STM0022 |
-74 |
-55 |
-63 |
-57 |
2.39 |
GcvB |
127 |
147 |
129 |
135 |
5.89 |
-14.36 |
-22.64 |
-1.39229 |
UGUUGGGAGGCGAGAAAGGG&CCCUUUUUCACUUCCUGUACA |
(((..(((((.(((((((((&))))))))).)))))...))) |
CUGUUGGGAGGCGAGAAAGGGGCGUUACGCGCGUCACUGCGCGUAACAAACCGACGGCAUCAGGAUAUUACGCAGAUGAAAAAAAACGUACCGAUUUUCCUUCGAUUAUUGCUACUGCUGUCGGCGGCCGGCCUGUCGUUUGCCGCGCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0140165 |
0.7904009 |
bcfB |
1251540 |
fimbrial chaperone protein |
STM0069 |
-71 |
-52 |
-71 |
-65 |
3.48 |
GcvB |
60 |
81 |
75 |
81 |
6.88 |
-14.87 |
-25.23 |
-1.44174 |
ACAGCACAUGCGCAACCGUA&UACGGUUGUGAUGUUGUGUUGU |
((((((((..((((((((((&))))))))))....)))))))) |
GCCUACAGCACAUGCGCAACCGUAGACCGGAUAAGGUGUUUACGCCGCCAUCCGGCAAAAAACCGAGGUACAACUAUGAGCUAUUACGCCUUUGAAGGACUGAUCCCGGUGGUGCAUCCGGACGCGUUUGUCCACCCCAGCGCCGUGCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0102821 |
0.7883581 |
caiE |
1251587 |
phenylacetic acid degradation protein PaaY |
STM2793 |
-73 |
-48 |
-63 |
-57 |
4.05 |
GcvB |
49 |
72 |
56 |
62 |
8.51 |
-14.28 |
-26.84 |
-1.38453 |
CGUUUCGAUUGUAGGCCGAAUAAGCC&GGCUUUUGGCUUACGGUUGUGAUG |
(((..(((((((((((((((..((((&)))))))))))))))))))..))) |
ACCGUUUCGAUUGUAGGCCGAAUAAGCCAGGCGCCAUCCGGUAAACGAGCGCAAUAACAAUAAAGAGGUUUUAGGAUGGGGCAAUUGUCAGAAUCACAUGCAUUAGGGGGCGGGCUGAAAUCACGCCACGUCACCAUGUUAUCGAUCGCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0147012 |
0.7904009 |
gabP |
1254316 |
GABA permease |
STM3600 |
-75 |
-47 |
-55 |
-49 |
1.65 |
GcvB |
155 |
182 |
157 |
163 |
6.06 |
-15.65 |
-23.36 |
-1.51736 |
GUGGAAUAUUAAUUACAUCAGGAUGGAUA&UGUCUGUCCAUAGUGAUUAAUGUAGCAC |
(((..(((((((((((....(((((((((&)))))))))...)))))))))))..))) |
GUGGAAUAUUAAUUACAUCAGGAUGGAUAAAAAAGCAGGGACGCUUUUUAUUGUAAAGACAAACAAGGAAUAAUGAUGAGCAUCAGCGUAUUGGGUAUUGGCGACAACGUUGUCGAUAAAUACCUGCAUUCCGGCAUCAUGUACCCCGGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0062731 |
0.7419678 |
|
1255123 |
fructoselysine 6-kinase |
STM3527 |
-66 |
-47 |
-54 |
-48 |
2.5 |
GcvB |
139 |
163 |
140 |
146 |
4.45 |
-14.85 |
-21.8 |
-1.4398 |
GGACAACAGUUGGUGCAGGA&UCCUGUACAUUUACCCUGUCUGUCC |
(((((((((...((((((((&)))))))).......)))).))))) |
AGCCCGCAGGGACAACAGUUGGUGCAGGAUGUGGGAUAUGUGCCGCUGUAUCCGGCCGCGAAAUAAAGGGACUAAAUGGAAGAGGUUAAAUUAUAUGUGGAACGGGUUGGCAUAGACCCGGCCAGCGGCGCUGAUAUUCGUAUUGCACGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0104098 |
0.7883581 |
|
1255050 |
similar to E. coli orf hypothetical protein (AAC73602.1) Blastp hit to AAC73602.1 (86 aa) 35% identity in aa 21 - 85 |
STM1571 |
-69 |
-46 |
-53 |
-47 |
3 |
GcvB |
65 |
89 |
66 |
72 |
6.66 |
-15.24 |
-24.9 |
-1.47761 |
CAGUCACAAAGCAUGACAUCACAA&UUGUGAUGUUGUGUUGUUGUGUUUG |
((..((((((((((((((((((((&))))))))))))))).)))))..)) |
UCAGGACAGUCACAAAGCAUGACAUCACAAAAAGCAACGCUAAUAGGGCUUGUUGCCAUCGUUCUGUGGAGCACGAUGGUUGGGUUAAUUCGCGGCGUCAGCGAAGGUCUCGGACCGGUAGGCGGCGCAGCCAUGAUCUAUUCAUUAAGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0081593 |
0.7799855 |
yddG |
1253089 |
putative permease |
STM1524 |
-72 |
-45 |
-52 |
-46 |
2.44 |
GcvB |
148 |
177 |
149 |
155 |
4.5 |
-15.64 |
-22.58 |
-1.51639 |
AUAUUAUUCAUUUUUCAGAAAGGGUAAA&UUUACCCUGUCUGUCCAUAGUGAUUAAUGU |
((((((.(((((...((((.((((((((&)))))))).)))).....))))).)))))) |
UUAAUAUUAUUCAUUUUUCAGAAAGGGUAAAGGGCGUCAUGAUGGUACAACUCCCCUGAUAACGAGAGAAAGAACAUGACCAUGAUGACUGCAACACAGGCGUUAUCCGUGAAUCCUGCGACCGGCCAGACGCUGGCGGCAAUGCCCUGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.006314 |
0.7419678 |
yneI |
1253042 |
putative succinate-semialdehyde dehydrogenase |
STM3257 |
-68 |
-44 |
-63 |
-57 |
1.65 |
GcvB |
46 |
81 |
70 |
76 |
9.96 |
-13.98 |
-25.59 |
-1.35545 |
ACAAAACAACAUUACGAAAGCCUAU&AUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
((((.((((((((((((((((((((&))))))))...........)))))))))))).)))) |
CAAAAUCACAAAACAACAUUACGAAAGCCUAUAAAUUCUUUCGAAGAAGAAAAACGAAAGAACUCGGAGAUAAAAGUGAAAGAAAUAAUUGCUCGUCAUAAAGCAGGAGAACAUCUGGGCAUCUGUUCAGUUUGUUCUGCUCAUCCCCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0175423 |
0.8300455 |
|
1254780 |
D-tagatose-16-bisphosphate aldolase subunit GatZ |
STM1715 |
-75 |
-43 |
-52 |
-46 |
2.7 |
GcvB |
42 |
71 |
45 |
51 |
9.85 |
-16.36 |
-28.91 |
-1.5862 |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGA&UCUGAUGGGCUUUUGGCUUACGGUUGUGAU |
((((.....(((((((.......((((((((((&))))))))))......)))))))...)))) |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGAAGUGCUCAGCGUAGACUAAUCUCCUUGUUUAAGGAGUAAAAAAUGCAUAAAGAGACGCAACCUAUCGAUCGCGAAACACUGUUGCUUGAAGCCAACAAAAUUAUUCGGGAACAUGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0039103 |
0.6975035 |
yciN |
1253234 |
similar to E. coli orf hypothetical protein (AAC74355.1) Blastp hit to AAC74355.1 (83 aa) 92% identity in aa 1 - 83 |
STM3093 |
-66 |
-41 |
-47 |
-41 |
4.25 |
GcvB |
72 |
101 |
72 |
78 |
11.77 |
-15.59 |
-31.61 |
-1.51155 |
GCGGACUGAUUGCAUACAGACACAAC&GUUGUGUUGUUGUGUUUGCAAUUGGUCUGC |
((((((((((((((((((.(((((((&)))))))...)))))..))))))))))))) |
CUUUCCUGAGCGGACUGAUUGCAUACAGACACAACUUUCGUUACGUUGCGGGCUCGUUUUGCUAUGGAGUGUGCAAUGUACCGUAAUUUUUCUUUUGCCGCUGCGUUGCUGGCCGCAGCGUUUUCAGGCCAGGCCCUGGCCGAUGGCAUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.006522 |
0.7419678 |
endA |
1254616 |
deoxyribonuclease I |