109 |
0.02227 |
0.6177 |
b4040 |
ubiA |
-8.97 |
0.066674 |
182 -- 194 |
44 -- 55 |
p-hydroxybenzoate octaprenyltransferase |
|
_____________181___________195\n_____________|_____________|\n5'-AGC...CCGUU__A_U________AAAAA...UAU-3'\n______________GU_C_AAGAGGAA\n______________||_|_||||||||\n______________CA_G_UUCUCCUU\n3'-UUU...CCGGG____U________AAAGU...ACA-5'\n_____________|_____________|\n_____________56____________43\n |
188 -- 194 |
44 -- 50 |
-10.7786 kcal/mol |
0.870226 kcal/mol |
0.941432 kcal/mol |
181 195@LB@ | |@LB@5'-AGC...CCGUU A U AAAAA...UAU-3'@LB@ GU C AAGAGGAA@LB@ || | ||||||||@LB@ CA G UUCUCCUU@LB@3'-UUU...CCGGG U AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -8.97 kcal/mol@LB@Hybridization Energy -10.7786 kcal/mol@LB@Unfolding Energy - mRNA 0.870226 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 182 -- 194@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 44 -- 50@LB@ |
99 |
0.01953 |
0.6177 |
b2473 |
ypfH |
-12.09 |
0.015349 |
8 -- 40 |
44 -- 76 |
palmitoyl-CoA esterase activity uncertain physiological substrate |
|
_____________7__________________________________41\n_____________|__________________________________|\n____5'-ACUUUCA_____CAAGA_____C___________C______GAGGC...GGG-3'\n______________GGCCG_____UGUUA_UGGUCCGUCAG_G_GGAA\n______________||||:_____:|:||_|||:||||||:_|_||||\n______________CCGGU_____GCGAU_ACCGGGCAGUU_C_CCUU\n___3'-UUUUUUUA_____UAUA______A___________U_U____AAAGU...ACA-5'\n_____________|__________________________________|\n_____________77_________________________________43\n |
28 -- 34 |
51 -- 57 |
-34.8713 kcal/mol |
9.35151 kcal/mol |
13.433 kcal/mol |
7 41@LB@ | |@LB@ 5'-ACUUUCA CAAGA C C GAGGC...GGG-3'@LB@ GGCCG UGUUA UGGUCCGUCAG G GGAA@LB@ ||||: :|:|| |||:||||||: | ||||@LB@ CCGGU GCGAU ACCGGGCAGUU C CCUU@LB@ 3'-UUUUUUUA UAUA A U U AAAGU...ACA-5'@LB@ | |@LB@ 77 43@LB@@LB@@LB@Energy -12.09 kcal/mol@LB@Hybridization Energy -34.8713 kcal/mol@LB@Unfolding Energy - mRNA 9.35151 kcal/mol@LB@Unfolding Energy - sRNA 13.433 kcal/mol@LB@@LB@Position - mRNA 8 -- 40@LB@Position - sRNA 44 -- 76@LB@Position Seed - mRNA 28 -- 34@LB@Position Seed - sRNA 51 -- 57@LB@ |
163 |
0.03345 |
0.6177 |
b1235 |
rssB |
-5.20 |
0.346272 |
186 -- 195 |
44 -- 55 |
PcnB-degradosome interaction factor; response regulator |
|
_____________185__________196\n_____________|____________|\n5'-AAU...AGCCA____________AGAAC...CAA-3'\n______________GUC__AGGGGAG\n______________|||__||:|||:\n______________CAG__UCUCCUU\n3'-UUU...CCGGG___UU_______AAAGU...ACA-5'\n_____________|____________|\n_____________56___________43\n |
189 -- 195 |
44 -- 50 |
-10.1709 kcal/mol |
4.02871 kcal/mol |
0.941432 kcal/mol |
185 196@LB@ | |@LB@5'-AAU...AGCCA AGAAC...CAA-3'@LB@ GUC AGGGGAG@LB@ ||| ||:|||:@LB@ CAG UCUCCUU@LB@3'-UUU...CCGGG UU AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -5.20 kcal/mol@LB@Hybridization Energy -10.1709 kcal/mol@LB@Unfolding Energy - mRNA 4.02871 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |
55 |
0.01149 |
0.6177 |
b3287 |
def |
-9.61 |
0.049470 |
133 -- 146 |
41 -- 54 |
peptide deformylase |
|
_____________132____________147\n_____________|______________|\n5'-AUA...GUCAA______________GUCUA...AUG-3'\n______________UCAGAGGGGGAUUU\n______________|||:||:||:||||\n______________AGUUUCUCCUUAAA\n3'-UUU...CGGGC______________GUAAA...ACA-5'\n_____________|______________|\n_____________55_____________40\n |
140 -- 146 |
41 -- 47 |
-17.2173 kcal/mol |
6.66439 kcal/mol |
0.946064 kcal/mol |
132 147@LB@ | |@LB@5'-AUA...GUCAA GUCUA...AUG-3'@LB@ UCAGAGGGGGAUUU@LB@ |||:||:||:||||@LB@ AGUUUCUCCUUAAA@LB@3'-UUU...CGGGC GUAAA...ACA-5'@LB@ | |@LB@ 55 40@LB@@LB@@LB@Energy -9.61 kcal/mol@LB@Hybridization Energy -17.2173 kcal/mol@LB@Unfolding Energy - mRNA 6.66439 kcal/mol@LB@Unfolding Energy - sRNA 0.946064 kcal/mol@LB@@LB@Position - mRNA 133 -- 146@LB@Position - sRNA 41 -- 54@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 41 -- 47@LB@ |
92 |
0.01873 |
0.6177 |
b2297 |
pta |
-7.94 |
0.106741 |
187 -- 219 |
22 -- 52 |
phosphate acetyltransferase |
|
_____________186_______________________________220\n_____________|_________________________________|\n5'-CGC...UAACG________UAAAC___GUCCCG___________UGAUC...GUC-3'\n______________AAAGAGGA_____CGU______UAUUAUUAUGC\n______________||||||||_____|:|______|||||||||||\n______________UUUCUCCU_____GUA______AUAAUAAUACG\n3'-UUU...GGCAG________UAAA____AAAAA____________GCAGU...ACA-5'\n_____________|_________________________________|\n_____________53________________________________21\n |
213 -- 219 |
22 -- 28 |
-21.7034 kcal/mol |
9.76868 kcal/mol |
3.9903 kcal/mol |
186 220@LB@ | |@LB@5'-CGC...UAACG UAAAC GUCCCG UGAUC...GUC-3'@LB@ AAAGAGGA CGU UAUUAUUAUGC@LB@ |||||||| |:| |||||||||||@LB@ UUUCUCCU GUA AUAAUAAUACG@LB@3'-UUU...GGCAG UAAA AAAAA GCAGU...ACA-5'@LB@ | |@LB@ 53 21@LB@@LB@@LB@Energy -7.94 kcal/mol@LB@Hybridization Energy -21.7034 kcal/mol@LB@Unfolding Energy - mRNA 9.76868 kcal/mol@LB@Unfolding Energy - sRNA 3.9903 kcal/mol@LB@@LB@Position - mRNA 187 -- 219@LB@Position - sRNA 22 -- 52@LB@Position Seed - mRNA 213 -- 219@LB@Position Seed - sRNA 22 -- 28@LB@ |
32 |
0.006131 |
0.6129 |
b2585 |
pssA |
-9.74 |
0.046374 |
32 -- 41 |
45 -- 54 |
phosphatidylserine synthase; CDP-diacylglycerol-serine O-phosphatidyltransferase |
|
_____________31_________42\n_____________|__________|\n5'-CGC...CCAGC__________GAUCG...CCG-3'\n______________UCGAAGAGGG\n______________||:||||||:\n______________AGUUUCUCCU\n3'-UUU...CGGGC__________UAAAG...ACA-5'\n_____________|__________|\n_____________55_________44\n |
35 -- 41 |
45 -- 51 |
-13.2862 kcal/mol |
2.61225 kcal/mol |
0.929144 kcal/mol |
31 42@LB@ | |@LB@5'-CGC...CCAGC GAUCG...CCG-3'@LB@ UCGAAGAGGG@LB@ ||:||||||:@LB@ AGUUUCUCCU@LB@3'-UUU...CGGGC UAAAG...ACA-5'@LB@ | |@LB@ 55 44@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -13.2862 kcal/mol@LB@Unfolding Energy - mRNA 2.61225 kcal/mol@LB@Unfolding Energy - sRNA 0.929144 kcal/mol@LB@@LB@Position - mRNA 32 -- 41@LB@Position - sRNA 45 -- 54@LB@Position Seed - mRNA 35 -- 41@LB@Position Seed - sRNA 45 -- 51@LB@ |
22 |
0.004195 |
0.5992 |
b3715 |
yieH |
-7.44 |
0.134211 |
287 -- 299 |
41 -- 55 |
phosphoenolpyruvate and 6-phosphogluconate phosphatase |
|
_____________286_____________300\n_____________|_______________|\n5'-CUG...ACGAU___UC__________G-3'\n______________GUU____AGGAAUUU\n______________||:____||||||||\n______________CAG____UCCUUAAA\n3'-UUU...CCGGG___UUUC________GUAAA...ACA-5'\n_____________|_______________|\n_____________56______________40\n |
293 -- 299 |
41 -- 47 |
-8.9861 kcal/mol |
0.60049 kcal/mol |
0.947844 kcal/mol |
286 300@LB@ | |@LB@5'-CUG...ACGAU UC G-3'@LB@ GUU AGGAAUUU@LB@ ||: ||||||||@LB@ CAG UCCUUAAA@LB@3'-UUU...CCGGG UUUC GUAAA...ACA-5'@LB@ | |@LB@ 56 40@LB@@LB@@LB@Energy -7.44 kcal/mol@LB@Hybridization Energy -8.9861 kcal/mol@LB@Unfolding Energy - mRNA 0.60049 kcal/mol@LB@Unfolding Energy - sRNA 0.947844 kcal/mol@LB@@LB@Position - mRNA 287 -- 299@LB@Position - sRNA 41 -- 55@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 41 -- 47@LB@ |
65 |
0.01408 |
0.6177 |
b3176 |
glmM |
-9.74 |
0.046438 |
133 -- 141 |
48 -- 56 |
phosphoglucosamine mutase |
|
_____________132_______142\n_____________|_________|\n5'-GUU...CAUGA_________AACCG...CGG-3'\n______________CGUCAAAGA\n______________|||||||||\n______________GCAGUUUCU\n3'-UUU...ACCGG_________CCUUA...ACA-5'\n_____________|_________|\n_____________57________47\n |
135 -- 141 |
48 -- 54 |
-11.8395 kcal/mol |
1.20122 kcal/mol |
0.896433 kcal/mol |
132 142@LB@ | |@LB@5'-GUU...CAUGA AACCG...CGG-3'@LB@ CGUCAAAGA@LB@ |||||||||@LB@ GCAGUUUCU@LB@3'-UUU...ACCGG CCUUA...ACA-5'@LB@ | |@LB@ 57 47@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -11.8395 kcal/mol@LB@Unfolding Energy - mRNA 1.20122 kcal/mol@LB@Unfolding Energy - sRNA 0.896433 kcal/mol@LB@@LB@Position - mRNA 133 -- 141@LB@Position - sRNA 48 -- 56@LB@Position Seed - mRNA 135 -- 141@LB@Position Seed - sRNA 48 -- 54@LB@ |
94 |
0.01884 |
0.6177 |
b2048 |
cpsG |
-10.80 |
0.028164 |
47 -- 56 |
45 -- 54 |
phosphomannomutase |
|
_____________46_________57\n_____________|__________|\n5'-GGG...UUAUC__________UGAUG...GCG-3'\n______________UCGAAGAGGA\n______________||:|||||||\n______________AGUUUCUCCU\n3'-UUU...CGGGC__________UAAAG...ACA-5'\n_____________|__________|\n_____________55_________44\n |
50 -- 56 |
45 -- 51 |
-14.144 kcal/mol |
2.41054 kcal/mol |
0.929144 kcal/mol |
46 57@LB@ | |@LB@5'-GGG...UUAUC UGAUG...GCG-3'@LB@ UCGAAGAGGA@LB@ ||:|||||||@LB@ AGUUUCUCCU@LB@3'-UUU...CGGGC UAAAG...ACA-5'@LB@ | |@LB@ 55 44@LB@@LB@@LB@Energy -10.80 kcal/mol@LB@Hybridization Energy -14.144 kcal/mol@LB@Unfolding Energy - mRNA 2.41054 kcal/mol@LB@Unfolding Energy - sRNA 0.929144 kcal/mol@LB@@LB@Position - mRNA 47 -- 56@LB@Position - sRNA 45 -- 54@LB@Position Seed - mRNA 50 -- 56@LB@Position Seed - sRNA 45 -- 51@LB@ |
76 |
0.01599 |
0.6177 |
b1849 |
purT |
-9.18 |
0.060248 |
187 -- 212 |
25 -- 50 |
phosphoribosylglycinamide formyltransferase 2 |
|
_____________186________________________213\n_____________|__________________________|\n5'-UUU...UAAUC______UA______AUGAC_______GGCAC...GUC-3'\n______________AGGGGA__UUCGUU_____GUUAUUA\n______________||:|||__|||:||_____:||||||\n______________UCUCCU__AAGUAA_____UAAUAAU\n3'-UUU...CAGUU______UA______AAAAA_______ACGGC...ACA-5'\n_____________|__________________________|\n_____________51_________________________24\n |
206 -- 212 |
25 -- 31 |
-15.1619 kcal/mol |
4.88468 kcal/mol |
1.09239 kcal/mol |
186 213@LB@ | |@LB@5'-UUU...UAAUC UA AUGAC GGCAC...GUC-3'@LB@ AGGGGA UUCGUU GUUAUUA@LB@ ||:||| |||:|| :||||||@LB@ UCUCCU AAGUAA UAAUAAU@LB@3'-UUU...CAGUU UA AAAAA ACGGC...ACA-5'@LB@ | |@LB@ 51 24@LB@@LB@@LB@Energy -9.18 kcal/mol@LB@Hybridization Energy -15.1619 kcal/mol@LB@Unfolding Energy - mRNA 4.88468 kcal/mol@LB@Unfolding Energy - sRNA 1.09239 kcal/mol@LB@@LB@Position - mRNA 187 -- 212@LB@Position - sRNA 25 -- 50@LB@Position Seed - mRNA 206 -- 212@LB@Position Seed - sRNA 25 -- 31@LB@ |