91 |
0.01869 |
0.6177 |
b3432 |
glgB |
-9.43 |
0.053684 |
93 -- 103 |
45 -- 56 |
1 4-alpha-glucan branching enzyme |
|
_____________92___________104\n_____________|____________|\n5'-CAU...GACGA____________UGCAC...GAC-3'\n______________CG_CAGAGAGGA\n______________||_||:||||||\n______________GC_GUUUCUCCU\n3'-UUU...ACCGG__A_________UAAAG...ACA-5'\n_____________|____________|\n_____________57___________44\n |
97 -- 103 |
45 -- 51 |
-14.5586 kcal/mol |
4.18817 kcal/mol |
0.938337 kcal/mol |
92 104@LB@ | |@LB@5'-CAU...GACGA UGCAC...GAC-3'@LB@ CG CAGAGAGGA@LB@ || ||:||||||@LB@ GC GUUUCUCCU@LB@3'-UUU...ACCGG A UAAAG...ACA-5'@LB@ | |@LB@ 57 44@LB@@LB@@LB@Energy -9.43 kcal/mol@LB@Hybridization Energy -14.5586 kcal/mol@LB@Unfolding Energy - mRNA 4.18817 kcal/mol@LB@Unfolding Energy - sRNA 0.938337 kcal/mol@LB@@LB@Position - mRNA 93 -- 103@LB@Position - sRNA 45 -- 56@LB@Position Seed - mRNA 97 -- 103@LB@Position Seed - sRNA 45 -- 51@LB@ |
172 |
0.03476 |
0.6177 |
b3441 |
yhhY |
-9.34 |
0.055938 |
185 -- 193 |
45 -- 53 |
aminoacyl nucleotide detoxifying acetyltransferase |
|
_____________184_______194\n_____________|_________|\n5'-CCC...UACCC_________CAAAG...UGC-3'\n______________CAAAGAGGA\n______________|||||||||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
187 -- 193 |
45 -- 51 |
-12.8083 kcal/mol |
2.54681 kcal/mol |
0.917553 kcal/mol |
184 194@LB@ | |@LB@5'-CCC...UACCC CAAAG...UGC-3'@LB@ CAAAGAGGA@LB@ |||||||||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -9.34 kcal/mol@LB@Hybridization Energy -12.8083 kcal/mol@LB@Unfolding Energy - mRNA 2.54681 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 185 -- 193@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 45 -- 51@LB@ |
140 |
0.02703 |
0.6177 |
b3447 |
ggt |
-5.41 |
0.319095 |
66 -- 81 |
38 -- 54 |
gamma-glutamyltranspeptidase |
|
_____________65________________82\n_____________|_________________|\n5'-GUU...AAGAA________UC_______CGCGU...CGU-3'\n______________UCAGA_AG__GUUUCAU\n______________|||:|_||__:||||||\n______________AGUUU_UC__UAAAGUA\n3'-UUU...CGGGC_____C__CU_______AAAAA...ACA-5'\n_____________|_________________|\n_____________55________________37\n |
75 -- 81 |
38 -- 44 |
-8.61894 kcal/mol |
2.03989 kcal/mol |
1.17036 kcal/mol |
65 82@LB@ | |@LB@5'-GUU...AAGAA UC CGCGU...CGU-3'@LB@ UCAGA AG GUUUCAU@LB@ |||:| || :||||||@LB@ AGUUU UC UAAAGUA@LB@3'-UUU...CGGGC C CU AAAAA...ACA-5'@LB@ | |@LB@ 55 37@LB@@LB@@LB@Energy -5.41 kcal/mol@LB@Hybridization Energy -8.61894 kcal/mol@LB@Unfolding Energy - mRNA 2.03989 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 66 -- 81@LB@Position - sRNA 38 -- 54@LB@Position Seed - mRNA 75 -- 81@LB@Position Seed - sRNA 38 -- 44@LB@ |
59 |
0.01284 |
0.6177 |
b3453 |
ugpB |
-7.80 |
0.113752 |
247 -- 260 |
43 -- 56 |
sn-glycerol-3-phosphate ABC transporter periplasmic binding protein |
|
_____________246____________261\n_____________|______________|\n5'-UUC...ACUGG______U_______GCACA...UGG-3'\n______________CGUUAA_GGGGAAU\n______________|||:||_|:|||||\n______________GCAGUU_CUCCUUA\n3'-UUU...ACCGG______U_______AAGUA...ACA-5'\n_____________|______________|\n_____________57_____________42\n |
254 -- 260 |
43 -- 49 |
-14.4117 kcal/mol |
5.65325 kcal/mol |
0.953958 kcal/mol |
246 261@LB@ | |@LB@5'-UUC...ACUGG U GCACA...UGG-3'@LB@ CGUUAA GGGGAAU@LB@ |||:|| |:|||||@LB@ GCAGUU CUCCUUA@LB@3'-UUU...ACCGG U AAGUA...ACA-5'@LB@ | |@LB@ 57 42@LB@@LB@@LB@Energy -7.80 kcal/mol@LB@Hybridization Energy -14.4117 kcal/mol@LB@Unfolding Energy - mRNA 5.65325 kcal/mol@LB@Unfolding Energy - sRNA 0.953958 kcal/mol@LB@@LB@Position - mRNA 247 -- 260@LB@Position - sRNA 43 -- 56@LB@Position Seed - mRNA 254 -- 260@LB@Position Seed - sRNA 43 -- 49@LB@ |
93 |
0.01877 |
0.6177 |
b3492 |
yhiN |
-6.30 |
0.220558 |
150 -- 160 |
43 -- 53 |
putative oxidoreductase |
|
_____________149_________161\n_____________|___________|\n5'-CGG...GCGAC__CU_______CUUUA...AUA-3'\n______________CA__GAGGAAU\n______________||__|||||||\n______________GU__CUCCUUA\n3'-UUU...GGGCA__UU_______AAGUA...ACA-5'\n_____________|___________|\n_____________54__________42\n |
154 -- 160 |
43 -- 49 |
-10.7951 kcal/mol |
3.55798 kcal/mol |
0.933055 kcal/mol |
149 161@LB@ | |@LB@5'-CGG...GCGAC CU CUUUA...AUA-3'@LB@ CA GAGGAAU@LB@ || |||||||@LB@ GU CUCCUUA@LB@3'-UUU...GGGCA UU AAGUA...ACA-5'@LB@ | |@LB@ 54 42@LB@@LB@@LB@Energy -6.30 kcal/mol@LB@Hybridization Energy -10.7951 kcal/mol@LB@Unfolding Energy - mRNA 3.55798 kcal/mol@LB@Unfolding Energy - sRNA 0.933055 kcal/mol@LB@@LB@Position - mRNA 150 -- 160@LB@Position - sRNA 43 -- 53@LB@Position Seed - mRNA 154 -- 160@LB@Position Seed - sRNA 43 -- 49@LB@ |
87 |
0.01794 |
0.6177 |
b3499 |
rlmJ |
-10.99 |
0.025859 |
12 -- 21 |
46 -- 55 |
23S rRNA m(6)A2030 methyltransferase SAM-dependent |
|
_____________11_________22\n_____________|__________|\n5'-GCG...UCCUG__________UUAAG...AUA-3'\n______________GUUAAAGAGG\n______________||:|||||||\n______________CAGUUUCUCC\n3'-UUU...CCGGG__________UUAAA...ACA-5'\n_____________|__________|\n_____________56_________45\n |
15 -- 21 |
46 -- 52 |
-14.3615 kcal/mol |
2.45195 kcal/mol |
0.924411 kcal/mol |
11 22@LB@ | |@LB@5'-GCG...UCCUG UUAAG...AUA-3'@LB@ GUUAAAGAGG@LB@ ||:|||||||@LB@ CAGUUUCUCC@LB@3'-UUU...CCGGG UUAAA...ACA-5'@LB@ | |@LB@ 56 45@LB@@LB@@LB@Energy -10.99 kcal/mol@LB@Hybridization Energy -14.3615 kcal/mol@LB@Unfolding Energy - mRNA 2.45195 kcal/mol@LB@Unfolding Energy - sRNA 0.924411 kcal/mol@LB@@LB@Position - mRNA 12 -- 21@LB@Position - sRNA 46 -- 55@LB@Position Seed - mRNA 15 -- 21@LB@Position Seed - sRNA 46 -- 52@LB@ |
135 |
0.02628 |
0.6177 |
b3547 |
yhjX |
-9.70 |
0.047334 |
158 -- 184 |
28 -- 55 |
pyruvate-inducible inner membrane protein putative transporter |
|
_____________157___________________________185\n_____________|_____________________________|\n5'-UAA...UGGUU_____C____AUU____C___________CUGCA...UUA-3'\n______________GUCGG_AGAG___UUUC___UUUUUAUUA\n______________|||::_||||___||||___|||||||||\n______________CAGUU_UCUC___AAAG___AAAAAUAAU\n3'-UUU...CCGGG__________CUU____UAA_________AAUAC...ACA-5'\n_____________|_____________________________|\n_____________56____________________________27\n |
178 -- 184 |
28 -- 34 |
-15.2509 kcal/mol |
4.36169 kcal/mol |
1.18814 kcal/mol |
157 185@LB@ | |@LB@5'-UAA...UGGUU C AUU C CUGCA...UUA-3'@LB@ GUCGG AGAG UUUC UUUUUAUUA@LB@ |||:: |||| |||| |||||||||@LB@ CAGUU UCUC AAAG AAAAAUAAU@LB@3'-UUU...CCGGG CUU UAA AAUAC...ACA-5'@LB@ | |@LB@ 56 27@LB@@LB@@LB@Energy -9.70 kcal/mol@LB@Hybridization Energy -15.2509 kcal/mol@LB@Unfolding Energy - mRNA 4.36169 kcal/mol@LB@Unfolding Energy - sRNA 1.18814 kcal/mol@LB@@LB@Position - mRNA 158 -- 184@LB@Position - sRNA 28 -- 55@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 28 -- 34@LB@ |
17 |
0.003407 |
0.593 |
b3607 |
cysE |
-9.56 |
0.050591 |
4 -- 44 |
27 -- 56 |
serine acetyltransferase |
|
_____________3__________________________________________45\n_____________|__________________________________________|\n________5'-CGG_______AUGCCAAUAACC______A_____CAAG_______AUUGC...CGA-3'\n______________CGUUGAA____________GAGGAA_UUUAU_____UAUUAU\n______________|||::||____________||||||_||:||_____||||||\n______________GCAGUUU____________CUCCUU_AAGUA_____AUAAUA\n3'-UUU...ACCGG_________________________A_____AAAAA______AUACG...ACA-5'\n_____________|__________________________________________|\n_____________57_________________________________________26\n |
4 -- 10 |
50 -- 56 |
-14.2001 kcal/mol |
3.44433 kcal/mol |
1.19682 kcal/mol |
3 45@LB@ | |@LB@ 5'-CGG AUGCCAAUAACC A CAAG AUUGC...CGA-3'@LB@ CGUUGAA GAGGAA UUUAU UAUUAU@LB@ |||::|| |||||| ||:|| ||||||@LB@ GCAGUUU CUCCUU AAGUA AUAAUA@LB@3'-UUU...ACCGG A AAAAA AUACG...ACA-5'@LB@ | |@LB@ 57 26@LB@@LB@@LB@Energy -9.56 kcal/mol@LB@Hybridization Energy -14.2001 kcal/mol@LB@Unfolding Energy - mRNA 3.44433 kcal/mol@LB@Unfolding Energy - sRNA 1.19682 kcal/mol@LB@@LB@Position - mRNA 4 -- 44@LB@Position - sRNA 27 -- 56@LB@Position Seed - mRNA 4 -- 10@LB@Position Seed - sRNA 50 -- 56@LB@ |
183 |
0.03803 |
0.6177 |
b3616 |
tdh |
-7.63 |
0.122830 |
33 -- 50 |
37 -- 52 |
L-threonine 3-dehydrogenase NAD(P)-binding |
|
_____________32_________________51\n_____________|__________________|\n5'-UAG...UGCAA________C____A____ACCGG...GUA-3'\n______________AAAGAGGG_AUUU_CGUU\n______________|||||||:_||||_|:||\n______________UUUCUCCU_UAAA_GUAA\n3'-UUU...GGCAG__________________AAAAA...ACA-5'\n_____________|__________________|\n_____________53_________________36\n |
34 -- 40 |
45 -- 51 |
-11.8553 kcal/mol |
3.14412 kcal/mol |
1.07641 kcal/mol |
32 51@LB@ | |@LB@5'-UAG...UGCAA C A ACCGG...GUA-3'@LB@ AAAGAGGG AUUU CGUU@LB@ |||||||: |||| |:||@LB@ UUUCUCCU UAAA GUAA@LB@3'-UUU...GGCAG AAAAA...ACA-5'@LB@ | |@LB@ 53 36@LB@@LB@@LB@Energy -7.63 kcal/mol@LB@Hybridization Energy -11.8553 kcal/mol@LB@Unfolding Energy - mRNA 3.14412 kcal/mol@LB@Unfolding Energy - sRNA 1.07641 kcal/mol@LB@@LB@Position - mRNA 33 -- 50@LB@Position - sRNA 37 -- 52@LB@Position Seed - mRNA 34 -- 40@LB@Position Seed - sRNA 45 -- 51@LB@ |
115 |
0.02287 |
0.6177 |
b3621 |
waaC |
-10.02 |
0.040839 |
179 -- 191 |
44 -- 55 |
ADP-heptose:LPS heptosyl transferase I |
|
_____________178___________192\n_____________|_____________|\n5'-UUG...CUAUU____C________GCCUG...UUG-3'\n______________GUUA_AAGAGGAA\n______________||:|_||||||||\n______________CAGU_UUCUCCUU\n3'-UUU...CCGGG_____________AAAGU...ACA-5'\n_____________|_____________|\n_____________56____________43\n |
185 -- 191 |
44 -- 50 |
-12.6771 kcal/mol |
1.72007 kcal/mol |
0.941432 kcal/mol |
178 192@LB@ | |@LB@5'-UUG...CUAUU C GCCUG...UUG-3'@LB@ GUUA AAGAGGAA@LB@ ||:| ||||||||@LB@ CAGU UUCUCCUU@LB@3'-UUU...CCGGG AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -10.02 kcal/mol@LB@Hybridization Energy -12.6771 kcal/mol@LB@Unfolding Energy - mRNA 1.72007 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 179 -- 191@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 44 -- 50@LB@ |