STM4014 |
56 |
73 |
63 |
69 |
5.12 |
GcvB |
36 |
58 |
40 |
46 |
5.66 |
-15.86 |
-26.64 |
-1.53772 |
GCCCCCAUCAGAGCAAGC&GCGUGUUCUGAUGGGCUUUUGGC |
(((((((((((((((.((&)).)))))))))))).....))) |
GAAGCUCUGGAGCCUGAUGAUUACGAUGGCGAUAUUUAUAUGAAUGCGAUGUACACCGAGUGAUUGAGUAGGGGAAUGUGCACAUUCCCCUACUCAACGAUAAAGGGAUUUAUUGUGAUUACGCUCAUUGGCCCCCAUCAGAGCAAGCGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0054675 |
0.7419678 |
|
1255540 |
putative periplasmic protein |
STM1856 |
-40 |
-18 |
-39 |
-33 |
1.92 |
GcvB |
64 |
87 |
80 |
86 |
7.14 |
-17.01 |
-26.07 |
-1.64922 |
AACACAACAUAUAACAUUAUAAC&GUUGUGAUGUUGUGUUGUUGUGUU |
(((((((((((((((((((((((&))))))))))))))).)))))))) |
AUAUCUGUAUGGCUGCUUUUAAGCAACAAUACUCUAACACAACAUAUAACAUUAUAACUUACAAUAGGUUAACAAAUGGAAUUACAGCUUAUGCUUAACCACUUUUUCGAGCGCGUCAGAAAGGAUGCAAAUUUCAACGCAUUUCUAAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0024848 |
0.659913 |
|
1253375 |
similar to E. coli orf hypothetical protein (AAC74245.1) Blastp hit to AAC74245.1 (134 aa) 40% identity in aa 1 - 127 |
STM3257 |
-68 |
-44 |
-63 |
-57 |
1.65 |
GcvB |
46 |
81 |
70 |
76 |
9.96 |
-13.98 |
-25.59 |
-1.35545 |
ACAAAACAACAUUACGAAAGCCUAU&AUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
((((.((((((((((((((((((((&))))))))...........)))))))))))).)))) |
CAAAAUCACAAAACAACAUUACGAAAGCCUAUAAAUUCUUUCGAAGAAGAAAAACGAAAGAACUCGGAGAUAAAAGUGAAAGAAAUAAUUGCUCGUCAUAAAGCAGGAGAACAUCUGGGCAUCUGUUCAGUUUGUUCUGCUCAUCCCCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0175423 |
0.8300455 |
|
1254780 |
D-tagatose-16-bisphosphate aldolase subunit GatZ |
STM3574 |
-53 |
-35 |
-43 |
-37 |
7.7 |
GcvB |
150 |
169 |
152 |
158 |
2.39 |
-15.48 |
-25.57 |
-1.50088 |
CACUAUAACGGGCAGGGUA&UACCCUGUCUGUCCAUAGUG |
((((((.((((((((((((&))))))))))))..)))))) |
GGCCGUGACGGUCAGAUGACAACACUAUAACGGGCAGGGUAUGCUUAUUUCCGCAUUUUCUGACAGGUUAACAGUAUGAGUAAGCCACCGCUUUUCUUCAUUAUAAUCAUUGCAUUAAUCGUAGUUGCCGCGUCGUUCCGCUUCGUUCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0070016 |
0.7528387 |
yhhM |
1255097 |
similar to E. coli putative receptor (AAC76492.1) Blastp hit to AAC76492.1 (119 aa) 84% identity in aa 1 - 116 |
STM3083 |
-36 |
-6 |
-13 |
-7 |
4.19 |
GcvB |
130 |
160 |
131 |
137 |
6.26 |
-15.04 |
-25.49 |
-1.45822 |
CAGAAUUGGUAAACAAAACAGGAGUGGGAAA&UUUUUCACUUCCUGUACAUUUACCCUGUCUG |
((((...((((((....((((((((((((((&)))))))).))))))...))))))...)))) |
AGUGUGAUCAUAUUCACGGAUUUUGGUAUGGUGUUUAAGCAGAAUUGGUAAACAAAACAGGAGUGGGAAAAAUUCAUGGACACCAUAGCUCGCCAGUUAGACGCCGCAAGGCACCAAUUCAAAACGACUUAUUCACGUCAGGGAAUGGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.009252 |
0.7883581 |
|
1254606 |
fructuronate reductase |
STM4228 |
-39 |
-26 |
-33 |
-27 |
7 |
GcvB |
1 |
15 |
2 |
8 |
4.12 |
-14.12 |
-25.24 |
-1.36902 |
UCCGGCCAGGAAGU&ACUUCCUGAGCCGGA |
((((((((((((((&)))))))).)))))) |
CGUAGGCCUGAUAAGCGCAGCGCCAUCAGGCACAUCUCCGGCCAGGAAGUUUCAACGCUGUAGAGGAAAACCCCCAUGGAUGUCAUUAAAAAGAAACACUGGUGGCAAAGCGACCAGCUUAAAUGGUCAGUAAUUGGUCUGCUGGGCCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0161607 |
0.7979576 |
malF |
1255754 |
maltose ABC transporter permease MalF |
STM0069 |
-71 |
-52 |
-71 |
-65 |
3.48 |
GcvB |
60 |
81 |
75 |
81 |
6.88 |
-14.87 |
-25.23 |
-1.44174 |
ACAGCACAUGCGCAACCGUA&UACGGUUGUGAUGUUGUGUUGU |
((((((((..((((((((((&))))))))))....)))))))) |
GCCUACAGCACAUGCGCAACCGUAGACCGGAUAAGGUGUUUACGCCGCCAUCCGGCAAAAAACCGAGGUACAACUAUGAGCUAUUACGCCUUUGAAGGACUGAUCCCGGUGGUGCAUCCGGACGCGUUUGUCCACCCCAGCGCCGUGCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0102821 |
0.7883581 |
caiE |
1251587 |
phenylacetic acid degradation protein PaaY |
STM3523 |
7 |
24 |
10 |
16 |
5.8 |
GcvB |
72 |
89 |
80 |
86 |
4.11 |
-15.15 |
-25.06 |
-1.46889 |
CAAACACAACGGCAUGAC&GUUGUGUUGUUGUGUUUG |
((((((((((((((((((&)))))))))))))))))) |
UCGAGAUAUUUUUCCAGGCCGGGUAGGGCGAAUGCCGCUAUCCGGCGCAAGGUUGGUUACUUUCAGAGAUUAUUCAUGAAACAAACACAACGGCAUGACGCGAUCAUUGAACUGGUAAAAAAACAGGGGUACGUCAGUACGGAAGAGCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0086358 |
0.7799855 |
glpR |
1255046 |
DeoR/GlpR family transcriptional regulator |
STM3598 |
58 |
75 |
64 |
70 |
4.01 |
GcvB |
62 |
79 |
67 |
73 |
5.83 |
-15.15 |
-24.99 |
-1.46889 |
AGCACAACGUCACUACCG&CGGUUGUGAUGUUGUGUU |
(((((((((((((.((((&)))).))))))))))))) |
AAAUGGUUCUGGCCUGAUUGUUAUUCAUGUUUUUAUAGCACACGCCACUUAUUAUUUUUAAUUCAGAGGAAGAAAAUGAAAAUUAGAGUUUUCAUGGCCACCGUGUUGCUGCUCAUCAGCCACUGUGUAUUUAGCACAACGUCACUACCG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0086358 |
0.7799855 |
|
1255121 |
putative L-asparaginase |
STM1571 |
-69 |
-46 |
-53 |
-47 |
3 |
GcvB |
65 |
89 |
66 |
72 |
6.66 |
-15.24 |
-24.9 |
-1.47761 |
CAGUCACAAAGCAUGACAUCACAA&UUGUGAUGUUGUGUUGUUGUGUUUG |
((..((((((((((((((((((((&))))))))))))))).)))))..)) |
UCAGGACAGUCACAAAGCAUGACAUCACAAAAAGCAACGCUAAUAGGGCUUGUUGCCAUCGUUCUGUGGAGCACGAUGGUUGGGUUAAUUCGCGGCGUCAGCGAAGGUCUCGGACCGGUAGGCGGCGCAGCCAUGAUCUAUUCAUUAAGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0081593 |
0.7799855 |
yddG |
1253089 |
putative permease |