STM1879 |
-34 |
15 |
6 |
12 |
6.01 |
GcvB |
49 |
86 |
52 |
58 |
10.91 |
-14.44 |
-31.36 |
-1.40005 |
AUAUAACAAAUAUUAACGCAAAAGAAAAAACGACAUGUUGCCAAAAGCC&GGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGU |
((((((((.......((((((........(((((..((.((((((((((&))))))))))..)).)))))....)))))))))))))) |
ACCGGGACUACCAUGCUACGCCGCUGUGUUUGCCGCGUGAUAUAUAACAAAUAUUAACGCAAAAGAAAAAACGACAUGUUGCCAAAAGCCAAUCGAAUUCCCUAUGCCAUGACCGUACAUGGCGAUACGCGCAUUGAUAAUUAUUACUGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0133605 |
0.7904009 |
ptrB |
1253400 |
oligopeptidase B |
STM0001 |
-71 |
-15 |
-35 |
-29 |
4 |
GcvB |
141 |
186 |
155 |
161 |
8.64 |
-18.71 |
-31.35 |
-1.81405 |
GGCGGGCAGAUACUUUAACCAAUAUAGGAAUACAAGACAGACAAAUAAAAAUGACAG&CUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCC |
(((((((...(((.((((.((.(((.((........(((((((......((((((((&)))).)))).....)))))))))))).)).)))).))))).))))) |
CUUAGGCGGGCAGAUACUUUAACCAAUAUAGGAAUACAAGACAGACAAAUAAAAAUGACAGAGUACACAACAUCCAUGAACCGCAUCAGCACCACCACCAUUACCACCAUCACCAUUACCACAGGUAACGGUGCGGGCUGACGCGUACAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0006816 |
0.3847632 |
thrL |
1251519 |
thr operon leader peptide |
STM3076 |
-22 |
13 |
-22 |
-16 |
5.91 |
GcvB |
35 |
75 |
69 |
75 |
10.97 |
-14.34 |
-31.22 |
-1.39035 |
CAACAUCCGAUCUGGAGUCAAAAUGUCCUCACGUA&UGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUG |
((((((((((((...((((((((.((((.((((((&)))))).......))))))))))))...))))).))))))) |
UUCCGGCGUAGCCCAAAACGCGCUGUCGUCAAGUCGUUACGGGCAUGGCCUUUCAACAUCCGAUCUGGAGUCAAAAUGUCCUCACGUAAAGAGCUUGCCAAUGCUAUUCGUGCGCUGAGCAUGGACGCAGUACAGAAAGCCAAGUCCGGU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0141849 |
0.7904009 |
tktA |
1254599 |
transketolase |
STM1098 |
-69 |
-36 |
-51 |
-45 |
4.7 |
GcvB |
62 |
90 |
69 |
75 |
8.25 |
-18.25 |
-31.2 |
-1.76945 |
GCAUUUGCACAAUAACGACGACAUCAAUCAACUG&CGGUUGUGAUGUUGUGUUGUUGUGUUUGC |
(((....(((((((((.(((((((((..((((((&))))))))))))))))))))))))..))) |
GGUUUCGCAUUUGCACAAUAACGACGACAUCAAUCAACUGGAUAAGCUGCUGAAAUAACGCGGCAGGAGGUUCUCAUGCAAGUAGAUGAACAACGUCUGCGUUUUCGCGAUGCGAUGGCAAGUCUGGCGGCAGCGGUCAACAUCGUAACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0009836 |
0.4343002 |
hpaC |
1252616 |
4-hydroxyphenylacetate 3-monooxygenase reductase component |
STM0412 |
27 |
72 |
27 |
33 |
5.33 |
GcvB |
35 |
73 |
67 |
73 |
10.95 |
-14.92 |
-31.2 |
-1.44659 |
ACAUUACUUCCGGCGAUGCCACCAGCCUAAAAACAGACCUGUCGCA&UGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGU |
(((((((..((......((((..((((((....((((.....((((&))))...)))).))))))..))))....))..))))))) |
GUCGUGGGUUACAACUUCUAAACCUGCAAAAAAGGCCAGAGGUCGUCCUCUGGCCCGUUUCGGGCGCAUGCUGCCAUGCGGCGGCGAGUCGCGCCCACUUCACAUUACUUCCGGCGAUGCCACCAGCCUAAAAACAGACCUGUCGCAAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.009969 |
0.7883581 |
|
2673775 |
putative inner membrane protein |
STM4398 |
-30 |
6 |
-22 |
-16 |
2.15 |
GcvB |
125 |
169 |
153 |
159 |
9.4 |
-19.27 |
-30.82 |
-1.86835 |
CACAACACAGACAGGUACAGGAAGAAAAACAUGGUA&UACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUG |
(((...(((((((((((((((((((((((...((((&)))).))))))..)))))))).......))))))))).....))) |
UGAUAACAGGAUCGUCGUAUCAUAGACCAAAGGCCGUAGAGCCCGCACAACACAGACAGGUACAGGAAGAAAAACAUGGUAGAUCAGGUAAAAGUCGCAGCCGACGAACAGGCUCCGGCUGAACAGUCGCUACGGCGCAAUCUUACAAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.000428 |
0.3847632 |
cycA |
1255924 |
D-serine/D-alanine/glycine transporter |
STM1538 |
-52 |
-14 |
-43 |
-37 |
3.31 |
GcvB |
51 |
90 |
75 |
81 |
10.1 |
-16.93 |
-30.34 |
-1.64147 |
GCAAUAAAAACAACACGUCAUCAGAAAACGCUCCGGAAG&CUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGC |
((((....((((((((..(((((.((..((..(((((((&)))))))....)).)).)))))..))))))))....)))) |
GGUGAGCGCCAUAAAACAUGCCCGCAAUAAAAACAACACGUCAUCAGAAAACGCUCCGGAAGAGAAAAAAUAAUUAUGGCAUAUCCUUAUCAGACUCAGGGUUUUACGCUGGACAAUAGCGGACGGCGAAUUGUGGUCGAUCCGGUUACU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0026303 |
0.659913 |
|
1253056 |
putative hydrogenase-1 large subunit |
STM3909 |
-34 |
-14 |
-24 |
-18 |
1.56 |
GcvB |
67 |
88 |
71 |
77 |
6.32 |
-21.24 |
-29.12 |
-2.05935 |
AAGCGCGACACACAACAUCAC&GUGAUGUUGUGUUGUUGUGUUU |
(((((((((((((((((((((&))))))))))).)))))))))) |
UGGGUUCAUUCGCACAGAUAGCAAUCUGUAAACCGAACAAUAAGCGCGACACACAACAUCACGGAGUACACCAUCAUGGCUAACUACUUUAAUACACUGAAUCUGCGCCAGCAGCUGGCGCAGUUGGGUAAAUGCCGCUUUAUGGGCCGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
6.85e-05 |
0.2036716 |
ilvC |
1255435 |
ketol-acid reductoisomerase |
STM1179 |
22 |
44 |
38 |
44 |
7.1 |
GcvB |
35 |
58 |
35 |
41 |
5.79 |
-16.06 |
-28.95 |
-1.55712 |
GCCAAAACCGGUCUGGACGCGCA&UGCGUGUUCUGAUGGGCUUUUGGC |
(((((((((..((.(((((((((&))))))))).))..)).))))))) |
AGGUUAUCACCAGCGUAGAUGAGAACGAAGGGCGAGCUAACCAACUGCUGUCGAUGAGUUAAUACAGGACAUUUUAUGAUCAGUUCAUUAUGGAUCGCCAAAACCGGUCUGGACGCGCAGCAAACCAAUAUGGAUGUGAUUGCCAAUAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.004788 |
0.6975035 |
flgG |
1252697 |
flagellar basal-body rod protein FlgG |
STM1715 |
-75 |
-43 |
-52 |
-46 |
2.7 |
GcvB |
42 |
71 |
45 |
51 |
9.85 |
-16.36 |
-28.91 |
-1.5862 |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGA&UCUGAUGGGCUUUUGGCUUACGGUUGUGAU |
((((.....(((((((.......((((((((((&))))))))))......)))))))...)))) |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGAAGUGCUCAGCGUAGACUAAUCUCCUUGUUUAAGGAGUAAAAAAUGCAUAAAGAGACGCAACCUAUCGAUCGCGAAACACUGUUGCUUGAAGCCAACAAAAUUAUUCGGGAACAUGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0039103 |
0.6975035 |
yciN |
1253234 |
similar to E. coli orf hypothetical protein (AAC74355.1) Blastp hit to AAC74355.1 (83 aa) 92% identity in aa 1 - 83 |