101 |
0.026 |
0.6733 |
lmo2768 |
N/A |
-17.52 |
0.032492 |
230 -- 251 |
161 -- 179 |
hypothetical membrane protein |
|
_____________229__________252\n_____________|____________|\n5'-UUA...GUAAU____________CUUUU...UAA-3'\n______________AUGAGAUGGAUG\n______________||||||||:|||\n______________UACUCUACUUAC\n3'-GUU...CCGGU____________UUUUG...GGA-5'\n_____________|____________|\n_____________180__________160\n |
245 -- 251 |
161 -- 167 |
-15.292 kcal/mol |
2.52317 kcal/mol |
0.818518 kcal/mol |
229 252@LB@ | |@LB@5'-UUA...GUAAU CUUUU...UAA-3'@LB@ AUGAGAUGGAUG@LB@ ||||||||:|||@LB@ UACUCUACUUAC@LB@3'-GUU...CCGGU UUUUG...GGA-5'@LB@ | |@LB@ 180 160@LB@@LB@@LB@Energy -17.52 kcal/mol@LB@Hybridization Energy -15.292 kcal/mol@LB@Unfolding Energy - mRNA 2.52317 kcal/mol@LB@Unfolding Energy - sRNA 0.818518 kcal/mol@LB@@LB@Position - mRNA 230 -- 251@LB@Position - sRNA 161 -- 179@LB@Position Seed - mRNA 245 -- 251@LB@Position Seed - sRNA 161 -- 167@LB@ |
102 |
0.02619 |
0.6733 |
lmo1799 |
N/A |
-17.02 |
0.040600 |
38 -- 69 |
171 -- 207 |
peptidoglycan binding protein |
|
_____________37______________70\n_____________|_______________|\n5'-CUA...AAAAC__G____________UUGGC...UGG-3'\n______________GA_GGGA_GGGGCAU\n______________:|_||||_|:|||||\n______________UU_CCCU_CUCCGUA\n3'-GUU...ACGUA__G____A_______UCUGU...GGA-5'\n_____________|_______________|\n_____________208_____________170\n |
45 -- 51 |
193 -- 199 |
-19.1902 kcal/mol |
1.80232 kcal/mol |
8.95053 kcal/mol |
37 70@LB@ | |@LB@5'-CUA...AAAAC G UUGGC...UGG-3'@LB@ GA GGGA GGGGCAU@LB@ :| |||| |:|||||@LB@ UU CCCU CUCCGUA@LB@3'-GUU...ACGUA G A UCUGU...GGA-5'@LB@ | |@LB@ 208 170@LB@@LB@@LB@Energy -17.02 kcal/mol@LB@Hybridization Energy -19.1902 kcal/mol@LB@Unfolding Energy - mRNA 1.80232 kcal/mol@LB@Unfolding Energy - sRNA 8.95053 kcal/mol@LB@@LB@Position - mRNA 38 -- 69@LB@Position - sRNA 171 -- 207@LB@Position Seed - mRNA 45 -- 51@LB@Position Seed - sRNA 193 -- 199@LB@ |
103 |
0.02634 |
0.6733 |
lmo2183 |
N/A |
-17.72 |
0.029644 |
120 -- 189 |
95 -- 172 |
ferrichrome ABC transporter permease |
|
_____________119_______________190\n_____________|_________________|\n5'-AGA...UGUGU____UU___________UUAUU...UCC-3'\n______________AUGA__UGGAUGAAAAU\n______________||||__||:|||||||:\n______________UACU__ACUUACUUUUG\n3'-GUU...CCGGU____CU___________UUUAU...GGA-5'\n_____________|_________________|\n_____________173_______________94\n |
130 -- 136 |
156 -- 162 |
-14.4355 kcal/mol |
3.54286 kcal/mol |
0.922045 kcal/mol |
119 190@LB@ | |@LB@5'-AGA...UGUGU UU UUAUU...UCC-3'@LB@ AUGA UGGAUGAAAAU@LB@ |||| ||:|||||||:@LB@ UACU ACUUACUUUUG@LB@3'-GUU...CCGGU CU UUUAU...GGA-5'@LB@ | |@LB@ 173 94@LB@@LB@@LB@Energy -17.72 kcal/mol@LB@Hybridization Energy -14.4355 kcal/mol@LB@Unfolding Energy - mRNA 3.54286 kcal/mol@LB@Unfolding Energy - sRNA 0.922045 kcal/mol@LB@@LB@Position - mRNA 120 -- 189@LB@Position - sRNA 95 -- 172@LB@Position Seed - mRNA 130 -- 136@LB@Position Seed - sRNA 156 -- 162@LB@ |
104 |
0.02699 |
0.6733 |
lmo1327 |
rbfA |
-16.36 |
0.054483 |
188 -- 240 |
157 -- 199 |
ribosome-binding factor A |
|
_____________187________________241\n_____________|__________________|\n5'-ACA...CGUGU_______CA_________AAGAA...CUG-3'\n______________CAGUGAG___AAUGAAAA\n______________||:||||___||||||||\n______________GUUACUC___UUACUUUU\n3'-GUU...UGCCG_______UAC________GUUUA...GGA-5'\n_____________|__________________|\n_____________200________________156\n |
234 -- 240 |
157 -- 163 |
-12.7883 kcal/mol |
2.00785 kcal/mol |
0.933292 kcal/mol |
187 241@LB@ | |@LB@5'-ACA...CGUGU CA AAGAA...CUG-3'@LB@ CAGUGAG AAUGAAAA@LB@ ||:|||| ||||||||@LB@ GUUACUC UUACUUUU@LB@3'-GUU...UGCCG UAC GUUUA...GGA-5'@LB@ | |@LB@ 200 156@LB@@LB@@LB@Energy -16.36 kcal/mol@LB@Hybridization Energy -12.7883 kcal/mol@LB@Unfolding Energy - mRNA 2.00785 kcal/mol@LB@Unfolding Energy - sRNA 0.933292 kcal/mol@LB@@LB@Position - mRNA 188 -- 240@LB@Position - sRNA 157 -- 199@LB@Position Seed - mRNA 234 -- 240@LB@Position Seed - sRNA 157 -- 163@LB@ |
105 |
0.02711 |
0.6733 |
lmo0347 |
N/A |
-16.41 |
0.053410 |
62 -- 87 |
160 -- 186 |
dihydroxyacetone kinase |
|
_____________61____________________________88\n_____________|_____________________________|\n5'-AUC...GUUGG__________ACU________________UUGGU...AUU-3'\n______________GAACUACGCG___UCGAUG_GAU__AUGA\n______________|||||||:||___:|:|||_|||__||||\n______________CUUGAUGUGC___GGUUAC_CUA__UACU\n3'-GUU...CUGUA__________C________U___CU____UUUGU...GGA-5'\n_____________|_____________________________|\n_____________187___________________________159\n |
65 -- 71 |
177 -- 183 |
-23.7931 kcal/mol |
4.23572 kcal/mol |
9.57505 kcal/mol |
61 88@LB@ | |@LB@5'-AUC...GUUGG ACU UUGGU...AUU-3'@LB@ GAACUACGCG UCGAUG GAU AUGA@LB@ |||||||:|| :|:||| ||| ||||@LB@ CUUGAUGUGC GGUUAC CUA UACU@LB@3'-GUU...CUGUA C U CU UUUGU...GGA-5'@LB@ | |@LB@ 187 159@LB@@LB@@LB@Energy -16.41 kcal/mol@LB@Hybridization Energy -23.7931 kcal/mol@LB@Unfolding Energy - mRNA 4.23572 kcal/mol@LB@Unfolding Energy - sRNA 9.57505 kcal/mol@LB@@LB@Position - mRNA 62 -- 87@LB@Position - sRNA 160 -- 186@LB@Position Seed - mRNA 65 -- 71@LB@Position Seed - sRNA 177 -- 183@LB@ |
106 |
0.02722 |
0.6733 |
lmo1616 |
N/A |
-15.61 |
0.075454 |
67 -- 108 |
167 -- 211 |
|
|
_____________66______________________109\n_____________|_______________________|\n5'-AAG...AUAAC_____U_____GACU________AGGGC...UUU-3'\n______________GAACA_AUGUU____UGACUAGU\n______________:||||_||||:____||||||||\n______________UUUGU_UACAG____ACUGAUCA\n3'-GUU...ACAGA_____C_________________ACGGU...GGA-5'\n_____________|_______________________|\n_____________212_____________________166\n |
90 -- 96 |
117 -- 123 |
-17.5219 kcal/mol |
5.32799 kcal/mol |
5.058 kcal/mol |
66 109@LB@ | |@LB@5'-AAG...AUAAC U GACU AGGGC...UUU-3'@LB@ GAACA AUGUU UGACUAGU@LB@ :|||| ||||: ||||||||@LB@ UUUGU UACAG ACUGAUCA@LB@3'-GUU...ACAGA C ACGGU...GGA-5'@LB@ | |@LB@ 212 166@LB@@LB@@LB@Energy -15.61 kcal/mol@LB@Hybridization Energy -17.5219 kcal/mol@LB@Unfolding Energy - mRNA 5.32799 kcal/mol@LB@Unfolding Energy - sRNA 5.058 kcal/mol@LB@@LB@Position - mRNA 67 -- 108@LB@Position - sRNA 167 -- 211@LB@Position Seed - mRNA 90 -- 96@LB@Position Seed - sRNA 117 -- 123@LB@ |
107 |
0.02737 |
0.6733 |
lmo1575 |
N/A |
-17.23 |
0.037041 |
80 -- 118 |
156 -- 205 |
|
|
_____________79______119\n_____________|_______|\n5'-GUA...UCACA_______C-3'\n______________AAUGGGG\n______________||:|||:\n______________UUGCCCU\n3'-GUU...ACGUA_______ACUCC...GGA-5'\n_____________|_______|\n_____________206_____155\n |
293 -- 299 |
201 -- 207 |
-8.20946 kcal/mol |
0.611387 kcal/mol |
0.326294 kcal/mol |
79 119@LB@ | |@LB@5'-GUA...UCACA C-3'@LB@ AAUGGGG@LB@ ||:|||:@LB@ UUGCCCU@LB@3'-GUU...ACGUA ACUCC...GGA-5'@LB@ | |@LB@ 206 155@LB@@LB@@LB@Energy -17.23 kcal/mol@LB@Hybridization Energy -8.20946 kcal/mol@LB@Unfolding Energy - mRNA 0.611387 kcal/mol@LB@Unfolding Energy - sRNA 0.326294 kcal/mol@LB@@LB@Position - mRNA 80 -- 118@LB@Position - sRNA 156 -- 205@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 201 -- 207@LB@ |
108 |
0.02743 |
0.6733 |
lmo2330 |
N/A |
-16.53 |
0.050546 |
195 -- 214 |
191 -- 207 |
|
|
_____________194_________215\n_____________|___________|\n5'-ACG...GAGAA___________CAAGU...UUU-3'\n______________AGCGGGAUGAG\n______________|:|||||||||\n______________UUGCCCUACUC\n3'-GUU...ACGUA___________CGUAU...GGA-5'\n_____________|___________|\n_____________208_________190\n |
199 -- 205 |
197 -- 203 |
-18.6004 kcal/mol |
2.16538 kcal/mol |
0.386761 kcal/mol |
194 215@LB@ | |@LB@5'-ACG...GAGAA CAAGU...UUU-3'@LB@ AGCGGGAUGAG@LB@ |:|||||||||@LB@ UUGCCCUACUC@LB@3'-GUU...ACGUA CGUAU...GGA-5'@LB@ | |@LB@ 208 190@LB@@LB@@LB@Energy -16.53 kcal/mol@LB@Hybridization Energy -18.6004 kcal/mol@LB@Unfolding Energy - mRNA 2.16538 kcal/mol@LB@Unfolding Energy - sRNA 0.386761 kcal/mol@LB@@LB@Position - mRNA 195 -- 214@LB@Position - sRNA 191 -- 207@LB@Position Seed - mRNA 199 -- 205@LB@Position Seed - sRNA 197 -- 203@LB@ |
109 |
0.02745 |
0.6733 |
lmo0843 |
N/A |
-19.30 |
0.014041 |
79 -- 127 |
106 -- 151 |
|
|
_____________78____________________________________________________128\n_____________|_____________________________________________________|\n5'-CCG...GUCCA____C_________________________AUAAUUU__U_____________CCCUG...CUG-3'\n______________AGUG_UUUUGGUG_CU_GAC_GAUGUUUGA_______CU__UUGCCAUUUUAU\n______________|:||_||||||||_||_:||_|||||:|||_______||__||||||||:|||\n______________UUAC_AAAACCAC_GA_UUG_CUACAGACU_______GA__AACGGUAAGAUA\n3'-GUU...GUUUA____U________A__U___U__________________UC____________ACCUU...GGA-5'\n_____________|_____________________________________________________|\n_____________152___________________________________________________105\n |
118 -- 124 |
109 -- 115 |
-38.6588 kcal/mol |
9.72702 kcal/mol |
18.7291 kcal/mol |
78 128@LB@ | |@LB@5'-CCG...GUCCA C AUAAUUU U CCCUG...CUG-3'@LB@ AGUG UUUUGGUG CU GAC GAUGUUUGA CU UUGCCAUUUUAU@LB@ |:|| |||||||| || :|| |||||:||| || ||||||||:|||@LB@ UUAC AAAACCAC GA UUG CUACAGACU GA AACGGUAAGAUA@LB@3'-GUU...GUUUA U A U U UC ACCUU...GGA-5'@LB@ | |@LB@ 152 105@LB@@LB@@LB@Energy -19.30 kcal/mol@LB@Hybridization Energy -38.6588 kcal/mol@LB@Unfolding Energy - mRNA 9.72702 kcal/mol@LB@Unfolding Energy - sRNA 18.7291 kcal/mol@LB@@LB@Position - mRNA 79 -- 127@LB@Position - sRNA 106 -- 151@LB@Position Seed - mRNA 118 -- 124@LB@Position Seed - sRNA 109 -- 115@LB@ |
110 |
0.02752 |
0.6733 |
lmo0057 |
N/A |
-17.32 |
0.035592 |
178 -- 213 |
150 -- 185 |
|
|
_____________177_________________214\n_____________|___________________|\n5'-AAA...GCGGG_______CA__________AAGUA...AAG-3'\n______________AGUGGGA__UGAAUGAAGA\n______________|:||:||__||||||||:|\n______________UUACUCU__ACUUACUUUU\n3'-GUU...GCCGG___________________GUUUA...GGA-5'\n_____________|___________________|\n_____________186_________________149\n |
201 -- 207 |
157 -- 163 |
-16.939 kcal/mol |
2.5385 kcal/mol |
0.930085 kcal/mol |
177 214@LB@ | |@LB@5'-AAA...GCGGG CA AAGUA...AAG-3'@LB@ AGUGGGA UGAAUGAAGA@LB@ |:||:|| ||||||||:|@LB@ UUACUCU ACUUACUUUU@LB@3'-GUU...GCCGG GUUUA...GGA-5'@LB@ | |@LB@ 186 149@LB@@LB@@LB@Energy -17.32 kcal/mol@LB@Hybridization Energy -16.939 kcal/mol@LB@Unfolding Energy - mRNA 2.5385 kcal/mol@LB@Unfolding Energy - sRNA 0.930085 kcal/mol@LB@@LB@Position - mRNA 178 -- 213@LB@Position - sRNA 150 -- 185@LB@Position Seed - mRNA 201 -- 207@LB@Position Seed - sRNA 157 -- 163@LB@ |