36 |
0.007609 |
0.5562 |
lmo0649 |
N/A |
-18.52 |
0.020396 |
192 -- 219 |
177 -- 204 |
transcriptional regulator |
|
_____________191______220\n_____________|________|\n5'-UUU...AACGA________CAUGG...GUA-3'\n______________GGGAUGAG\n______________||||||||\n______________CCCUACUC\n3'-GUU...UAUUG________CGUAU...GGA-5'\n_____________|________|\n_____________205______176\n |
193 -- 199 |
197 -- 203 |
-13.9784 kcal/mol |
1.5957 kcal/mol |
0.386531 kcal/mol |
191 220@LB@ | |@LB@5'-UUU...AACGA CAUGG...GUA-3'@LB@ GGGAUGAG@LB@ ||||||||@LB@ CCCUACUC@LB@3'-GUU...UAUUG CGUAU...GGA-5'@LB@ | |@LB@ 205 176@LB@@LB@@LB@Energy -18.52 kcal/mol@LB@Hybridization Energy -13.9784 kcal/mol@LB@Unfolding Energy - mRNA 1.5957 kcal/mol@LB@Unfolding Energy - sRNA 0.386531 kcal/mol@LB@@LB@Position - mRNA 192 -- 219@LB@Position - sRNA 177 -- 204@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 197 -- 203@LB@ |
21 |
0.003699 |
0.4469 |
lmo2681 |
kdpB |
-18.50 |
0.020601 |
185 -- 204 |
154 -- 173 |
potassium-transporting ATPase subunit B |
|
_____________184__________________205\n_____________|____________________|\n5'-GCA...UUUCA____________________UGGAA...AUG-3'\n______________AAUGAGGUGAAUGGAAAUGA\n______________||||||:||||||:|||::|\n______________UUACUCUACUUACUUUUGUU\n3'-GUU...GCCGG____________________UAUUA...GGA-5'\n_____________|____________________|\n_____________174__________________153\n |
197 -- 203 |
155 -- 161 |
-22.9313 kcal/mol |
3.41 kcal/mol |
0.959215 kcal/mol |
184 205@LB@ | |@LB@5'-GCA...UUUCA UGGAA...AUG-3'@LB@ AAUGAGGUGAAUGGAAAUGA@LB@ ||||||:||||||:|||::|@LB@ UUACUCUACUUACUUUUGUU@LB@3'-GUU...GCCGG UAUUA...GGA-5'@LB@ | |@LB@ 174 153@LB@@LB@@LB@Energy -18.50 kcal/mol@LB@Hybridization Energy -22.9313 kcal/mol@LB@Unfolding Energy - mRNA 3.41 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 185 -- 204@LB@Position - sRNA 154 -- 173@LB@Position Seed - mRNA 197 -- 203@LB@Position Seed - sRNA 155 -- 161@LB@ |
73 |
0.0193 |
0.6733 |
lmo0405 |
N/A |
-18.50 |
0.020574 |
154 -- 209 |
155 -- 199 |
phosphate transporter |
|
_____________153____________210\n_____________|______________|\n5'-GUG...UUAUG________U_____UACGA...CGA-3'\n______________AUGACGGG_AUGAG\n______________||:|||||_|||||\n______________UAUUGCCC_UACUC\n3'-GUU...AUACG______________CGUAU...GGA-5'\n_____________|______________|\n_____________200____________154\n |
50 -- 56 |
202 -- 208 |
-16.311 kcal/mol |
2.72131 kcal/mol |
0.386761 kcal/mol |
153 210@LB@ | |@LB@5'-GUG...UUAUG U UACGA...CGA-3'@LB@ AUGACGGG AUGAG@LB@ ||:||||| |||||@LB@ UAUUGCCC UACUC@LB@3'-GUU...AUACG CGUAU...GGA-5'@LB@ | |@LB@ 200 154@LB@@LB@@LB@Energy -18.50 kcal/mol@LB@Hybridization Energy -16.311 kcal/mol@LB@Unfolding Energy - mRNA 2.72131 kcal/mol@LB@Unfolding Energy - sRNA 0.386761 kcal/mol@LB@@LB@Position - mRNA 154 -- 209@LB@Position - sRNA 155 -- 199@LB@Position Seed - mRNA 50 -- 56@LB@Position Seed - sRNA 202 -- 208@LB@ |
95 |
0.02474 |
0.6733 |
lmo2446 |
N/A |
-18.44 |
0.021161 |
178 -- 278 |
95 -- 188 |
glycosidase |
|
_____________177____________________279\n_____________|______________________|\n5'-UGA...AGGAA___________GC_A_______GAAAA...ACG-3'\n______________AGUGAGAUGAA__G_AGAACGA\n______________|:|||||||||__|_|:|||:|\n______________UUACUCUACUU__C_UUUUGUU\n3'-GUU...GCCGG___________A__________UAUUA...GGA-5'\n_____________|______________________|\n_____________189____________________94\n |
210 -- 216 |
154 -- 160 |
-17.9823 kcal/mol |
4.45349 kcal/mol |
0.959215 kcal/mol |
177 279@LB@ | |@LB@5'-UGA...AGGAA GC A GAAAA...ACG-3'@LB@ AGUGAGAUGAA G AGAACGA@LB@ |:||||||||| | |:|||:|@LB@ UUACUCUACUU C UUUUGUU@LB@3'-GUU...GCCGG A UAUUA...GGA-5'@LB@ | |@LB@ 189 94@LB@@LB@@LB@Energy -18.44 kcal/mol@LB@Hybridization Energy -17.9823 kcal/mol@LB@Unfolding Energy - mRNA 4.45349 kcal/mol@LB@Unfolding Energy - sRNA 0.959215 kcal/mol@LB@@LB@Position - mRNA 178 -- 278@LB@Position - sRNA 95 -- 188@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 154 -- 160@LB@ |
168 |
0.04649 |
0.7403 |
lmo1875 |
N/A |
-18.37 |
0.021889 |
174 -- 204 |
150 -- 181 |
ABC transporter ATP-binding protein |
|
_____________173_______________205\n_____________|_________________|\n5'-ACA...AACAG__A______________AUGAA...GUU-3'\n______________GA_AUGGAUGGGAAUAA\n______________||_|||:|||::||:||\n______________CU_UACUUACUUUUGUU\n3'-GUU...GGUUA__C______________UAUUA...GGA-5'\n_____________|_________________|\n_____________182_______________149\n |
193 -- 199 |
155 -- 161 |
-14.111 kcal/mol |
2.1341 kcal/mol |
0.933796 kcal/mol |
173 205@LB@ | |@LB@5'-ACA...AACAG A AUGAA...GUU-3'@LB@ GA AUGGAUGGGAAUAA@LB@ || |||:|||::||:||@LB@ CU UACUUACUUUUGUU@LB@3'-GUU...GGUUA C UAUUA...GGA-5'@LB@ | |@LB@ 182 149@LB@@LB@@LB@Energy -18.37 kcal/mol@LB@Hybridization Energy -14.111 kcal/mol@LB@Unfolding Energy - mRNA 2.1341 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 174 -- 204@LB@Position - sRNA 150 -- 181@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 155 -- 161@LB@ |
99 |
0.02562 |
0.6733 |
lmo2201 |
N/A |
-18.35 |
0.022079 |
190 -- 255 |
101 -- 170 |
3-oxoacyl-ACP synthase |
|
_____________189_____________________________________________________________________256\n_____________|_______________________________________________________________________|\n5'-AAC...AUAAG________________________GAAGA__A___GUU__U______G__GCU___A___C__________ACGAU...AUG-3'\n______________GAGAUGAGU__AAAUGGAUAA_GA_____GU_GUU___AC_GGUGUU_GA___GUU__CA__CUAUUGGAA\n______________|||||||:|__|||:::||||_||_____||_||:___||_|:|||:_||___|||__||__|||||||||\n______________CUCUACUUA__UUUGUUUAUU_CU_____CA_CAG___UG_CUACAG_CU___CAA__GU__GAUAACCUU\n3'-GUU...GGUUA_________CU__________A__AAAAC______AUU__U______A__GAU___CG__AA_________CUACC...GGA-5'\n_____________|_______________________________________________________________________|\n_____________171_____________________________________________________________________100\n |
249 -- 255 |
101 -- 107 |
-41.8612 kcal/mol |
11.5076 kcal/mol |
19.339 kcal/mol |
189 256@LB@ | |@LB@5'-AAC...AUAAG GAAGA A GUU U G GCU A C ACGAU...AUG-3'@LB@ GAGAUGAGU AAAUGGAUAA GA GU GUU AC GGUGUU GA GUU CA CUAUUGGAA@LB@ |||||||:| |||:::|||| || || ||: || |:|||: || ||| || |||||||||@LB@ CUCUACUUA UUUGUUUAUU CU CA CAG UG CUACAG CU CAA GU GAUAACCUU@LB@3'-GUU...GGUUA CU A AAAAC AUU U A GAU CG AA CUACC...GGA-5'@LB@ | |@LB@ 171 100@LB@@LB@@LB@Energy -18.35 kcal/mol@LB@Hybridization Energy -41.8612 kcal/mol@LB@Unfolding Energy - mRNA 11.5076 kcal/mol@LB@Unfolding Energy - sRNA 19.339 kcal/mol@LB@@LB@Position - mRNA 190 -- 255@LB@Position - sRNA 101 -- 170@LB@Position Seed - mRNA 249 -- 255@LB@Position Seed - sRNA 101 -- 107@LB@ |
38 |
0.007855 |
0.5562 |
lmo1229 |
N/A |
-18.27 |
0.022927 |
193 -- 228 |
147 -- 186 |
|
|
_____________192_______________________________________229\n_____________|_________________________________________|\n5'-AUU...AGGAG___U_________A________________UA_________CAACA...GCG-3'\n______________GAA_UUACGUGGC_AAUGAGA_____GAAA__AAGUAGUGA\n______________|||_:|||::|||_|||||||_____||||__||:||:|||\n______________CUU_GAUGUGCCG_UUACUCU_____CUUU__UUUAUUACU\n3'-GUU...CUGUA_____________G_______ACUUA____UG_________AAAAC...GGA-5'\n_____________|_________________________________________|\n_____________187_______________________________________146\n |
207 -- 213 |
167 -- 173 |
-29.0601 kcal/mol |
3.84241 kcal/mol |
14.4129 kcal/mol |
192 229@LB@ | |@LB@5'-AUU...AGGAG U A UA CAACA...GCG-3'@LB@ GAA UUACGUGGC AAUGAGA GAAA AAGUAGUGA@LB@ ||| :|||::||| ||||||| |||| ||:||:|||@LB@ CUU GAUGUGCCG UUACUCU CUUU UUUAUUACU@LB@3'-GUU...CUGUA G ACUUA UG AAAAC...GGA-5'@LB@ | |@LB@ 187 146@LB@@LB@@LB@Energy -18.27 kcal/mol@LB@Hybridization Energy -29.0601 kcal/mol@LB@Unfolding Energy - mRNA 3.84241 kcal/mol@LB@Unfolding Energy - sRNA 14.4129 kcal/mol@LB@@LB@Position - mRNA 193 -- 228@LB@Position - sRNA 147 -- 186@LB@Position Seed - mRNA 207 -- 213@LB@Position Seed - sRNA 167 -- 173@LB@ |
178 |
0.05066 |
0.7607 |
lmo0216 |
N/A |
-18.27 |
0.022949 |
55 -- 114 |
166 -- 213 |
|
|
_____________54__________________________________________________________________________________115\n_____________|___________________________________________________________________________________|\n5'-GCG...UCCAA__AAU______A______A__A___G__________UUUCCUUGUUUUU___CUA______A______U___U____A_____UUUGU...CGG-3'\n______________GC_____UGUU___GUGC_CU_GUG_GUGGCGGGAU_____________GCA___AGAUAU_AAUUAC_CGG_CCAA__AGAU\n______________||_____||||___|:||_||_:||_:|::||||||_____________|||___|||:||_||:|||_|||_||||__||||\n______________CG_____ACAA___CGCG_GA_UAC_UAUUGCCCUA_____________CGU___UCUGUA_UUGAUG_GCC_GGUU__UCUA\n3'-GUU...CGCAA__GUAGU____GCC___________G__________CUC_____________A________C______U________AC____CUUAC...GGA-5'\n_____________|___________________________________________________________________________________|\n_____________214_________________________________________________________________________________165\n |
62 -- 68 |
200 -- 206 |
-50.1796 kcal/mol |
16.7648 kcal/mol |
22.1647 kcal/mol |
54 115@LB@ | |@LB@5'-GCG...UCCAA AAU A A A G UUUCCUUGUUUUU CUA A U U A UUUGU...CGG-3'@LB@ GC UGUU GUGC CU GUG GUGGCGGGAU GCA AGAUAU AAUUAC CGG CCAA AGAU@LB@ || |||| |:|| || :|| :|::|||||| ||| |||:|| ||:||| ||| |||| ||||@LB@ CG ACAA CGCG GA UAC UAUUGCCCUA CGU UCUGUA UUGAUG GCC GGUU UCUA@LB@3'-GUU...CGCAA GUAGU GCC G CUC A C U AC CUUAC...GGA-5'@LB@ | |@LB@ 214 165@LB@@LB@@LB@Energy -18.27 kcal/mol@LB@Hybridization Energy -50.1796 kcal/mol@LB@Unfolding Energy - mRNA 16.7648 kcal/mol@LB@Unfolding Energy - sRNA 22.1647 kcal/mol@LB@@LB@Position - mRNA 55 -- 114@LB@Position - sRNA 166 -- 213@LB@Position Seed - mRNA 62 -- 68@LB@Position Seed - sRNA 200 -- 206@LB@ |
49 |
0.01139 |
0.599 |
lmo0181 |
N/A |
-18.25 |
0.023109 |
147 -- 168 |
157 -- 179 |
sugar ABC transporter substrate-binding protein |
|
_____________146________________169\n_____________|__________________|\n5'-AAG...AAUGG_______CG_________AAUAA...UUA-3'\n______________CAAUGAG__GAAUGAAAG\n______________|||||||__||||||||:\n______________GUUACUC__CUUACUUUU\n3'-GUU...UGCCG_______UA_________GUUUA...GGA-5'\n_____________|__________________|\n_____________180________________156\n |
162 -- 168 |
157 -- 163 |
-17.3464 kcal/mol |
2.46271 kcal/mol |
0.933292 kcal/mol |
146 169@LB@ | |@LB@5'-AAG...AAUGG CG AAUAA...UUA-3'@LB@ CAAUGAG GAAUGAAAG@LB@ ||||||| ||||||||:@LB@ GUUACUC CUUACUUUU@LB@3'-GUU...UGCCG UA GUUUA...GGA-5'@LB@ | |@LB@ 180 156@LB@@LB@@LB@Energy -18.25 kcal/mol@LB@Hybridization Energy -17.3464 kcal/mol@LB@Unfolding Energy - mRNA 2.46271 kcal/mol@LB@Unfolding Energy - sRNA 0.933292 kcal/mol@LB@@LB@Position - mRNA 147 -- 168@LB@Position - sRNA 157 -- 179@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 157 -- 163@LB@ |
66 |
0.01668 |
0.6733 |
lmo0959 |
N/A |
-18.16 |
0.024105 |
185 -- 212 |
177 -- 206 |
undacaprenyl-phosphate N-acetylglucosaminyltransferase |
|
_____________184________________213\n_____________|__________________|\n5'-GAA...AAGUA_____________A____AUUUG...CAG-3'\n______________UAAUGAGAUGAGU_AAAA\n______________:||||||||||:|_||||\n______________GUUACUCUACUUA_UUUU\n3'-GUU...UGCCG_____________C____GUUUA...GGA-5'\n_____________|__________________|\n_____________207________________176\n |
169 -- 175 |
162 -- 168 |
-15.497 kcal/mol |
1.5517 kcal/mol |
0.933292 kcal/mol |
184 213@LB@ | |@LB@5'-GAA...AAGUA A AUUUG...CAG-3'@LB@ UAAUGAGAUGAGU AAAA@LB@ :||||||||||:| ||||@LB@ GUUACUCUACUUA UUUU@LB@3'-GUU...UGCCG C GUUUA...GGA-5'@LB@ | |@LB@ 207 176@LB@@LB@@LB@Energy -18.16 kcal/mol@LB@Hybridization Energy -15.497 kcal/mol@LB@Unfolding Energy - mRNA 1.5517 kcal/mol@LB@Unfolding Energy - sRNA 0.933292 kcal/mol@LB@@LB@Position - mRNA 185 -- 212@LB@Position - sRNA 177 -- 206@LB@Position Seed - mRNA 169 -- 175@LB@Position Seed - sRNA 162 -- 168@LB@ |