161 |
0.006501 |
0.1413 |
b2682 |
ygaZ |
-8.47 |
0.118892 |
208 -- 214 |
1 -- 7 |
putative L-valine exporter norvaline resistance protein |
|
_____________207_____215\n_____________|_______|\n5'-UGG...GGAAA_______UCCAC...CCU-3'\n______________GCCCUAC\n______________:||||||\n______________UGGGAUG\n3'-AUU...AGACA_______-5'\n_____________|______|\n_____________8______1\n |
208 -- 214 |
1 -- 7 |
-11.2451 kcal/mol |
0.761293 kcal/mol |
2.03949 kcal/mol |
207 215@LB@ | |@LB@5'-UGG...GGAAA UCCAC...CCU-3'@LB@ GCCCUAC@LB@ :||||||@LB@ UGGGAUG@LB@3'-AUU...AGACA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -8.47 kcal/mol@LB@Hybridization Energy -11.2451 kcal/mol@LB@Unfolding Energy - mRNA 0.761293 kcal/mol@LB@Unfolding Energy - sRNA 2.03949 kcal/mol@LB@@LB@Position - mRNA 208 -- 214@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 1 -- 7@LB@ |
162 |
0.006534 |
0.1413 |
b3771 |
ilvD |
-6.87 |
0.280008 |
44 -- 51 |
49 -- 56 |
dihydroxyacid dehydratase |
|
_____________43_______52\n_____________|________|\n5'-GCG...GUGGC________CAAAC...GUA-3'\n______________CCGGUUAC\n______________|||:||||\n______________GGCUAAUG\n3'-AUU...GUUUA________CACUU...AUG-5'\n_____________|________|\n_____________57_______48\n |
45 -- 51 |
49 -- 55 |
-9.72973 kcal/mol |
2.55538 kcal/mol |
0.317884 kcal/mol |
43 52@LB@ | |@LB@5'-GCG...GUGGC CAAAC...GUA-3'@LB@ CCGGUUAC@LB@ |||:||||@LB@ GGCUAAUG@LB@3'-AUU...GUUUA CACUU...AUG-5'@LB@ | |@LB@ 57 48@LB@@LB@@LB@Energy -6.87 kcal/mol@LB@Hybridization Energy -9.72973 kcal/mol@LB@Unfolding Energy - mRNA 2.55538 kcal/mol@LB@Unfolding Energy - sRNA 0.317884 kcal/mol@LB@@LB@Position - mRNA 44 -- 51@LB@Position - sRNA 49 -- 56@LB@Position Seed - mRNA 45 -- 51@LB@Position Seed - sRNA 49 -- 55@LB@ |
163 |
0.006545 |
0.1413 |
b0532 |
sfmD |
-7.71 |
0.181786 |
104 -- 132 |
48 -- 76 |
putative outer membrane export usher protein |
b3144 b4317 b0940 |
_____________103____________________________133\n_____________|______________________________|\n5'-UCA...GGAAA______________A___UUAA________GUUCA...GCU-3'\n______________GCUGAAAU_UUCAG_CCG____UGAUUAUG\n______________|||:||||_|||||_||:____:|||||:|\n______________CGAUUUUA_AAGUC_GGU____GCUAAUGC\n3'-AUU...CCCGC________U_________UUAG________ACUUC...AUG-5'\n_____________|______________________________|\n_____________77_____________________________47\n |
126 -- 132 |
48 -- 54 |
-23.9612 kcal/mol |
8.59534 kcal/mol |
7.67378 kcal/mol |
103 133@LB@ | |@LB@5'-UCA...GGAAA A UUAA GUUCA...GCU-3'@LB@ GCUGAAAU UUCAG CCG UGAUUAUG@LB@ |||:|||| ||||| ||: :|||||:|@LB@ CGAUUUUA AAGUC GGU GCUAAUGC@LB@3'-AUU...CCCGC U UUAG ACUUC...AUG-5'@LB@ | |@LB@ 77 47@LB@@LB@@LB@Energy -7.71 kcal/mol@LB@Hybridization Energy -23.9612 kcal/mol@LB@Unfolding Energy - mRNA 8.59534 kcal/mol@LB@Unfolding Energy - sRNA 7.67378 kcal/mol@LB@@LB@Position - mRNA 104 -- 132@LB@Position - sRNA 48 -- 76@LB@Position Seed - mRNA 126 -- 132@LB@Position Seed - sRNA 48 -- 54@LB@ |
164 |
0.006623 |
0.1421 |
b2278 |
nuoL |
-8.77 |
0.099276 |
203 -- 221 |
5 -- 24 |
NADH:ubiquinone oxidoreductase membrane subunit L |
|
_____________202___________________222\n_____________|_____________________|\n5'-GGU...CGGAU______G________A_____AUUAU...UCG-3'\n______________GAACAU_CUUGCCUU___ACC\n______________||||||_|||:|||:___|||\n______________CUUGUA_GAAUGGAG___UGG\n3'-AUU...UCUAU_______________ACA___GAUG-5'\n_____________|_____________________|\n_____________25____________________4\n |
211 -- 217 |
11 -- 17 |
-20.7037 kcal/mol |
3.94864 kcal/mol |
8.01095 kcal/mol |
202 222@LB@ | |@LB@5'-GGU...CGGAU G A AUUAU...UCG-3'@LB@ GAACAU CUUGCCUU ACC@LB@ |||||| |||:|||: |||@LB@ CUUGUA GAAUGGAG UGG@LB@3'-AUU...UCUAU ACA GAUG-5'@LB@ | |@LB@ 25 4@LB@@LB@@LB@Energy -8.77 kcal/mol@LB@Hybridization Energy -20.7037 kcal/mol@LB@Unfolding Energy - mRNA 3.94864 kcal/mol@LB@Unfolding Energy - sRNA 8.01095 kcal/mol@LB@@LB@Position - mRNA 203 -- 221@LB@Position - sRNA 5 -- 24@LB@Position Seed - mRNA 211 -- 217@LB@Position Seed - sRNA 11 -- 17@LB@ |
165 |
0.006672 |
0.1423 |
b1651 |
gloA |
-7.94 |
0.160716 |
101 -- 108 |
49 -- 56 |
glyoxalase I Ni-dependent |
|
_____________100______109\n_____________|________|\n5'-UGG...CUAUA________CCGAC...AAA-3'\n______________CCGAUUAC\n______________||||||||\n______________GGCUAAUG\n3'-AUU...GUUUA________CACUU...AUG-5'\n_____________|________|\n_____________57_______48\n |
102 -- 108 |
49 -- 55 |
-10.6899 kcal/mol |
2.44421 kcal/mol |
0.317884 kcal/mol |
100 109@LB@ | |@LB@5'-UGG...CUAUA CCGAC...AAA-3'@LB@ CCGAUUAC@LB@ ||||||||@LB@ GGCUAAUG@LB@3'-AUU...GUUUA CACUU...AUG-5'@LB@ | |@LB@ 57 48@LB@@LB@@LB@Energy -7.94 kcal/mol@LB@Hybridization Energy -10.6899 kcal/mol@LB@Unfolding Energy - mRNA 2.44421 kcal/mol@LB@Unfolding Energy - sRNA 0.317884 kcal/mol@LB@@LB@Position - mRNA 101 -- 108@LB@Position - sRNA 49 -- 56@LB@Position Seed - mRNA 102 -- 108@LB@Position Seed - sRNA 49 -- 55@LB@ |
166 |
0.006804 |
0.1439 |
b0475 |
hemH |
-7.56 |
0.197603 |
220 -- 228 |
1 -- 9 |
ferrochelatase |
|
_____________219_______229\n_____________|_________|\n5'-CGG...AACCG_________UGGCA...GCG-3'\n______________GUAUCCUGC\n______________|||:|||:|\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
222 -- 228 |
1 -- 7 |
-12.5413 kcal/mol |
2.87943 kcal/mol |
2.12872 kcal/mol |
219 229@LB@ | |@LB@5'-CGG...AACCG UGGCA...GCG-3'@LB@ GUAUCCUGC@LB@ |||:|||:|@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -7.56 kcal/mol@LB@Hybridization Energy -12.5413 kcal/mol@LB@Unfolding Energy - mRNA 2.87943 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 220 -- 228@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 1 -- 7@LB@ |
167 |
0.00683 |
0.1439 |
b0387 |
yaiI |
-9.54 |
0.061403 |
53 -- 70 |
51 -- 65 |
UPF0178 family protein |
|
_____________52_________________71\n_____________|__________________|\n5'-CAC...UGCCG_______UAAAA______UUCUU...CAA-3'\n______________CAGCCAA_____CCGAUU\n______________|||||||_____||||||\n______________GUCGGUU_____GGCUAA\n3'-AUU...UAUAA_______UA_________UGCAC...AUG-5'\n_____________|__________________|\n_____________66_________________50\n |
53 -- 59 |
59 -- 65 |
-16.8495 kcal/mol |
1.14267 kcal/mol |
6.18987 kcal/mol |
52 71@LB@ | |@LB@5'-CAC...UGCCG UAAAA UUCUU...CAA-3'@LB@ CAGCCAA CCGAUU@LB@ ||||||| ||||||@LB@ GUCGGUU GGCUAA@LB@3'-AUU...UAUAA UA UGCAC...AUG-5'@LB@ | |@LB@ 66 50@LB@@LB@@LB@Energy -9.54 kcal/mol@LB@Hybridization Energy -16.8495 kcal/mol@LB@Unfolding Energy - mRNA 1.14267 kcal/mol@LB@Unfolding Energy - sRNA 6.18987 kcal/mol@LB@@LB@Position - mRNA 53 -- 70@LB@Position - sRNA 51 -- 65@LB@Position Seed - mRNA 53 -- 59@LB@Position Seed - sRNA 59 -- 65@LB@ |
168 |
0.006917 |
0.1448 |
b3070 |
yqjH |
-8.25 |
0.134865 |
172 -- 181 |
49 -- 58 |
putative siderophore interacting protein |
|
_____________171________182\n_____________|__________|\n5'-ACU...GAUAU__________CAUCA...AGC-3'\n______________AUCUGAUUAC\n______________|||:||||||\n______________UAGGCUAAUG\n3'-AUU...CGGUU__________CACUU...AUG-5'\n_____________|__________|\n_____________59_________48\n |
175 -- 181 |
49 -- 55 |
-10.8722 kcal/mol |
2.31397 kcal/mol |
0.318367 kcal/mol |
171 182@LB@ | |@LB@5'-ACU...GAUAU CAUCA...AGC-3'@LB@ AUCUGAUUAC@LB@ |||:||||||@LB@ UAGGCUAAUG@LB@3'-AUU...CGGUU CACUU...AUG-5'@LB@ | |@LB@ 59 48@LB@@LB@@LB@Energy -8.25 kcal/mol@LB@Hybridization Energy -10.8722 kcal/mol@LB@Unfolding Energy - mRNA 2.31397 kcal/mol@LB@Unfolding Energy - sRNA 0.318367 kcal/mol@LB@@LB@Position - mRNA 172 -- 181@LB@Position - sRNA 49 -- 58@LB@Position Seed - mRNA 175 -- 181@LB@Position Seed - sRNA 49 -- 55@LB@ |
169 |
0.006985 |
0.1454 |
b0384 |
psiF |
-5.27 |
0.543574 |
221 -- 228 |
1 -- 8 |
PsiF family protein |
|
_____________220______229\n_____________|________|\n5'-CCC...CUGGU________UUUUC...UGA-3'\n______________UACCUUGC\n______________||||:|:|\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
222 -- 228 |
1 -- 7 |
-9.62499 kcal/mol |
2.26355 kcal/mol |
2.11603 kcal/mol |
220 229@LB@ | |@LB@5'-CCC...CUGGU UUUUC...UGA-3'@LB@ UACCUUGC@LB@ ||||:|:|@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -5.27 kcal/mol@LB@Hybridization Energy -9.62499 kcal/mol@LB@Unfolding Energy - mRNA 2.26355 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 221 -- 228@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 1 -- 7@LB@ |
170 |
0.007042 |
0.1457 |
b3110 |
yhaO |
-10.02 |
0.044877 |
174 -- 180 |
1 -- 7 |
putative transporter |
|
_____________173_____181\n_____________|_______|\n5'-AAU...AAUAA_______AAAAU...UCG-3'\n______________GCCCUAC\n______________:||||||\n______________UGGGAUG\n3'-AUU...AGACA_______-5'\n_____________|______|\n_____________8______1\n |
174 -- 180 |
1 -- 7 |
-12.6531 kcal/mol |
0.621925 kcal/mol |
2.03949 kcal/mol |
173 181@LB@ | |@LB@5'-AAU...AAUAA AAAAU...UCG-3'@LB@ GCCCUAC@LB@ :||||||@LB@ UGGGAUG@LB@3'-AUU...AGACA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -10.02 kcal/mol@LB@Hybridization Energy -12.6531 kcal/mol@LB@Unfolding Energy - mRNA 0.621925 kcal/mol@LB@Unfolding Energy - sRNA 2.03949 kcal/mol@LB@@LB@Position - mRNA 174 -- 180@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 174 -- 180@LB@Position Seed - sRNA 1 -- 7@LB@ |