20 |
0.00399 |
0.5992 |
b4175 |
hflC |
-10.54 |
0.031960 |
184 -- 196 |
43 -- 56 |
HflB protease modulator specific for phage lambda cII repressor |
|
_____________183____________197\n_____________|______________|\n5'-UUA...ACCAG______________AACGA...GUU-3'\n______________CGUCAGGG_GGAAU\n______________|||||::|_|||||\n______________GCAGUUUC_CCUUA\n3'-UUU...ACCGG________U_____AAGUA...ACA-5'\n_____________|______________|\n_____________57_____________42\n |
185 -- 191 |
49 -- 55 |
-15.8123 kcal/mol |
4.32193 kcal/mol |
0.953958 kcal/mol |
183 197@LB@ | |@LB@5'-UUA...ACCAG AACGA...GUU-3'@LB@ CGUCAGGG GGAAU@LB@ |||||::| |||||@LB@ GCAGUUUC CCUUA@LB@3'-UUU...ACCGG U AAGUA...ACA-5'@LB@ | |@LB@ 57 42@LB@@LB@@LB@Energy -10.54 kcal/mol@LB@Hybridization Energy -15.8123 kcal/mol@LB@Unfolding Energy - mRNA 4.32193 kcal/mol@LB@Unfolding Energy - sRNA 0.953958 kcal/mol@LB@@LB@Position - mRNA 184 -- 196@LB@Position - sRNA 43 -- 56@LB@Position Seed - mRNA 185 -- 191@LB@Position Seed - sRNA 49 -- 55@LB@ |
26 |
0.004859 |
0.5992 |
b1753 |
ynjA |
-8.90 |
0.068656 |
186 -- 195 |
43 -- 52 |
carboxymuconolactone decarboxylase family protein |
|
_____________185________196\n_____________|__________|\n5'-ACU...CGCCA__________GCCUG...GGU-3'\n______________GAAGAGGAAU\n______________:|||||||||\n______________UUUCUCCUUA\n3'-UUU...GGCAG__________AAGUA...ACA-5'\n_____________|__________|\n_____________53_________42\n |
189 -- 195 |
43 -- 49 |
-11.6028 kcal/mol |
1.83308 kcal/mol |
0.865937 kcal/mol |
185 196@LB@ | |@LB@5'-ACU...CGCCA GCCUG...GGU-3'@LB@ GAAGAGGAAU@LB@ :|||||||||@LB@ UUUCUCCUUA@LB@3'-UUU...GGCAG AAGUA...ACA-5'@LB@ | |@LB@ 53 42@LB@@LB@@LB@Energy -8.90 kcal/mol@LB@Hybridization Energy -11.6028 kcal/mol@LB@Unfolding Energy - mRNA 1.83308 kcal/mol@LB@Unfolding Energy - sRNA 0.865937 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 43 -- 52@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 43 -- 49@LB@ |
44 |
0.008636 |
0.6129 |
b3317 |
rplB |
-9.78 |
0.045660 |
184 -- 194 |
43 -- 55 |
50S ribosomal subunit protein L2 |
|
_____________183___________195\n_____________|_____________|\n5'-GCA...AGUAA_____________AAUAC...UGC-3'\n______________GUC__GGAGGAGU\n______________|||__:|||||:|\n______________CAG__UCUCCUUA\n3'-UUU...CCGGG___UU________AAGUA...ACA-5'\n_____________|_____________|\n_____________56____________42\n |
188 -- 194 |
43 -- 49 |
-13.3143 kcal/mol |
2.58995 kcal/mol |
0.946481 kcal/mol |
183 195@LB@ | |@LB@5'-GCA...AGUAA AAUAC...UGC-3'@LB@ GUC GGAGGAGU@LB@ ||| :|||||:|@LB@ CAG UCUCCUUA@LB@3'-UUU...CCGGG UU AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -9.78 kcal/mol@LB@Hybridization Energy -13.3143 kcal/mol@LB@Unfolding Energy - mRNA 2.58995 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 184 -- 194@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 43 -- 49@LB@ |
59 |
0.01284 |
0.6177 |
b3453 |
ugpB |
-7.80 |
0.113752 |
247 -- 260 |
43 -- 56 |
sn-glycerol-3-phosphate ABC transporter periplasmic binding protein |
|
_____________246____________261\n_____________|______________|\n5'-UUC...ACUGG______U_______GCACA...UGG-3'\n______________CGUUAA_GGGGAAU\n______________|||:||_|:|||||\n______________GCAGUU_CUCCUUA\n3'-UUU...ACCGG______U_______AAGUA...ACA-5'\n_____________|______________|\n_____________57_____________42\n |
254 -- 260 |
43 -- 49 |
-14.4117 kcal/mol |
5.65325 kcal/mol |
0.953958 kcal/mol |
246 261@LB@ | |@LB@5'-UUC...ACUGG U GCACA...UGG-3'@LB@ CGUUAA GGGGAAU@LB@ |||:|| |:|||||@LB@ GCAGUU CUCCUUA@LB@3'-UUU...ACCGG U AAGUA...ACA-5'@LB@ | |@LB@ 57 42@LB@@LB@@LB@Energy -7.80 kcal/mol@LB@Hybridization Energy -14.4117 kcal/mol@LB@Unfolding Energy - mRNA 5.65325 kcal/mol@LB@Unfolding Energy - sRNA 0.953958 kcal/mol@LB@@LB@Position - mRNA 247 -- 260@LB@Position - sRNA 43 -- 56@LB@Position Seed - mRNA 254 -- 260@LB@Position Seed - sRNA 43 -- 49@LB@ |
89 |
0.01853 |
0.6177 |
b1448 |
mnaT |
-8.57 |
0.080000 |
123 -- 134 |
43 -- 54 |
methionine N-acyltransferase; L-amino acid N-acyltransferase |
|
_____________122__________135\n_____________|____________|\n5'-CGC...UAAUU___UC_______CCGUU...CGG-3'\n______________UCA__GAGGAAU\n______________|||__|||||||\n______________AGU__CUCCUUA\n3'-UUU...CGGGC___UU_______AAGUA...ACA-5'\n_____________|____________|\n_____________55___________42\n |
128 -- 134 |
43 -- 49 |
-11.9422 kcal/mol |
2.42412 kcal/mol |
0.944705 kcal/mol |
122 135@LB@ | |@LB@5'-CGC...UAAUU UC CCGUU...CGG-3'@LB@ UCA GAGGAAU@LB@ ||| |||||||@LB@ AGU CUCCUUA@LB@3'-UUU...CGGGC UU AAGUA...ACA-5'@LB@ | |@LB@ 55 42@LB@@LB@@LB@Energy -8.57 kcal/mol@LB@Hybridization Energy -11.9422 kcal/mol@LB@Unfolding Energy - mRNA 2.42412 kcal/mol@LB@Unfolding Energy - sRNA 0.944705 kcal/mol@LB@@LB@Position - mRNA 123 -- 134@LB@Position - sRNA 43 -- 54@LB@Position Seed - mRNA 128 -- 134@LB@Position Seed - sRNA 43 -- 49@LB@ |
93 |
0.01877 |
0.6177 |
b3492 |
yhiN |
-6.30 |
0.220558 |
150 -- 160 |
43 -- 53 |
putative oxidoreductase |
|
_____________149_________161\n_____________|___________|\n5'-CGG...GCGAC__CU_______CUUUA...AUA-3'\n______________CA__GAGGAAU\n______________||__|||||||\n______________GU__CUCCUUA\n3'-UUU...GGGCA__UU_______AAGUA...ACA-5'\n_____________|___________|\n_____________54__________42\n |
154 -- 160 |
43 -- 49 |
-10.7951 kcal/mol |
3.55798 kcal/mol |
0.933055 kcal/mol |
149 161@LB@ | |@LB@5'-CGG...GCGAC CU CUUUA...AUA-3'@LB@ CA GAGGAAU@LB@ || |||||||@LB@ GU CUCCUUA@LB@3'-UUU...GGGCA UU AAGUA...ACA-5'@LB@ | |@LB@ 54 42@LB@@LB@@LB@Energy -6.30 kcal/mol@LB@Hybridization Energy -10.7951 kcal/mol@LB@Unfolding Energy - mRNA 3.55798 kcal/mol@LB@Unfolding Energy - sRNA 0.933055 kcal/mol@LB@@LB@Position - mRNA 150 -- 160@LB@Position - sRNA 43 -- 53@LB@Position Seed - mRNA 154 -- 160@LB@Position Seed - sRNA 43 -- 49@LB@ |
119 |
0.02381 |
0.6177 |
b1434 |
ydcN |
-8.41 |
0.086264 |
87 -- 94 |
43 -- 50 |
putative DNA-binding transcriptional regulator |
|
_____________86_______95\n_____________|________|\n5'-CGG...UGGGU________AGAAA...CUA-3'\n______________GGAGGAAU\n______________:|||||||\n______________UCUCCUUA\n3'-UUU...CAGUU________AAGUA...ACA-5'\n_____________|________|\n_____________51_______42\n |
88 -- 94 |
43 -- 49 |
-10.2233 kcal/mol |
0.967994 kcal/mol |
0.845564 kcal/mol |
86 95@LB@ | |@LB@5'-CGG...UGGGU AGAAA...CUA-3'@LB@ GGAGGAAU@LB@ :|||||||@LB@ UCUCCUUA@LB@3'-UUU...CAGUU AAGUA...ACA-5'@LB@ | |@LB@ 51 42@LB@@LB@@LB@Energy -8.41 kcal/mol@LB@Hybridization Energy -10.2233 kcal/mol@LB@Unfolding Energy - mRNA 0.967994 kcal/mol@LB@Unfolding Energy - sRNA 0.845564 kcal/mol@LB@@LB@Position - mRNA 87 -- 94@LB@Position - sRNA 43 -- 50@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 43 -- 49@LB@ |
128 |
0.02532 |
0.6177 |
b3642 |
pyrE |
-8.06 |
0.101423 |
72 -- 92 |
43 -- 68 |
orotate phosphoribosyltransferase |
|
_____________71_________________________93\n_____________|__________________________|\n5'-CGG...CUUGU_G___C____________________CGAAU...AUU-3'\n______________U_GCU__UGGCCCG____AGGGGAAU\n______________|_|||__|||||||____||:|||||\n______________A_CGA__ACCGGGC____UCUCCUUA\n3'-UUU...GUUAU_G___UA_______AGUU________AAGUA...ACA-5'\n_____________|__________________________|\n_____________69_________________________42\n |
86 -- 92 |
43 -- 49 |
-26.5136 kcal/mol |
7.12642 kcal/mol |
11.3306 kcal/mol |
71 93@LB@ | |@LB@5'-CGG...CUUGU G C CGAAU...AUU-3'@LB@ U GCU UGGCCCG AGGGGAAU@LB@ | ||| ||||||| ||:|||||@LB@ A CGA ACCGGGC UCUCCUUA@LB@3'-UUU...GUUAU G UA AGUU AAGUA...ACA-5'@LB@ | |@LB@ 69 42@LB@@LB@@LB@Energy -8.06 kcal/mol@LB@Hybridization Energy -26.5136 kcal/mol@LB@Unfolding Energy - mRNA 7.12642 kcal/mol@LB@Unfolding Energy - sRNA 11.3306 kcal/mol@LB@@LB@Position - mRNA 72 -- 92@LB@Position - sRNA 43 -- 68@LB@Position Seed - mRNA 86 -- 92@LB@Position Seed - sRNA 43 -- 49@LB@ |
143 |
0.02773 |
0.6177 |
b0409 |
secF |
-7.84 |
0.111773 |
181 -- 195 |
43 -- 55 |
SecYEG protein translocase auxillary subunit |
|
_____________180_____________196\n_____________|_______________|\n5'-CUU...AAGCU_____UCU_______GCGAU...UGU-3'\n______________GUCAA___GAGGAGU\n______________|||||___|||||:|\n______________CAGUU___CUCCUUA\n3'-UUU...CCGGG_____U_________AAGUA...ACA-5'\n_____________|_______________|\n_____________56______________42\n |
189 -- 195 |
43 -- 49 |
-13.7308 kcal/mol |
4.94116 kcal/mol |
0.946481 kcal/mol |
180 196@LB@ | |@LB@5'-CUU...AAGCU UCU GCGAU...UGU-3'@LB@ GUCAA GAGGAGU@LB@ ||||| |||||:|@LB@ CAGUU CUCCUUA@LB@3'-UUU...CCGGG U AAGUA...ACA-5'@LB@ | |@LB@ 56 42@LB@@LB@@LB@Energy -7.84 kcal/mol@LB@Hybridization Energy -13.7308 kcal/mol@LB@Unfolding Energy - mRNA 4.94116 kcal/mol@LB@Unfolding Energy - sRNA 0.946481 kcal/mol@LB@@LB@Position - mRNA 181 -- 195@LB@Position - sRNA 43 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 43 -- 49@LB@ |
146 |
0.02871 |
0.6177 |
b1120 |
cobB |
-8.56 |
0.080407 |
32 -- 40 |
43 -- 51 |
deacetylase of acs and cheY chemotaxis regulator |
|
_____________31________41\n_____________|_________|\n5'-CGC...GAUGC_________GCGUG...AUC-3'\n______________GGGAGGAAU\n______________::|||||||\n______________UUCUCCUUA\n3'-UUU...GCAGU_________AAGUA...ACA-5'\n_____________|_________|\n_____________52________42\n |
34 -- 40 |
43 -- 49 |
-11.3695 kcal/mol |
1.94725 kcal/mol |
0.859837 kcal/mol |
31 41@LB@ | |@LB@5'-CGC...GAUGC GCGUG...AUC-3'@LB@ GGGAGGAAU@LB@ ::|||||||@LB@ UUCUCCUUA@LB@3'-UUU...GCAGU AAGUA...ACA-5'@LB@ | |@LB@ 52 42@LB@@LB@@LB@Energy -8.56 kcal/mol@LB@Hybridization Energy -11.3695 kcal/mol@LB@Unfolding Energy - mRNA 1.94725 kcal/mol@LB@Unfolding Energy - sRNA 0.859837 kcal/mol@LB@@LB@Position - mRNA 32 -- 40@LB@Position - sRNA 43 -- 51@LB@Position Seed - mRNA 34 -- 40@LB@Position Seed - sRNA 43 -- 49@LB@ |