__A_______ACGAU...GGA-3'\n______________GG_UGGGGAA\n______________||_|||||||\n______________CC_ACCCCUU\n3'-UUU...UCUCC__A_______GUCUC...AUA-5'\n_____________|__________|\n_____________32_________21\n |
13 -- 19 |
22 -- 28 |
-13.9571 kcal/mol |
0.741777 kcal/mol |
0.918006 kcal/mol |
9 20@LB@ | |@LB@5'-UCA...UUAAA A ACGAU...GGA-3'@LB@ GG UGGGGAA@LB@ || |||||||@LB@ CC ACCCCUU@LB@3'-UUU...UCUCC A GUCUC...AUA-5'@LB@ | |@LB@ 32 21@LB@@LB@@LB@Energy -12.30 kcal/mol@LB@Hybridization Energy -13.9571 kcal/mol@LB@Unfolding Energy - mRNA 0.741777 kcal/mol@LB@Unfolding Energy - sRNA 0.918006 kcal/mol@LB@@LB@Position - mRNA 10 -- 19@LB@Position - sRNA 22 -- 31@LB@Position Seed - mRNA 13 -- 19@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 59 |
0.003314 |
0.1874 |
bsu01560 |
kbaA |
-8.60 |
0.327174 |
11 -- 30 |
33 -- 52 |
kinB-signaling pathway activation protein |
|
_____________10___________________31\n_____________|____________________|\n5'-AGU...AUAUC__CUG________UU_____CGCAA...AUA-3'\n______________CG___CUUGGUCU__UGGAG\n______________||___||||:|||__|:|||\n______________GC___GAACUAGA__AUCUC\n3'-UUU...AAAAA__CUA________CU_____CCCAA...AUA-5'\n_____________|____________________|\n_____________53___________________32\n |
17 -- 23 |
40 -- 46 |
-17.5678 kcal/mol |
7.9942 kcal/mol |
0.976367 kcal/mol |
10 31@LB@ | |@LB@5'-AGU...AUAUC CUG UU CGCAA...AUA-3'@LB@ CG CUUGGUCU UGGAG@LB@ || ||||:||| |:|||@LB@ GC GAACUAGA AUCUC@LB@3'-UUU...AAAAA CUA CU CCCAA...AUA-5'@LB@ | |@LB@ 53 32@LB@@LB@@LB@Energy -8.60 kcal/mol@LB@Hybridization Energy -17.5678 kcal/mol@LB@Unfolding Energy - mRNA 7.9942 kcal/mol@LB@Unfolding Energy - sRNA 0.976367 kcal/mol@LB@@LB@Position - mRNA 11 -- 30@LB@Position - sRNA 33 -- 52@LB@Position Seed - mRNA 17 -- 23@LB@Position Seed - sRNA 40 -- 46@LB@ |
| 113 |
0.00948 |
0.2799 |
bsu31960 |
dhbF |
-9.87 |
0.222399 |
16 -- 37 |
32 -- 53 |
dimodular nonribosomal peptide synthase |
|
_____________15______________________38\n_____________|_______________________|\n5'-AGA...CUCGA___U__________C________AUCAU...CAG-3'\n______________UCG_GGUCUUGAUU_GGUA_AGG\n______________|||_|:|||||||:_|:||_|||\n______________AGC_CUAGAACUAG_CUAU_UCC\n3'-UUU...AAAAA______________A____C___CCAAC...AUA-5'\n_____________|_______________________|\n_____________54______________________31\n |
22 -- 28 |
42 -- 48 |
-21.9493 kcal/mol |
11.0963 kcal/mol |
0.981755 kcal/mol |
15 38@LB@ | |@LB@5'-AGA...CUCGA U C AUCAU...CAG-3'@LB@ UCG GGUCUUGAUU GGUA AGG@LB@ ||| |:|||||||: |:|| |||@LB@ AGC CUAGAACUAG CUAU UCC@LB@3'-UUU...AAAAA A C CCAAC...AUA-5'@LB@ | |@LB@ 54 31@LB@@LB@@LB@Energy -9.87 kcal/mol@LB@Hybridization Energy -21.9493 kcal/mol@LB@Unfolding Energy - mRNA 11.0963 kcal/mol@LB@Unfolding Energy - sRNA 0.981755 kcal/mol@LB@@LB@Position - mRNA 16 -- 37@LB@Position - sRNA 32 -- 53@LB@Position Seed - mRNA 22 -- 28@LB@Position Seed - sRNA 42 -- 48@LB@ |
