86 |
0.005461 |
0.2147 |
b0002 |
thrA |
-11.41 |
0.159352 |
219 -- 235 |
1 -- 25 |
Bifunctional aspartokinase/homoserine dehydrogenase 1 |
|
_____________218_________________________236\n_____________|___________________________|\n5'-CCA...AGUUC__C__U_____________________AAAUG...UGG-3'\n______________GG_GG_ACAU__________CAGUGGC\n______________||_||_||||__________|||||||\n______________CC_CC_UGUA__________GUCACCG\n3'-UUU...UUUUA__________GUUUCUUUUC_______-5'\n_____________|__________________________|\n_____________26_________________________1\n |
229 -- 235 |
1 -- 7 |
-18.4664 kcal/mol |
4.54068 kcal/mol |
2.51748 kcal/mol |
218 236@LB@ | |@LB@5'-CCA...AGUUC C U AAAUG...UGG-3'@LB@ GG GG ACAU CAGUGGC@LB@ || || |||| |||||||@LB@ CC CC UGUA GUCACCG@LB@3'-UUU...UUUUA GUUUCUUUUC -5'@LB@ | |@LB@ 26 1@LB@@LB@@LB@Energy -11.41 kcal/mol@LB@Hybridization Energy -18.4664 kcal/mol@LB@Unfolding Energy - mRNA 4.54068 kcal/mol@LB@Unfolding Energy - sRNA 2.51748 kcal/mol@LB@@LB@Position - mRNA 219 -- 235@LB@Position - sRNA 1 -- 25@LB@Position Seed - mRNA 229 -- 235@LB@Position Seed - sRNA 1 -- 7@LB@ |
193 |
0.01407 |
0.2529 |
b3582 |
sgbU |
-12.18 |
0.114391 |
219 -- 241 |
1 -- 24 |
putative L-xylulose 5-phosphate 3-epimerase |
|
_____________218______________________242\n_____________|________________________|\n5'-UCU...AGUUA_________UGA_______C____GAAAG...UUG-3'\n______________GGGAU_UUA___AAAAGCG_UGGC\n______________||||:_|:|___||||||:_||||\n______________CCCUG_AGU___UUUUCGU_ACCG\n3'-UUU...UUUAC_____U___UUC_______C____-5'\n_____________|_______________________|\n_____________25______________________1\n |
230 -- 236 |
6 -- 12 |
-20.9157 kcal/mol |
6.29567 kcal/mol |
2.44282 kcal/mol |
218 242@LB@ | |@LB@5'-UCU...AGUUA UGA C GAAAG...UUG-3'@LB@ GGGAU UUA AAAAGCG UGGC@LB@ ||||: |:| ||||||: ||||@LB@ CCCUG AGU UUUUCGU ACCG@LB@3'-UUU...UUUAC U UUC C -5'@LB@ | |@LB@ 25 1@LB@@LB@@LB@Energy -12.18 kcal/mol@LB@Hybridization Energy -20.9157 kcal/mol@LB@Unfolding Energy - mRNA 6.29567 kcal/mol@LB@Unfolding Energy - sRNA 2.44282 kcal/mol@LB@@LB@Position - mRNA 219 -- 241@LB@Position - sRNA 1 -- 24@LB@Position Seed - mRNA 230 -- 236@LB@Position Seed - sRNA 6 -- 12@LB@ |
111 |
0.007434 |
0.2348 |
b0103 |
coaE |
-19.66 |
0.001155 |
224 -- 242 |
1 -- 25 |
dephospho-CoA kinase |
|
_____________223________________________243\n_____________|__________________________|\n5'-UAU...UUAAC___A______________________AAGAG...AUA-3'\n______________GGG_GGCAUU_______GGCAGUGGC\n______________|||_|:|||:_______:||||||||\n______________CCC_CUGUAG_______UCGUCACCG\n3'-UUU...UUUUA__________UUUCUUU_________-5'\n_____________|_________________________|\n_____________26________________________1\n |
236 -- 242 |
1 -- 7 |
-28.3462 kcal/mol |
6.16994 kcal/mol |
2.51748 kcal/mol |
223 243@LB@ | |@LB@5'-UAU...UUAAC A AAGAG...AUA-3'@LB@ GGG GGCAUU GGCAGUGGC@LB@ ||| |:|||: :||||||||@LB@ CCC CUGUAG UCGUCACCG@LB@3'-UUU...UUUUA UUUCUUU -5'@LB@ | |@LB@ 26 1@LB@@LB@@LB@Energy -19.66 kcal/mol@LB@Hybridization Energy -28.3462 kcal/mol@LB@Unfolding Energy - mRNA 6.16994 kcal/mol@LB@Unfolding Energy - sRNA 2.51748 kcal/mol@LB@@LB@Position - mRNA 224 -- 242@LB@Position - sRNA 1 -- 25@LB@Position Seed - mRNA 236 -- 242@LB@Position Seed - sRNA 1 -- 7@LB@ |
35 |
0.00168 |
0.1648 |
b2231 |
gyrA |
-15.33 |
0.023033 |
230 -- 249 |
7 -- 25 |
DNA gyrase (type II topoisomerase) subunit A |
|
_____________229__________________250\n_____________|____________________|\n5'-AGC...ACACC__UCA_______________UGAAG...CGC-3'\n______________GG___ACAUUGAGGAAGAGC\n______________||___||||::|:|||:|||\n______________CC___UGUAGUUUCUUUUCG\n3'-UUU...UUUUA__CC________________UCACCG-5'\n_____________|____________________|\n_____________26___________________6\n |
243 -- 249 |
7 -- 13 |
-19.3394 kcal/mol |
3.30418 kcal/mol |
0.70626 kcal/mol |
229 250@LB@ | |@LB@5'-AGC...ACACC UCA UGAAG...CGC-3'@LB@ GG ACAUUGAGGAAGAGC@LB@ || ||||::|:|||:|||@LB@ CC UGUAGUUUCUUUUCG@LB@3'-UUU...UUUUA CC UCACCG-5'@LB@ | |@LB@ 26 6@LB@@LB@@LB@Energy -15.33 kcal/mol@LB@Hybridization Energy -19.3394 kcal/mol@LB@Unfolding Energy - mRNA 3.30418 kcal/mol@LB@Unfolding Energy - sRNA 0.70626 kcal/mol@LB@@LB@Position - mRNA 230 -- 249@LB@Position - sRNA 7 -- 25@LB@Position Seed - mRNA 243 -- 249@LB@Position Seed - sRNA 7 -- 13@LB@ |
180 |
0.01303 |
0.2504 |
b3487 |
yhiI |
-13.61 |
0.058128 |
230 -- 256 |
1 -- 27 |
putative membrane fusion protein (MFP) of efflux pump |
|
_____________229__________________________257\n_____________|____________________________|\n5'-UUU...GCGUG_____U________UUACU_________GGCUA...CGG-3'\n______________GUGGG__UGUCGGG_____GGCGGUGGC\n______________:||||__::||:::_____:||:|||||\n______________UACCC__GUAGUUU_____UCGUCACCG\n3'-UUU...UGUUU_____CU_______CUUU__________-5'\n_____________|___________________________|\n_____________28__________________________1\n |
250 -- 256 |
1 -- 7 |
-27.1902 kcal/mol |
11.0661 kcal/mol |
2.51867 kcal/mol |
229 257@LB@ | |@LB@5'-UUU...GCGUG U UUACU GGCUA...CGG-3'@LB@ GUGGG UGUCGGG GGCGGUGGC@LB@ :|||| ::||::: :||:|||||@LB@ UACCC GUAGUUU UCGUCACCG@LB@3'-UUU...UGUUU CU CUUU -5'@LB@ | |@LB@ 28 1@LB@@LB@@LB@Energy -13.61 kcal/mol@LB@Hybridization Energy -27.1902 kcal/mol@LB@Unfolding Energy - mRNA 11.0661 kcal/mol@LB@Unfolding Energy - sRNA 2.51867 kcal/mol@LB@@LB@Position - mRNA 230 -- 256@LB@Position - sRNA 1 -- 27@LB@Position Seed - mRNA 250 -- 256@LB@Position Seed - sRNA 1 -- 7@LB@ |
175 |
0.01275 |
0.2504 |
b3057 |
bacA |
-10.43 |
0.234919 |
238 -- 261 |
5 -- 26 |
undecaprenyl pyrophosphate phosphatase |
|
_____________237______________________262\n_____________|________________________|\n5'-UUC...AAUAU____U_UG_________UU_A___AAUUU...UUG-3'\n______________UGGG_G__GUCGAAGGA__G_CAG\n______________||||_|__:||:|||:|__|_|||\n______________ACCC_C__UAGUUUCUU__C_GUC\n3'-UUU...GUUUU______UG_________UU_____ACCG-5'\n_____________|________________________|\n_____________27_______________________4\n |
248 -- 254 |
11 -- 17 |
-20.3624 kcal/mol |
7.43347 kcal/mol |
2.50108 kcal/mol |
237 262@LB@ | |@LB@5'-UUC...AAUAU U UG UU A AAUUU...UUG-3'@LB@ UGGG G GUCGAAGGA G CAG@LB@ |||| | :||:|||:| | |||@LB@ ACCC C UAGUUUCUU C GUC@LB@3'-UUU...GUUUU UG UU ACCG-5'@LB@ | |@LB@ 27 4@LB@@LB@@LB@Energy -10.43 kcal/mol@LB@Hybridization Energy -20.3624 kcal/mol@LB@Unfolding Energy - mRNA 7.43347 kcal/mol@LB@Unfolding Energy - sRNA 2.50108 kcal/mol@LB@@LB@Position - mRNA 238 -- 261@LB@Position - sRNA 5 -- 26@LB@Position Seed - mRNA 248 -- 254@LB@Position Seed - sRNA 11 -- 17@LB@ |
36 |
0.001784 |
0.1648 |
b0785 |
moaE |
-14.28 |
0.040953 |
241 -- 264 |
1 -- 21 |
molybdopterin synthase large subunit |
|
_____________240______________________265\n_____________|________________________|\n5'-AGA...GUUCA____A___________CCC_____UGGCG...CCU-3'\n______________GCGU_GGAGAAGAGUA___GUGGC\n______________:|:|_::||||:||:|___|||||\n______________UGUA_UUUCUUUUCGU___CACCG\n3'-UUU...ACCCC____G___________________-5'\n_____________|_______________________|\n_____________22______________________1\n |
250 -- 256 |
6 -- 12 |
-21.7367 kcal/mol |
5.94077 kcal/mol |
1.51103 kcal/mol |
240 265@LB@ | |@LB@5'-AGA...GUUCA A CCC UGGCG...CCU-3'@LB@ GCGU GGAGAAGAGUA GUGGC@LB@ :|:| ::||||:||:| |||||@LB@ UGUA UUUCUUUUCGU CACCG@LB@3'-UUU...ACCCC G -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -14.28 kcal/mol@LB@Hybridization Energy -21.7367 kcal/mol@LB@Unfolding Energy - mRNA 5.94077 kcal/mol@LB@Unfolding Energy - sRNA 1.51103 kcal/mol@LB@@LB@Position - mRNA 241 -- 264@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 250 -- 256@LB@Position Seed - sRNA 6 -- 12@LB@ |
114 |
0.007692 |
0.2368 |
b0584 |
fepA |
-13.71 |
0.055244 |
241 -- 265 |
1 -- 26 |
ferrienterobactin outer membrane transporter |
|
_____________240________________________266\n_____________|__________________________|\n5'-GAA...CAAUC___________U____U____CA___ACAAG...ACG-3'\n______________UGGGGAU_UUA_GGGG_AGCG__GGC\n______________||||||:_|:|_:|::_|||:__|||\n______________ACCCCUG_AGU_UCUU_UCGU__CCG\n3'-UUU...GUUUU_______U___U____U____CA___-5'\n_____________|_________________________|\n_____________27________________________1\n |
241 -- 247 |
20 -- 26 |
-24.8633 kcal/mol |
8.63835 kcal/mol |
2.51842 kcal/mol |
240 266@LB@ | |@LB@5'-GAA...CAAUC U U CA ACAAG...ACG-3'@LB@ UGGGGAU UUA GGGG AGCG GGC@LB@ ||||||: |:| :|:: |||: |||@LB@ ACCCCUG AGU UCUU UCGU CCG@LB@3'-UUU...GUUUU U U U CA -5'@LB@ | |@LB@ 27 1@LB@@LB@@LB@Energy -13.71 kcal/mol@LB@Hybridization Energy -24.8633 kcal/mol@LB@Unfolding Energy - mRNA 8.63835 kcal/mol@LB@Unfolding Energy - sRNA 2.51842 kcal/mol@LB@@LB@Position - mRNA 241 -- 265@LB@Position - sRNA 1 -- 26@LB@Position Seed - mRNA 241 -- 247@LB@Position Seed - sRNA 20 -- 26@LB@ |
91 |
0.005641 |
0.2147 |
b3956 |
ppc |
-14.82 |
0.030673 |
242 -- 282 |
2 -- 37 |
phosphoenolpyruvate carboxylase |
|
_____________241_________________________________________283\n_____________|___________________________________________|\n5'-CUU...AGUAU____G________CU____GAAAC_________U_____U___GAGAA...AAC-3'\n______________GCUC_GCAAAGUG__GGGA_____CAUCAAGGA___GCG_UGG\n______________||||_:||||:||__||||_____||||||:||___||:_|||\n______________CGAG_UGUUUUAC__CCCU_____GUAGUUUCU___CGU_ACC\n3'-UUU...CUACC____G____________________________UUU___C___G-5'\n_____________|___________________________________________|\n_____________38__________________________________________1\n |
268 -- 274 |
12 -- 18 |
-37.6415 kcal/mol |
13.2441 kcal/mol |
9.57751 kcal/mol |
241 283@LB@ | |@LB@5'-CUU...AGUAU G CU GAAAC U U GAGAA...AAC-3'@LB@ GCUC GCAAAGUG GGGA CAUCAAGGA GCG UGG@LB@ |||| :||||:|| |||| ||||||:|| ||: |||@LB@ CGAG UGUUUUAC CCCU GUAGUUUCU CGU ACC@LB@3'-UUU...CUACC G UUU C G-5'@LB@ | |@LB@ 38 1@LB@@LB@@LB@Energy -14.82 kcal/mol@LB@Hybridization Energy -37.6415 kcal/mol@LB@Unfolding Energy - mRNA 13.2441 kcal/mol@LB@Unfolding Energy - sRNA 9.57751 kcal/mol@LB@@LB@Position - mRNA 242 -- 282@LB@Position - sRNA 2 -- 37@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 12 -- 18@LB@ |
14 |
0.0006392 |
0.1243 |
b3745 |
viaA |
-13.90 |
0.050132 |
246 -- 264 |
10 -- 25 |
stimulator of RavA ATPase activity; von Willebrand factor domain protein |
|
_____________245_________________265\n_____________|___________________|\n5'-ACG...GCGAA_A_____UG__________UGAUC...CGG-3'\n______________G_GGGAU__AUCGAAGAGA\n______________|_||||:__|||:||||:|\n______________C_CCCUG__UAGUUUCUUU\n3'-UUU...UUUUA___________________UCGUC...CCG-5'\n_____________|___________________|\n_____________26__________________9\n |
258 -- 264 |
10 -- 16 |
-16.9183 kcal/mol |
2.35086 kcal/mol |
0.670388 kcal/mol |
245 265@LB@ | |@LB@5'-ACG...GCGAA A UG UGAUC...CGG-3'@LB@ G GGGAU AUCGAAGAGA@LB@ | ||||: |||:||||:|@LB@ C CCCUG UAGUUUCUUU@LB@3'-UUU...UUUUA UCGUC...CCG-5'@LB@ | |@LB@ 26 9@LB@@LB@@LB@Energy -13.90 kcal/mol@LB@Hybridization Energy -16.9183 kcal/mol@LB@Unfolding Energy - mRNA 2.35086 kcal/mol@LB@Unfolding Energy - sRNA 0.670388 kcal/mol@LB@@LB@Position - mRNA 246 -- 264@LB@Position - sRNA 10 -- 25@LB@Position Seed - mRNA 258 -- 264@LB@Position Seed - sRNA 10 -- 16@LB@ |