| 95 |
0.004301 |
0.1596 |
stm4114 |
pflD |
-11.77 |
0.360092 |
46 -- 100 |
34 -- 88 |
formate C-acetyltransferase |
stm0843 |
_____________45_____________________101\n_____________|______________________|\n5'-UUU...CGGUA_______C______________GAACA...AGA-3'\n______________AAACGCG_CGACGC__CAUUAU\n______________||||:|:_|:||:|__|||:|:\n______________UUUGUGU_GUUGUG__GUAGUG\n3'-UUU...UAACG_______U______UU______UUGGC...UCA-5'\n_____________|______________________|\n_____________89_____________________33\n |
46 -- 52 |
82 -- 88 |
-16.7675 kcal/mol |
5.49067 kcal/mol |
5.48747 kcal/mol |
45 101@LB@ | |@LB@5'-UUU...CGGUA C GAACA...AGA-3'@LB@ AAACGCG CGACGC CAUUAU@LB@ ||||:|: |:||:| |||:|:@LB@ UUUGUGU GUUGUG GUAGUG@LB@3'-UUU...UAACG U UU UUGGC...UCA-5'@LB@ | |@LB@ 89 33@LB@@LB@@LB@Energy -11.77 kcal/mol@LB@Hybridization Energy -16.7675 kcal/mol@LB@Unfolding Energy - mRNA 5.49067 kcal/mol@LB@Unfolding Energy - sRNA 5.48747 kcal/mol@LB@@LB@Position - mRNA 46 -- 100@LB@Position - sRNA 34 -- 88@LB@Position Seed - mRNA 46 -- 52@LB@Position Seed - sRNA 82 -- 88@LB@ |
| 162 |
0.00849 |
0.1864 |
stm4221 |
pgi |
-15.16 |
0.111294 |
249 -- 289 |
56 -- 88 |
glucose-6-phosphate isomerase |
|
_____________248_______________________________________290\n_____________|_________________________________________|\n5'-GCU...UCCAG______U_____GAAAUGAAA_____________C______UUUCG...ACG-3'\n______________AAACAC_ACGAU_________GACGUUACGAUCG_UGAGCU\n______________||||||_||:|:_________:||:|:||:|:||_|:|||:\n______________UUUGUG_UGUUG_________UUGUAGUGUUGGC_AUUCGG\n3'-UUU...UAACG______U_____UG___________________________UUUUC...UCA-5'\n_____________|_________________________________________|\n_____________89________________________________________55\n |
272 -- 278 |
66 -- 72 |
-30.3131 kcal/mol |
6.22888 kcal/mol |
11.698 kcal/mol |
248 290@LB@ | |@LB@5'-GCU...UCCAG U GAAAUGAAA C UUUCG...ACG-3'@LB@ AAACAC ACGAU GACGUUACGAUCG UGAGCU@LB@ |||||| ||:|: :||:|:||:|:|| |:|||:@LB@ UUUGUG UGUUG UUGUAGUGUUGGC AUUCGG@LB@3'-UUU...UAACG U UG UUUUC...UCA-5'@LB@ | |@LB@ 89 55@LB@@LB@@LB@Energy -15.16 kcal/mol@LB@Hybridization Energy -30.3131 kcal/mol@LB@Unfolding Energy - mRNA 6.22888 kcal/mol@LB@Unfolding Energy - sRNA 11.698 kcal/mol@LB@@LB@Position - mRNA 249 -- 289@LB@Position - sRNA 56 -- 88@LB@Position Seed - mRNA 272 -- 278@LB@Position Seed - sRNA 66 -- 72@LB@ |
| 178 |
0.009774 |
0.1951 |
stm2667 |
pheA |
-14.20 |
0.157815 |
177 -- 228 |
36 -- 93 |
chorismate mutase |
|
_____________176__________________229\n_____________|____________________|\n5'-GAC...ACAAA___G______C_________GGAAA...UUG-3'\n______________AAA_GCAACA_UAUGACAUC\n______________|||_:|||||_:|::|||||\n______________UUU_UGUUGU_GUGUUGUAG\n3'-UUU...UAACG___G______U_________UGUUG...UCA-5'\n_____________|____________________|\n_____________94___________________35\n |
202 -- 208 |
69 -- 75 |
-17.8987 kcal/mol |
1.45353 kcal/mol |
4.11387 kcal/mol |
176 229@LB@ | |@LB@5'-GAC...ACAAA G C GGAAA...UUG-3'@LB@ AAA GCAACA UAUGACAUC@LB@ ||| :||||| :|::|||||@LB@ UUU UGUUGU GUGUUGUAG@LB@3'-UUU...UAACG G U UGUUG...UCA-5'@LB@ | |@LB@ 94 35@LB@@LB@@LB@Energy -14.20 kcal/mol@LB@Hybridization Energy -17.8987 kcal/mol@LB@Unfolding Energy - mRNA 1.45353 kcal/mol@LB@Unfolding Energy - sRNA 4.11387 kcal/mol@LB@@LB@Position - mRNA 177 -- 228@LB@Position - sRNA 36 -- 93@LB@Position Seed - mRNA 202 -- 208@LB@Position Seed - sRNA 69 -- 75@LB@ |
| 92 |
0.004229 |
0.1596 |
stm0669 |
phoL |
-19.39 |
0.022083 |
221 -- 286 |
36 -- 89 |
putative phosphate starvation-inducible protein ATP-binding |
|
_____________220__________________________________________________________________287\n_____________|____________________________________________________________________|\n5'-AAA...CGAUA_________G__GAACAGUUUGAAUAUA____C______AAUUAC___UU____________CA____CCGUC...GCC-3'\n______________CAGACACAA_AG________________GACA_UCGCGA_______CC__GAGCCCG_CAGA__ACGC\n______________||:||||||_|:________________:|||_||:|:|_______||__:|||||:_||||__||||\n______________GUUUGUGUU_UU________________UUGU_AGUGUU_______GG__UUCGGGU_GUCU__UGCG\n3'-UUU...UUAAC_________G__GUG________________________GGCAUUC__UU_______A____UG____UAAGG...UCA-5'\n_____________|____________________________________________________________________|\n_____________90___________________________________________________________________35\n |
270 -- 276 |
47 -- 53 |
-43.5648 kcal/mol |
9.30805 kcal/mol |
22.4875 kcal/mol |
220 287@LB@ | |@LB@5'-AAA...CGAUA G GAACAGUUUGAAUAUA C AAUUAC UU CA CCGUC...GCC-3'@LB@ CAGACACAA AG GACA UCGCGA CC GAGCCCG CAGA ACGC@LB@ ||:|||||| |: :||| ||:|:| || :|||||: |||| ||||@LB@ GUUUGUGUU UU UUGU AGUGUU GG UUCGGGU GUCU UGCG@LB@3'-UUU...UUAAC G GUG GGCAUUC UU A UG UAAGG...UCA-5'@LB@ | |@LB@ 90 35@LB@@LB@@LB@Energy -19.39 kcal/mol@LB@Hybridization Energy -43.5648 kcal/mol@LB@Unfolding Energy - mRNA 9.30805 kcal/mol@LB@Unfolding Energy - sRNA 22.4875 kcal/mol@LB@@LB@Position - mRNA 221 -- 286@LB@Position - sRNA 36 -- 89@LB@Position Seed - mRNA 270 -- 276@LB@Position Seed - sRNA 47 -- 53@LB@ |
| 200 |
0.01112 |
0.198 |
stm2809 |
proV |
-15.77 |
0.088450 |
57 -- 94 |
50 -- 85 |
glycine betaine/L-proline ABC transporter ATP-binding protein |
|
_____________56______________________________________95\n_____________|_______________________________________|\n5'-UUC...AUCAC_____________C__________AUUCAU_________AAAUU...AAA-3'\n______________AGC_CGAUAGCAC____UCGCAAU______GCCAGAAGC\n______________|:|_|:|:|:|||____||:|||:______||||:||||\n______________UUG_GUUGUUGUG____AGUGUUG______CGGUUUUCG\n3'-UUU...AACGU___U_________UUGU_______GCAUU__________GGUAG...UCA-5'\n_____________|_______________________________________|\n_____________86______________________________________49\n |
65 -- 71 |
75 -- 81 |
-32.303 kcal/mol |
6.98444 kcal/mol |
14.5427 kcal/mol |
56 95@LB@ | |@LB@5'-UUC...AUCAC C AUUCAU AAAUU...AAA-3'@LB@ AGC CGAUAGCAC UCGCAAU GCCAGAAGC@LB@ |:| |:|:|:||| ||:|||: ||||:||||@LB@ UUG GUUGUUGUG AGUGUUG CGGUUUUCG@LB@3'-UUU...AACGU U UUGU GCAUU GGUAG...UCA-5'@LB@ | |@LB@ 86 49@LB@@LB@@LB@Energy -15.77 kcal/mol@LB@Hybridization Energy -32.303 kcal/mol@LB@Unfolding Energy - mRNA 6.98444 kcal/mol@LB@Unfolding Energy - sRNA 14.5427 kcal/mol@LB@@LB@Position - mRNA 57 -- 94@LB@Position - sRNA 50 -- 85@LB@Position Seed - mRNA 65 -- 71@LB@Position Seed - sRNA 75 -- 81@LB@ |
| 98 |
0.004857 |
0.1728 |
stm2811 |
proX |
-15.53 |
0.097032 |
195 -- 224 |
56 -- 84 |
glycine betaine ABC transporter substrate-binding protein |
|
_____________194________________________225\n_____________|__________________________|\n5'-GCA...AAGGA__________________________UAUUU...CUA-3'\n______________ACAACGAUGCGACAU____ACCGUGA\n______________|||||:|::|:||||____|||||:|\n______________UGUUGUUGUGUUGUA____UGGCAUU\n3'-UUU...GUUUG_______________GUGU_______CGGUU...UCA-5'\n_____________|__________________________|\n_____________85_________________________55\n |
210 -- 216 |
59 -- 65 |
-26.0076 kcal/mol |
3.5169 kcal/mol |
9.80321 kcal/mol |
194 225@LB@ | |@LB@5'-GCA...AAGGA UAUUU...CUA-3'@LB@ ACAACGAUGCGACAU ACCGUGA@LB@ |||||:|::|:|||| |||||:|@LB@ UGUUGUUGUGUUGUA UGGCAUU@LB@3'-UUU...GUUUG GUGU CGGUU...UCA-5'@LB@ | |@LB@ 85 55@LB@@LB@@LB@Energy -15.53 kcal/mol@LB@Hybridization Energy -26.0076 kcal/mol@LB@Unfolding Energy - mRNA 3.5169 kcal/mol@LB@Unfolding Energy - sRNA 9.80321 kcal/mol@LB@@LB@Position - mRNA 195 -- 224@LB@Position - sRNA 56 -- 84@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 59 -- 65@LB@ |
| 8 |
9.263e-05 |
0.04123 |
stm0369 |
prpC |
-29.42 |
0.000431 |
202 -- 269 |
31 -- 91 |
2-methylcitrate synthase |
|
_____________201______________________________________________________________270\n_____________|________________________________________________________________|\n5'-AAC...CAAUA__A_____________C_U___AA_____A__CAU____UU______AAAAA_____U______UUUCC...GUA-3'\n______________UG_CAGACACGACGAU_C_GCA__ACAAC_CG___GUCA__AAGCCU_____AUCGG__CGCGC\n______________||_||:||||:||:|:_|_:||__|||||_||___|:||__|||||:_____|||:|__|:|||\n______________AC_GUUUGUGUUGUUG_G_UGU__UGUUG_GC___CGGU__UUCGGG_____UAGUC__GUGCG\n3'-UUU...GGUUA________________U_U___AG________AUU____U_________________UU_____UAAGG...UCA-5'\n_____________|________________________________________________________________|\n_____________92_______________________________________________________________30\n |
211 -- 217 |
77 -- 83 |
-51.7305 kcal/mol |
8.34164 kcal/mol |
22.503 kcal/mol |
201 270@LB@ | |@LB@5'-AAC...CAAUA A C U AA A CAU UU AAAAA U UUUCC...GUA-3'@LB@ UG CAGACACGACGAU C GCA ACAAC CG GUCA AAGCCU AUCGG CGCGC@LB@ || ||:||||:||:|: | :|| ||||| || |:|| |||||: |||:| |:|||@LB@ AC GUUUGUGUUGUUG G UGU UGUUG GC CGGU UUCGGG UAGUC GUGCG@LB@3'-UUU...GGUUA U U AG AUU U UU UAAGG...UCA-5'@LB@ | |@LB@ 92 30@LB@@LB@@LB@Energy -29.42 kcal/mol@LB@Hybridization Energy -51.7305 kcal/mol@LB@Unfolding Energy - mRNA 8.34164 kcal/mol@LB@Unfolding Energy - sRNA 22.503 kcal/mol@LB@@LB@Position - mRNA 202 -- 269@LB@Position - sRNA 31 -- 91@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 77 -- 83@LB@ |
| 184 |
0.01016 |
0.1966 |
stm1690 |
pspA |
-15.34 |
0.103900 |
116 -- 183 |
38 -- 113 |
phage shock protein PspA |
|
_____________115____________________________________________________184\n_____________|______________________________________________________|\n5'-GCC...UAUCA_____A____AAGU_G___C__A_______UUAAU__________G________CCGUU...UUC-3'\n______________GUGGU_UGAA____U_GCA_GC_AAUUGUA_____CAC_AUAGCA_GGCAUCGC\n______________|||||_||||____|_|||_:|_|||||:|_____|||_|:|:||_::||||:|\n______________CACCA_ACUU____A_CGU_UG_UUAACGU_____GUG_UGUUGU_UUGUAGUG\n3'-UUU...GAUGG_____G_________G___C__G_______UU______U______G________UUGGC...UCA-5'\n_____________|______________________________________________________|\n_____________114____________________________________________________37\n |
162 -- 168 |
67 -- 73 |
-39.4413 kcal/mol |
11.996 kcal/mol |
15.147 kcal/mol |
115 184@LB@ | |@LB@5'-GCC...UAUCA A AAGU G C A UUAAU G CCGUU...UUC-3'@LB@ GUGGU UGAA U GCA GC AAUUGUA CAC AUAGCA GGCAUCGC@LB@ ||||| |||| | ||| :| |||||:| ||| |:|:|| ::||||:|@LB@ CACCA ACUU A CGU UG UUAACGU GUG UGUUGU UUGUAGUG@LB@3'-UUU...GAUGG G G C G UU U G UUGGC...UCA-5'@LB@ | |@LB@ 114 37@LB@@LB@@LB@Energy -15.34 kcal/mol@LB@Hybridization Energy -39.4413 kcal/mol@LB@Unfolding Energy - mRNA 11.996 kcal/mol@LB@Unfolding Energy - sRNA 15.147 kcal/mol@LB@@LB@Position - mRNA 116 -- 183@LB@Position - sRNA 38 -- 113@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 67 -- 73@LB@ |
| 100 |
0.00495 |
0.1728 |
stm1879 |
ptrB |
-19.83 |
0.018631 |
144 -- 223 |
40 -- 120 |
oligopeptidase B |
|
_____________143____________________________________________224\n_____________|______________________________________________|\n5'-AAG...UAUAA_________________AAGAAAAA_____A___U___________AAUCG...AGC-3'\n______________CAAAUAU__UAACGCAA________ACGAC_UGU__GCCAAAAGCC\n______________||||:|:__:|||:|||________||:||_:||__||||||||||\n______________GUUUGUG__GUUGUGUU________UGUUG_GCA__CGGUUUUCGG\n3'-UUU...UUAAC_______UU________GUAG_____________UU__________GUAGU...UCA-5'\n_____________|______________________________________________|\n_____________121____________________________________________39\n |
209 -- 215 |
49 -- 55 |
-34.4525 kcal/mol |
3.62291 kcal/mol |
15.2208 kcal/mol |
143 224@LB@ | |@LB@5'-AAG...UAUAA AAGAAAAA A U AAUCG...AGC-3'@LB@ CAAAUAU UAACGCAA ACGAC UGU GCCAAAAGCC@LB@ ||||:|: :|||:||| ||:|| :|| ||||||||||@LB@ GUUUGUG GUUGUGUU UGUUG GCA CGGUUUUCGG@LB@3'-UUU...UUAAC UU GUAG UU GUAGU...UCA-5'@LB@ | |@LB@ 121 39@LB@@LB@@LB@Energy -19.83 kcal/mol@LB@Hybridization Energy -34.4525 kcal/mol@LB@Unfolding Energy - mRNA 3.62291 kcal/mol@LB@Unfolding Energy - sRNA 15.2208 kcal/mol@LB@@LB@Position - mRNA 144 -- 223@LB@Position - sRNA 40 -- 120@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 49 -- 55@LB@ |
| 90 |
0.004161 |
0.1596 |
stm1124 |
putA |
-17.89 |
0.039481 |
159 -- 201 |
125 -- 168 |
trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase |
|
_____________158______________________________________________202\n_____________|________________________________________________|\n5'-UAA...CGCUA____U___UUA________A_C____A_____________________UGGGA...UAA-3'\n______________ACUA_UGG___GCAGAUAG_G_GAAU__ACAGG_AGU___AGAGGGUA\n______________||||_|||___:||||:||_|_:|||__|||||_|||___|:||||||\n______________UGAU_ACC___UGUCUGUC_C_UUUA__UGUCC_UCA___UUUCCCAU\n3'-UUU...AUUAG___________________C_A____CA_____U___CUU________CAGAG...UCA-5'\n_____________|________________________________________________|\n_____________169______________________________________________124\n |
195 -- 201 |
125 -- 131 |
-33.9858 kcal/mol |
7.26317 kcal/mol |
8.4265 kcal/mol |
158 202@LB@ | |@LB@5'-UAA...CGCUA U UUA A C A UGGGA...UAA-3'@LB@ ACUA UGG GCAGAUAG G GAAU ACAGG AGU AGAGGGUA@LB@ |||| ||| :||||:|| | :||| ||||| ||| |:||||||@LB@ UGAU ACC UGUCUGUC C UUUA UGUCC UCA UUUCCCAU@LB@3'-UUU...AUUAG C A CA U CUU CAGAG...UCA-5'@LB@ | |@LB@ 169 124@LB@@LB@@LB@Energy -17.89 kcal/mol@LB@Hybridization Energy -33.9858 kcal/mol@LB@Unfolding Energy - mRNA 7.26317 kcal/mol@LB@Unfolding Energy - sRNA 8.4265 kcal/mol@LB@@LB@Position - mRNA 159 -- 201@LB@Position - sRNA 125 -- 168@LB@Position Seed - mRNA 195 -- 201@LB@Position Seed - sRNA 125 -- 131@LB@ |
