| 136 |
0.005087 |
0.1318 |
b3057 |
bacA |
-11.47 |
0.047548 |
153 -- 174 |
49 -- 71 |
undecaprenyl pyrophosphate phosphatase |
|
_____________152_____________________175\n_____________|_______________________|\n5'-UUC...CAUAC_____________C___C_____CAUUU...UUG-3'\n______________GCAGUAGUUCGGA_AAG__GGUA\n______________||||||:|||::|_|||__:|||\n______________CGUCAUUAAGUUU_UUC__UCAU\n3'-UUU...CGAUA_____________U___CU____UCUGU...ACG-5'\n_____________|_______________________|\n_____________72______________________48\n |
156 -- 162 |
62 -- 68 |
-21.4579 kcal/mol |
5.97 kcal/mol |
4.02052 kcal/mol |
152 175@LB@ | |@LB@5'-UUC...CAUAC C C CAUUU...UUG-3'@LB@ GCAGUAGUUCGGA AAG GGUA@LB@ ||||||:|||::| ||| :|||@LB@ CGUCAUUAAGUUU UUC UCAU@LB@3'-UUU...CGAUA U CU UCUGU...ACG-5'@LB@ | |@LB@ 72 48@LB@@LB@@LB@Energy -11.47 kcal/mol@LB@Hybridization Energy -21.4579 kcal/mol@LB@Unfolding Energy - mRNA 5.97 kcal/mol@LB@Unfolding Energy - sRNA 4.02052 kcal/mol@LB@@LB@Position - mRNA 153 -- 174@LB@Position - sRNA 49 -- 71@LB@Position Seed - mRNA 156 -- 162@LB@Position Seed - sRNA 62 -- 68@LB@ |
| 9 |
1.504e-05 |
0.005627 |
b1189 |
dadA |
-11.44 |
0.048458 |
195 -- 226 |
48 -- 78 |
D-amino acid dehydrogenase |
|
_____________194_______________________________227\n_____________|_________________________________|\n5'-CCG...UCGGA__G_______G___UG____UACU_________UGUGG...CGG-3'\n______________GU_GCUAUGC_AGU___UCA____GGGAAGUGG\n______________||_|||||||_|||___|||____:||||||::\n______________CA_CGAUACG_UCA___AGU____UCCUUCAUU\n3'-UUU...GUUAA______________UUA___UUUU_________CUGUU...ACG-5'\n_____________|_________________________________|\n_____________79________________________________47\n |
220 -- 226 |
48 -- 54 |
-26.7579 kcal/mol |
10.7545 kcal/mol |
4.57065 kcal/mol |
194 227@LB@ | |@LB@5'-CCG...UCGGA G G UG UACU UGUGG...CGG-3'@LB@ GU GCUAUGC AGU UCA GGGAAGUGG@LB@ || ||||||| ||| ||| :||||||::@LB@ CA CGAUACG UCA AGU UCCUUCAUU@LB@3'-UUU...GUUAA UUA UUUU CUGUU...ACG-5'@LB@ | |@LB@ 79 47@LB@@LB@@LB@Energy -11.44 kcal/mol@LB@Hybridization Energy -26.7579 kcal/mol@LB@Unfolding Energy - mRNA 10.7545 kcal/mol@LB@Unfolding Energy - sRNA 4.57065 kcal/mol@LB@@LB@Position - mRNA 195 -- 226@LB@Position - sRNA 48 -- 78@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 52 |
0.0006076 |
0.04117 |
b1119 |
nagK |
-11.33 |
0.051615 |
175 -- 204 |
40 -- 71 |
N-acetyl-D-glucosamine kinase |
|
_____________174_______________________________205\n_____________|_________________________________|\n5'-UCA...UAAAG______CA______C______C___________AUUAC...GUG-3'\n______________GCAGUA__UUAAAA_AAGGAG____GGCAAUGU\n______________||||||__|:||||_|||||:____|:||||:|\n______________CGUCAU__AGUUUU_UUCCUU____CUGUUAUA\n3'-UUU...CGAUA______UA_____________CAUU________CCUCG...ACG-5'\n_____________|_________________________________|\n_____________72________________________________39\n |
197 -- 203 |
41 -- 47 |
-22.8361 kcal/mol |
5.88825 kcal/mol |
5.61718 kcal/mol |
174 205@LB@ | |@LB@5'-UCA...UAAAG CA C C AUUAC...GUG-3'@LB@ GCAGUA UUAAAA AAGGAG GGCAAUGU@LB@ |||||| |:|||| |||||: |:||||:|@LB@ CGUCAU AGUUUU UUCCUU CUGUUAUA@LB@3'-UUU...CGAUA UA CAUU CCUCG...ACG-5'@LB@ | |@LB@ 72 39@LB@@LB@@LB@Energy -11.33 kcal/mol@LB@Hybridization Energy -22.8361 kcal/mol@LB@Unfolding Energy - mRNA 5.88825 kcal/mol@LB@Unfolding Energy - sRNA 5.61718 kcal/mol@LB@@LB@Position - mRNA 175 -- 204@LB@Position - sRNA 40 -- 71@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 110 |
0.003505 |
0.1114 |
b4111 |
proP |
-11.30 |
0.052648 |
186 -- 222 |
48 -- 93 |
proline/glycine betaine transporter |
|
_____________185________________________________________________223\n_____________|__________________________________________________|\n5'-CAC...CCAAC_________GA_____________U________________AAAA_____AACCG...GUA-3'\n______________UC_UGCGAG__AA____GCUAUGC_________GAAAAGGA____AGUAA\n______________||_|:|||:__||____|||||||_________:|||||||____|||||\n______________AG_AUGCUU__UU____CGAUACG_________UUUUUCCU____UCAUU\n3'-UUU...GCCGC__C______AG__AACA_______UCAUUAAGU_________________CUGUU...ACG-5'\n_____________|__________________________________________________|\n_____________94_________________________________________________47\n |
198 -- 204 |
70 -- 76 |
-22.6159 kcal/mol |
6.45165 kcal/mol |
4.87071 kcal/mol |
185 223@LB@ | |@LB@5'-CAC...CCAAC GA U AAAA AACCG...GUA-3'@LB@ UC UGCGAG AA GCUAUGC GAAAAGGA AGUAA@LB@ || |:|||: || ||||||| :||||||| |||||@LB@ AG AUGCUU UU CGAUACG UUUUUCCU UCAUU@LB@3'-UUU...GCCGC C AG AACA UCAUUAAGU CUGUU...ACG-5'@LB@ | |@LB@ 94 47@LB@@LB@@LB@Energy -11.30 kcal/mol@LB@Hybridization Energy -22.6159 kcal/mol@LB@Unfolding Energy - mRNA 6.45165 kcal/mol@LB@Unfolding Energy - sRNA 4.87071 kcal/mol@LB@@LB@Position - mRNA 186 -- 222@LB@Position - sRNA 48 -- 93@LB@Position Seed - mRNA 198 -- 204@LB@Position Seed - sRNA 70 -- 76@LB@ |
| 159 |
0.006259 |
0.1377 |
b2194 |
ccmH |
-11.29 |
0.052751 |
252 -- 296 |
43 -- 89 |
heme lyase CcmH subunit |
|
_____________251__________________________________________________297\n_____________|____________________________________________________|\n5'-CUG...CGCUG____CC_____________________________U_____CAC___A____CAGU-3'\n______________GCGA__AUCGA_UGUGUUG__CAGU___UUAAAGA__GAAG___AGG_ACAA\n______________:|||__|||:|_||||:|:__||||___|:|||:|__||||___|:|_||||\n______________UGCU__UAGUU_ACACGAU__GUCA___AGUUUUU__CUUC___UUC_UGUU\n3'-UUU...CAGCA___________A_______AC____UUA_______UC____A__________AUACC...ACG-5'\n_____________|____________________________________________________|\n_____________90___________________________________________________42\n |
263 -- 269 |
73 -- 79 |
-25.337 kcal/mol |
8.31324 kcal/mol |
5.7326 kcal/mol |
251 297@LB@ | |@LB@5'-CUG...CGCUG CC U CAC A CAGU-3'@LB@ GCGA AUCGA UGUGUUG CAGU UUAAAGA GAAG AGG ACAA@LB@ :||| |||:| ||||:|: |||| |:|||:| |||| |:| ||||@LB@ UGCU UAGUU ACACGAU GUCA AGUUUUU CUUC UUC UGUU@LB@3'-UUU...CAGCA A AC UUA UC A AUACC...ACG-5'@LB@ | |@LB@ 90 42@LB@@LB@@LB@Energy -11.29 kcal/mol@LB@Hybridization Energy -25.337 kcal/mol@LB@Unfolding Energy - mRNA 8.31324 kcal/mol@LB@Unfolding Energy - sRNA 5.7326 kcal/mol@LB@@LB@Position - mRNA 252 -- 296@LB@Position - sRNA 43 -- 89@LB@Position Seed - mRNA 263 -- 269@LB@Position Seed - sRNA 73 -- 79@LB@ |
| 94 |
0.002802 |
0.105 |
b2905 |
gcvT |
-11.27 |
0.053451 |
219 -- 244 |
68 -- 93 |
aminomethyltransferase tetrahydrofolate-dependent subunit (T protein) of glycine cleavage complex |
|
_____________218_________________________245\n_____________|___________________________|\n5'-CUG...CUCCU_____________CACAC___U_____CGCUC...AAA-3'\n______________UUGUACGAA_CAA_____GCU_UGCGG\n______________|:|||||||_|||_____|||_|||:|\n______________AGCAUGCUU_GUU_____CGA_ACGUC\n3'-UUU...GCCGC_________A___AACA____U_____AUUAA...ACG-5'\n_____________|___________________________|\n_____________94__________________________67\n |
221 -- 227 |
85 -- 91 |
-21.376 kcal/mol |
5.42013 kcal/mol |
4.68758 kcal/mol |
218 245@LB@ | |@LB@5'-CUG...CUCCU CACAC U CGCUC...AAA-3'@LB@ UUGUACGAA CAA GCU UGCGG@LB@ |:||||||| ||| ||| |||:|@LB@ AGCAUGCUU GUU CGA ACGUC@LB@3'-UUU...GCCGC A AACA U AUUAA...ACG-5'@LB@ | |@LB@ 94 67@LB@@LB@@LB@Energy -11.27 kcal/mol@LB@Hybridization Energy -21.376 kcal/mol@LB@Unfolding Energy - mRNA 5.42013 kcal/mol@LB@Unfolding Energy - sRNA 4.68758 kcal/mol@LB@@LB@Position - mRNA 219 -- 244@LB@Position - sRNA 68 -- 93@LB@Position Seed - mRNA 221 -- 227@LB@Position Seed - sRNA 85 -- 91@LB@ |
| 164 |
0.006461 |
0.1377 |
b0864 |
artP |
-11.21 |
0.055481 |
74 -- 84 |
70 -- 80 |
arginine ABC transporter ATPase |
|
_____________73__________85\n_____________|___________|\n5'-AAA...UUAUU___________UUAUU...UAC-3'\n______________UUGUGCUAUGU\n______________||||||||||:\n______________AACACGAUACG\n3'-UUU...UAGUU___________UCAUU...ACG-5'\n_____________|___________|\n_____________81__________69\n |
78 -- 84 |
70 -- 76 |
-15.8897 kcal/mol |
2.86206 kcal/mol |
1.81863 kcal/mol |
73 85@LB@ | |@LB@5'-AAA...UUAUU UUAUU...UAC-3'@LB@ UUGUGCUAUGU@LB@ ||||||||||:@LB@ AACACGAUACG@LB@3'-UUU...UAGUU UCAUU...ACG-5'@LB@ | |@LB@ 81 69@LB@@LB@@LB@Energy -11.21 kcal/mol@LB@Hybridization Energy -15.8897 kcal/mol@LB@Unfolding Energy - mRNA 2.86206 kcal/mol@LB@Unfolding Energy - sRNA 1.81863 kcal/mol@LB@@LB@Position - mRNA 74 -- 84@LB@Position - sRNA 70 -- 80@LB@Position Seed - mRNA 78 -- 84@LB@Position Seed - sRNA 70 -- 76@LB@ |
| 169 |
0.006778 |
0.1407 |
b3300 |
secY |
-11.17 |
0.056917 |
151 -- 190 |
56 -- 93 |
preprotein translocase membrane subunit |
|
_____________150_______________________________________191\n_____________|_________________________________________|\n5'-CCU...GGCGC______UGCU_____AGC_____________AA________UAAGU...UCC-3'\n______________UCGUGC____AUCGA___UGCUG_GCGGUAA__UCGAGGAA\n______________||||:|____|||:|___||||:_||:||||__||:|::||\n______________AGCAUG____UAGUU___ACGAU_CGUCAUU__AGUUUUUU\n3'-UUU...GCCGC______CU_______AAC_____A_______A_________CCUUC...ACG-5'\n_____________|_________________________________________|\n_____________94________________________________________55\n |
174 -- 180 |
65 -- 71 |
-28.5007 kcal/mol |
12.5083 kcal/mol |
4.83069 kcal/mol |
150 191@LB@ | |@LB@5'-CCU...GGCGC UGCU AGC AA UAAGU...UCC-3'@LB@ UCGUGC AUCGA UGCUG GCGGUAA UCGAGGAA@LB@ ||||:| |||:| ||||: ||:|||| ||:|::||@LB@ AGCAUG UAGUU ACGAU CGUCAUU AGUUUUUU@LB@3'-UUU...GCCGC CU AAC A A CCUUC...ACG-5'@LB@ | |@LB@ 94 55@LB@@LB@@LB@Energy -11.17 kcal/mol@LB@Hybridization Energy -28.5007 kcal/mol@LB@Unfolding Energy - mRNA 12.5083 kcal/mol@LB@Unfolding Energy - sRNA 4.83069 kcal/mol@LB@@LB@Position - mRNA 151 -- 190@LB@Position - sRNA 56 -- 93@LB@Position Seed - mRNA 174 -- 180@LB@Position Seed - sRNA 65 -- 71@LB@ |
| 184 |
0.008005 |
0.1528 |
b3209 |
elbB |
-11.15 |
0.057587 |
162 -- 192 |
53 -- 86 |
isoprenoid biosynthesis protein with amidotransferase-like domain |
|
_____________161_________________________________193\n_____________|___________________________________|\n5'-GCG...AAAAA_____________U______C____GC________UGAUC...GUG-3'\n______________AAUUAA_UGUGUU___CAGU_AAUU___GAAAGGA\n______________|||:||_||||:|___||||_||||___:||||||\n______________UUAGUU_ACACGA___GUCA_UUAA___UUUUCCU\n3'-UUU...CAUGC______A______UAC_________GUU_______UCAUU...ACG-5'\n_____________|___________________________________|\n_____________87__________________________________52\n |
186 -- 192 |
53 -- 59 |
-19.5143 kcal/mol |
4.60736 kcal/mol |
3.76074 kcal/mol |
161 193@LB@ | |@LB@5'-GCG...AAAAA U C GC UGAUC...GUG-3'@LB@ AAUUAA UGUGUU CAGU AAUU GAAAGGA@LB@ |||:|| ||||:| |||| |||| :||||||@LB@ UUAGUU ACACGA GUCA UUAA UUUUCCU@LB@3'-UUU...CAUGC A UAC GUU UCAUU...ACG-5'@LB@ | |@LB@ 87 52@LB@@LB@@LB@Energy -11.15 kcal/mol@LB@Hybridization Energy -19.5143 kcal/mol@LB@Unfolding Energy - mRNA 4.60736 kcal/mol@LB@Unfolding Energy - sRNA 3.76074 kcal/mol@LB@@LB@Position - mRNA 162 -- 192@LB@Position - sRNA 53 -- 86@LB@Position Seed - mRNA 186 -- 192@LB@Position Seed - sRNA 53 -- 59@LB@ |
| 111 |
0.003511 |
0.1114 |
b0077 |
ilvI |
-11.05 |
0.061087 |
188 -- 206 |
36 -- 52 |
acetolactate synthase 3 large subunit |
|
_____________187_________________207\n_____________|___________________|\n5'-AAA...CAAAC__________GCC______AUGUU...UUU-3'\n______________AGUGAGGCAG___AUGGAG\n______________|||:||:||:___||||||\n______________UCAUUCUGUU___UACCUC\n3'-UUU...UUCCU__________A________GCGUU...ACG-5'\n_____________|___________________|\n_____________53__________________35\n |
191 -- 197 |
43 -- 49 |
-19.2253 kcal/mol |
4.72052 kcal/mol |
3.43382 kcal/mol |
187 207@LB@ | |@LB@5'-AAA...CAAAC GCC AUGUU...UUU-3'@LB@ AGUGAGGCAG AUGGAG@LB@ |||:||:||: ||||||@LB@ UCAUUCUGUU UACCUC@LB@3'-UUU...UUCCU A GCGUU...ACG-5'@LB@ | |@LB@ 53 35@LB@@LB@@LB@Energy -11.05 kcal/mol@LB@Hybridization Energy -19.2253 kcal/mol@LB@Unfolding Energy - mRNA 4.72052 kcal/mol@LB@Unfolding Energy - sRNA 3.43382 kcal/mol@LB@@LB@Position - mRNA 188 -- 206@LB@Position - sRNA 36 -- 52@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 43 -- 49@LB@ |
