86 |
0.006791 |
0.2588 |
bsu17010 |
ymcB |
-10.99 |
0.152529 |
169 -- 190 |
33 -- 52 |
(dimethylallyl)adenosine tRNA methylthiotransferase MiaB |
|
_____________168____________________191\n_____________|______________________|\n5'-AUC...AAGGG____AG__________AA____AAAAU...CGC-3'\n______________UGGA__UUUGGUUUGA__GGAG\n______________:|||__:|||:|:|||__:|||\n______________GCCU__GAACUAGACU__UCUC\n3'-UUU...AAAAA____A___________A_____CCCAA...AUA-5'\n_____________|______________________|\n_____________53_____________________32\n |
178 -- 184 |
38 -- 44 |
-16.81 kcal/mol |
4.84464 kcal/mol |
0.976367 kcal/mol |
168 191@LB@ | |@LB@5'-AUC...AAGGG AG AA AAAAU...CGC-3'@LB@ UGGA UUUGGUUUGA GGAG@LB@ :||| :|||:|:||| :|||@LB@ GCCU GAACUAGACU UCUC@LB@3'-UUU...AAAAA A A CCCAA...AUA-5'@LB@ | |@LB@ 53 32@LB@@LB@@LB@Energy -10.99 kcal/mol@LB@Hybridization Energy -16.81 kcal/mol@LB@Unfolding Energy - mRNA 4.84464 kcal/mol@LB@Unfolding Energy - sRNA 0.976367 kcal/mol@LB@@LB@Position - mRNA 169 -- 190@LB@Position - sRNA 33 -- 52@LB@Position Seed - mRNA 178 -- 184@LB@Position Seed - sRNA 38 -- 44@LB@ |
144 |
0.01244 |
0.2883 |
bsu15720 |
def |
-10.99 |
0.152648 |
175 -- 193 |
31 -- 50 |
peptide deformylase |
|
_____________174___________________194\n_____________|_____________________|\n5'-GCG...UGUAA_____CAC_____________UAACA...AUG-3'\n______________GAUCU___GUCU__UGGAGGG\n______________|||||___:|||__|:|||||\n______________CUAGA___UAGA__AUCUCCC\n3'-UUU...AAAGC_____AC_____CU_______CAACC...AUA-5'\n_____________|_____________________|\n_____________51____________________30\n |
187 -- 193 |
31 -- 37 |
-18.0798 kcal/mol |
6.12249 kcal/mol |
0.970579 kcal/mol |
174 194@LB@ | |@LB@5'-GCG...UGUAA CAC UAACA...AUG-3'@LB@ GAUCU GUCU UGGAGGG@LB@ ||||| :||| |:|||||@LB@ CUAGA UAGA AUCUCCC@LB@3'-UUU...AAAGC AC CU CAACC...AUA-5'@LB@ | |@LB@ 51 30@LB@@LB@@LB@Energy -10.99 kcal/mol@LB@Hybridization Energy -18.0798 kcal/mol@LB@Unfolding Energy - mRNA 6.12249 kcal/mol@LB@Unfolding Energy - sRNA 0.970579 kcal/mol@LB@@LB@Position - mRNA 175 -- 193@LB@Position - sRNA 31 -- 50@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 31 -- 37@LB@ |
25 |
0.0005172 |
0.06638 |
bsu30210 |
bioD |
-10.94 |
0.155183 |
179 -- 210 |
28 -- 53 |
ATP-dependent dethiobiotin synthetase BioD |
|
_____________178_______________________________211\n_____________|_________________________________|\n5'-GUC...UUCAA_____AAG___G___CACAUCAUUU________UUUUU...UCG-3'\n______________UCGGA____GA_CUG__________GAGGGGUU\n______________|||||____||_|||__________||||||||\n______________AGCCU____CU_GAC__________CUCCCCAA\n3'-UUU...AAAAA_____AGAA__A___UAU_______________CCCCU...AUA-5'\n_____________|_________________________________|\n_____________54________________________________27\n |
204 -- 210 |
28 -- 34 |
-21.1469 kcal/mol |
9.22099 kcal/mol |
0.985925 kcal/mol |
178 211@LB@ | |@LB@5'-GUC...UUCAA AAG G CACAUCAUUU UUUUU...UCG-3'@LB@ UCGGA GA CUG GAGGGGUU@LB@ ||||| || ||| ||||||||@LB@ AGCCU CU GAC CUCCCCAA@LB@3'-UUU...AAAAA AGAA A UAU CCCCU...AUA-5'@LB@ | |@LB@ 54 27@LB@@LB@@LB@Energy -10.94 kcal/mol@LB@Hybridization Energy -21.1469 kcal/mol@LB@Unfolding Energy - mRNA 9.22099 kcal/mol@LB@Unfolding Energy - sRNA 0.985925 kcal/mol@LB@@LB@Position - mRNA 179 -- 210@LB@Position - sRNA 28 -- 53@LB@Position Seed - mRNA 204 -- 210@LB@Position Seed - sRNA 28 -- 34@LB@ |
145 |
0.01267 |
0.2913 |
bsu36760 |
murAA |
-10.92 |
0.156018 |
188 -- 194 |
30 -- 36 |
UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 |
|
_____________187_____195\n_____________|_______|\n5'-UAG...GACGC_______AAUAC...UAU-3'\n______________GGAGGGG\n______________:||||||\n______________UCUCCCC\n3'-UUU...GACUA_______AACCC...AUA-5'\n_____________|_______|\n_____________37______29\n |
188 -- 194 |
30 -- 36 |
-13.3986 kcal/mol |
2.34028 kcal/mol |
0.133643 kcal/mol |
187 195@LB@ | |@LB@5'-UAG...GACGC AAUAC...UAU-3'@LB@ GGAGGGG@LB@ :||||||@LB@ UCUCCCC@LB@3'-UUU...GACUA AACCC...AUA-5'@LB@ | |@LB@ 37 29@LB@@LB@@LB@Energy -10.92 kcal/mol@LB@Hybridization Energy -13.3986 kcal/mol@LB@Unfolding Energy - mRNA 2.34028 kcal/mol@LB@Unfolding Energy - sRNA 0.133643 kcal/mol@LB@@LB@Position - mRNA 188 -- 194@LB@Position - sRNA 30 -- 36@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 30 -- 36@LB@ |
194 |
0.01929 |
0.3269 |
bsu14860 |
pycA |
-10.87 |
0.159030 |
149 -- 193 |
23 -- 51 |
pyruvate carboxylase |
|
_____________148___________________________________________194\n_____________|_____________________________________________|\n5'-GGG...GGGAA____AUUCCGCUA_______UUAUAUUCCAUUC____AAG_____GAAAA...UUG-3'\n______________GGAU_________UGAUAGA_____________GGGU___GGGGA\n______________||||_________|||||||_____________||||___|||||\n______________CCUA_________ACUAUCU_____________CCCA___CCCCU\n3'-UUU...AAAAG____GAACUAG_________C________________A_______UGUCU...AUA-5'\n_____________|_____________________________________________|\n_____________52____________________________________________22\n |
162 -- 168 |
34 -- 40 |
-22.9068 kcal/mol |
11.0566 kcal/mol |
0.980049 kcal/mol |
148 194@LB@ | |@LB@5'-GGG...GGGAA AUUCCGCUA UUAUAUUCCAUUC AAG GAAAA...UUG-3'@LB@ GGAU UGAUAGA GGGU GGGGA@LB@ |||| ||||||| |||| |||||@LB@ CCUA ACUAUCU CCCA CCCCU@LB@3'-UUU...AAAAG GAACUAG C A UGUCU...AUA-5'@LB@ | |@LB@ 52 22@LB@@LB@@LB@Energy -10.87 kcal/mol@LB@Hybridization Energy -22.9068 kcal/mol@LB@Unfolding Energy - mRNA 11.0566 kcal/mol@LB@Unfolding Energy - sRNA 0.980049 kcal/mol@LB@@LB@Position - mRNA 149 -- 193@LB@Position - sRNA 23 -- 51@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 34 -- 40@LB@ |
159 |
0.01439 |
0.3008 |
bsu00560 |
spoVT |
-10.85 |
0.160189 |
242 -- 254 |
41 -- 53 |
stage V sporulation protein T |
|
_____________241___________255\n_____________|_____________|\n5'-ACA...UUAGG_______G_____CCUAA...CGC-3'\n______________UCGGGUC_UGAUU\n______________||||:||_||||:\n______________AGCCUAG_ACUAG\n3'-UUU...AAAAA_______A_____ACUAU...AUA-5'\n_____________|_____________|\n_____________54____________40\n |
242 -- 248 |
47 -- 53 |
-14.0147 kcal/mol |
2.18551 kcal/mol |
0.979862 kcal/mol |
241 255@LB@ | |@LB@5'-ACA...UUAGG G CCUAA...CGC-3'@LB@ UCGGGUC UGAUU@LB@ ||||:|| ||||:@LB@ AGCCUAG ACUAG@LB@3'-UUU...AAAAA A ACUAU...AUA-5'@LB@ | |@LB@ 54 40@LB@@LB@@LB@Energy -10.85 kcal/mol@LB@Hybridization Energy -14.0147 kcal/mol@LB@Unfolding Energy - mRNA 2.18551 kcal/mol@LB@Unfolding Energy - sRNA 0.979862 kcal/mol@LB@@LB@Position - mRNA 242 -- 254@LB@Position - sRNA 41 -- 53@LB@Position Seed - mRNA 242 -- 248@LB@Position Seed - sRNA 47 -- 53@LB@ |
186 |
0.01872 |
0.3269 |
bsu09880 |
yhaR |
-10.74 |
0.166509 |
137 -- 152 |
16 -- 29 |
enoyl-CoA hydratase/isomerase YhaR |
|
_____________136______________153\n_____________|________________|\n5'-CAG...UUUAU_______UG_______AUGUA...AAU-3'\n______________UUGGGGA__GCGGGGA\n______________|||||||__:|:|:||\n______________AACCCCU__UGUCUCU\n3'-UUU...UCCCC________________CAUCG...AUA-5'\n_____________|________________|\n_____________30_______________15\n |
146 -- 152 |
16 -- 22 |
-19.1675 kcal/mol |
2.41685 kcal/mol |
6.01276 kcal/mol |
136 153@LB@ | |@LB@5'-CAG...UUUAU UG AUGUA...AAU-3'@LB@ UUGGGGA GCGGGGA@LB@ ||||||| :|:|:||@LB@ AACCCCU UGUCUCU@LB@3'-UUU...UCCCC CAUCG...AUA-5'@LB@ | |@LB@ 30 15@LB@@LB@@LB@Energy -10.74 kcal/mol@LB@Hybridization Energy -19.1675 kcal/mol@LB@Unfolding Energy - mRNA 2.41685 kcal/mol@LB@Unfolding Energy - sRNA 6.01276 kcal/mol@LB@@LB@Position - mRNA 137 -- 152@LB@Position - sRNA 16 -- 29@LB@Position Seed - mRNA 146 -- 152@LB@Position Seed - sRNA 16 -- 22@LB@ |
197 |
0.0195 |
0.3269 |
bsu04670 |
rsbRA |
-10.67 |
0.170227 |
19 -- 37 |
34 -- 52 |
RsbT co-antagonist protein RsbRA |
|
_____________18__________________38\n_____________|___________________|\n5'-CGG...UCAUC_____GA___AA_______UAAGG...AAU-3'\n______________UGGAU__UGA__UGAUGGA\n______________:||||__|||__||||:||\n______________GCCUA__ACU__ACUAUCU\n3'-UUU...AAAAA_____GA___AG_______CCCCA...AUA-5'\n_____________|___________________|\n_____________53__________________33\n |
31 -- 37 |
34 -- 40 |
-17.5102 kcal/mol |
5.86002 kcal/mol |
0.976339 kcal/mol |
18 38@LB@ | |@LB@5'-CGG...UCAUC GA AA UAAGG...AAU-3'@LB@ UGGAU UGA UGAUGGA@LB@ :|||| ||| ||||:||@LB@ GCCUA ACU ACUAUCU@LB@3'-UUU...AAAAA GA AG CCCCA...AUA-5'@LB@ | |@LB@ 53 33@LB@@LB@@LB@Energy -10.67 kcal/mol@LB@Hybridization Energy -17.5102 kcal/mol@LB@Unfolding Energy - mRNA 5.86002 kcal/mol@LB@Unfolding Energy - sRNA 0.976339 kcal/mol@LB@@LB@Position - mRNA 19 -- 37@LB@Position - sRNA 34 -- 52@LB@Position Seed - mRNA 31 -- 37@LB@Position Seed - sRNA 34 -- 40@LB@ |
102 |
0.008773 |
0.2778 |
bsu06170 |
ydjE |
-10.58 |
0.175640 |
264 -- 284 |
30 -- 50 |
sugar kinase YdjE |
|
_____________263___________________285\n_____________|_____________________|\n5'-GGG...AUGUU__CG_______A_____A___CGCCA...AAA-3'\n______________GA__UUGAUUU_AUGGA_GGG\n______________||__|||||:|_||:||_|||\n______________CU__AACUAGA_UAUCU_CCC\n3'-UUU...AAAGC__AG_______C_____C___AACCC...AUA-5'\n_____________|_____________________|\n_____________51____________________29\n |
268 -- 274 |
40 -- 46 |
-17.5575 kcal/mol |
6.00068 kcal/mol |
0.974272 kcal/mol |
263 285@LB@ | |@LB@5'-GGG...AUGUU CG A A CGCCA...AAA-3'@LB@ GA UUGAUUU AUGGA GGG@LB@ || |||||:| ||:|| |||@LB@ CU AACUAGA UAUCU CCC@LB@3'-UUU...AAAGC AG C C AACCC...AUA-5'@LB@ | |@LB@ 51 29@LB@@LB@@LB@Energy -10.58 kcal/mol@LB@Hybridization Energy -17.5575 kcal/mol@LB@Unfolding Energy - mRNA 6.00068 kcal/mol@LB@Unfolding Energy - sRNA 0.974272 kcal/mol@LB@@LB@Position - mRNA 264 -- 284@LB@Position - sRNA 30 -- 50@LB@Position Seed - mRNA 268 -- 274@LB@Position Seed - sRNA 40 -- 46@LB@ |
147 |
0.013 |
0.2949 |
bsu12910 |
proG |
-10.46 |
0.183122 |
211 -- 241 |
23 -- 53 |
pyrroline-5-carboxylate reductase 3 |
|
_____________210________________________________242\n_____________|__________________________________|\n5'-UUC...ACAGA_____________G____U___CAGCA___C___UAUGA...UUG-3'\n______________UUGGAUU__GAUU_GAUA__GG_____UGG_GGA\n______________|:||||:__|||:_||||__||_____|||_|||\n______________AGCCUAG__CUAG_CUAU__CC_____ACC_CCU\n3'-UUU...AAAAA_______AA____A____CU__CCA_________UGUCU...AUA-5'\n_____________|__________________________________|\n_____________54_________________________________22\n |
211 -- 217 |
47 -- 53 |
-18.7228 kcal/mol |
7.27559 kcal/mol |
0.987321 kcal/mol |
210 242@LB@ | |@LB@5'-UUC...ACAGA G U CAGCA C UAUGA...UUG-3'@LB@ UUGGAUU GAUU GAUA GG UGG GGA@LB@ |:||||: |||: |||| || ||| |||@LB@ AGCCUAG CUAG CUAU CC ACC CCU@LB@3'-UUU...AAAAA AA A CU CCA UGUCU...AUA-5'@LB@ | |@LB@ 54 22@LB@@LB@@LB@Energy -10.46 kcal/mol@LB@Hybridization Energy -18.7228 kcal/mol@LB@Unfolding Energy - mRNA 7.27559 kcal/mol@LB@Unfolding Energy - sRNA 0.987321 kcal/mol@LB@@LB@Position - mRNA 211 -- 241@LB@Position - sRNA 23 -- 53@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 47 -- 53@LB@ |