| 57 |
0.00565 |
0.3247 |
b2081 |
yegQ |
-17.30 |
0.009213 |
136 -- 160 |
1 -- 21 |
putative peptidase |
|
_____________135_______________________161\n_____________|_________________________|\n5'-AUU...AAGUG_______U_____AACC________AGGUG...GUU-3'\n______________GGGGCAC_CCCCU____GCUUCAUC\n______________|||||||_|||||____||||||||\n______________CCCCGUG_GGGGA____CGAAGUAG\n3'-UUU...GCGUA_____________A___________-5'\n_____________|________________________|\n_____________22_______________________1\n |
154 -- 160 |
1 -- 7 |
-36.7075 kcal/mol |
11.7869 kcal/mol |
10.2895 kcal/mol |
135 161@LB@ | |@LB@5'-AUU...AAGUG U AACC AGGUG...GUU-3'@LB@ GGGGCAC CCCCU GCUUCAUC@LB@ ||||||| ||||| ||||||||@LB@ CCCCGUG GGGGA CGAAGUAG@LB@3'-UUU...GCGUA A -5'@LB@ | |@LB@ 22 1@LB@@LB@@LB@Energy -17.30 kcal/mol@LB@Hybridization Energy -36.7075 kcal/mol@LB@Unfolding Energy - mRNA 11.7869 kcal/mol@LB@Unfolding Energy - sRNA 10.2895 kcal/mol@LB@@LB@Position - mRNA 136 -- 160@LB@Position - sRNA 1 -- 21@LB@Position Seed - mRNA 154 -- 160@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 118 |
0.01293 |
0.3575 |
b1598 |
ydgD |
-17.08 |
0.010207 |
53 -- 140 |
115 -- 186 |
putative peptidase |
|
_____________52______________________________________________________________________141\n_____________|_______________________________________________________________________|\n5'-CUU...AUCCU_____UAUG__________UACC__CC___UUUAU_____CU______A____UCUGAUUUUAC_______UUCAU...AGG-3'\n______________UAUUU____CGCAC_UGAU____GC__GUU_____CUUUC__GAUUGU_GUUA___________UCCCACU\n______________||:|:____|:|||_||||____||__||:_____|||||__:||||:_||:|___________|||||||\n______________AUGAG____GUGUG_ACUA____CG__CAG_____GAAAG__UUAACG_CAGU___________AGGGUGA\n3'-UUU...UGGUU_____UCA______U____CGUC__UU___UU________UC______C______________________CGUAG...UAG-5'\n_____________|_______________________________________________________________________|\n_____________187_____________________________________________________________________114\n |
122 -- 128 |
125 -- 131 |
-34.2678 kcal/mol |
6.55961 kcal/mol |
16.6417 kcal/mol |
52 141@LB@ | |@LB@5'-CUU...AUCCU UAUG UACC CC UUUAU CU A UCUGAUUUUAC UUCAU...AGG-3'@LB@ UAUUU CGCAC UGAU GC GUU CUUUC GAUUGU GUUA UCCCACU@LB@ ||:|: |:||| |||| || ||: ||||| :||||: ||:| |||||||@LB@ AUGAG GUGUG ACUA CG CAG GAAAG UUAACG CAGU AGGGUGA@LB@3'-UUU...UGGUU UCA U CGUC UU UU UC C CGUAG...UAG-5'@LB@ | |@LB@ 187 114@LB@@LB@@LB@Energy -17.08 kcal/mol@LB@Hybridization Energy -34.2678 kcal/mol@LB@Unfolding Energy - mRNA 6.55961 kcal/mol@LB@Unfolding Energy - sRNA 16.6417 kcal/mol@LB@@LB@Position - mRNA 53 -- 140@LB@Position - sRNA 115 -- 186@LB@Position Seed - mRNA 122 -- 128@LB@Position Seed - sRNA 125 -- 131@LB@ |
| 9 |
0.0005653 |
0.1842 |
b3527 |
yhjJ |
-12.58 |
0.084694 |
198 -- 237 |
133 -- 170 |
putative periplasmic M16 family chaperone |
|
_____________197__________________________________________________238\n_____________|____________________________________________________|\n5'-CUC...GUUGA____GGGUU______CA_______CAAAAAU___________CGG_______UGCUG...GGC-3'\n______________UCAG_____CACAUG____GGGCA_______UCGACUUUUAG____GCGGUU\n______________||||_____||||||____:||||_______||:|||||:||____|||||:\n______________AGUC_____GUGUAC____UCCGU_______AGUUGAAAGUC____CGCCAG\n3'-UUU...UUAUG____AGU________UACG_____UC________________UUAA______UAGGG...UAG-5'\n_____________|____________________________________________________|\n_____________171__________________________________________________132\n |
222 -- 228 |
143 -- 149 |
-37.5898 kcal/mol |
10.9006 kcal/mol |
12.7286 kcal/mol |
197 238@LB@ | |@LB@5'-CUC...GUUGA GGGUU CA CAAAAAU CGG UGCUG...GGC-3'@LB@ UCAG CACAUG GGGCA UCGACUUUUAG GCGGUU@LB@ |||| |||||| :|||| ||:|||||:|| |||||:@LB@ AGUC GUGUAC UCCGU AGUUGAAAGUC CGCCAG@LB@3'-UUU...UUAUG AGU UACG UC UUAA UAGGG...UAG-5'@LB@ | |@LB@ 171 132@LB@@LB@@LB@Energy -12.58 kcal/mol@LB@Hybridization Energy -37.5898 kcal/mol@LB@Unfolding Energy - mRNA 10.9006 kcal/mol@LB@Unfolding Energy - sRNA 12.7286 kcal/mol@LB@@LB@Position - mRNA 198 -- 237@LB@Position - sRNA 133 -- 170@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 143 -- 149@LB@ |
| 144 |
0.01541 |
0.3575 |
b4555 |
yicS |
-14.57 |
0.033136 |
213 -- 290 |
115 -- 187 |
putative periplasmic protein |
|
_____________212_________________________________________________________________291\n_____________|___________________________________________________________________|\n5'-AUU...CAACG______C______UUU____UUUUUUC__U_____C______UCGUAUACGCCG_____C_______CUCAC...AGA-3'\n______________ACACUA_UGCUUA___UCAC_______GC___AUG_CAGGCA____________AGUCG_CUUUUAG\n______________||||:|_|:||:|___||||_______:|___|||_||||||____________||||:_||||:||\n______________UGUGGU_AUGAGU___AGUG_______UG___UAC_GUCCGU____________UCAGU_GAAAGUC\n3'-UUU...UAAAA______U______C_______________UAC___________________________U_______UUAAC...UAG-5'\n_____________|___________________________________________________________________|\n_____________188_________________________________________________________________114\n |
271 -- 277 |
143 -- 149 |
-34.4495 kcal/mol |
11.6435 kcal/mol |
13.2932 kcal/mol |
212 291@LB@ | |@LB@5'-AUU...CAACG C UUU UUUUUUC U C UCGUAUACGCCG C CUCAC...AGA-3'@LB@ ACACUA UGCUUA UCAC GC AUG CAGGCA AGUCG CUUUUAG@LB@ ||||:| |:||:| |||| :| ||| |||||| ||||: ||||:||@LB@ UGUGGU AUGAGU AGUG UG UAC GUCCGU UCAGU GAAAGUC@LB@3'-UUU...UAAAA U C UAC U UUAAC...UAG-5'@LB@ | |@LB@ 188 114@LB@@LB@@LB@Energy -14.57 kcal/mol@LB@Hybridization Energy -34.4495 kcal/mol@LB@Unfolding Energy - mRNA 11.6435 kcal/mol@LB@Unfolding Energy - sRNA 13.2932 kcal/mol@LB@@LB@Position - mRNA 213 -- 290@LB@Position - sRNA 115 -- 187@LB@Position Seed - mRNA 271 -- 277@LB@Position Seed - sRNA 143 -- 149@LB@ |
| 172 |
0.01969 |
0.3812 |
b0213 |
yafS |
-9.47 |
0.344290 |
95 -- 113 |
1 -- 19 |
putative S-adenosyl-L-methionine-dependent methyltransferase |
|
_____________94________114\n_____________|_________|\n5'-UGG...UCAAA_________CUCCU...UCA-3'\n______________CUGUCGUGG\n______________||||||:||\n______________GACAGCGCC\n3'-UUU...GAAGC_________AUUUU...UAG-5'\n_____________|_________|\n_____________20________0\n |
228 -- 234 |
50 -- 56 |
-16.2917 kcal/mol |
2.78861 kcal/mol |
4.02 kcal/mol |
94 114@LB@ | |@LB@5'-UGG...UCAAA CUCCU...UCA-3'@LB@ CUGUCGUGG@LB@ ||||||:||@LB@ GACAGCGCC@LB@3'-UUU...GAAGC AUUUU...UAG-5'@LB@ | |@LB@ 20 0@LB@@LB@@LB@Energy -9.47 kcal/mol@LB@Hybridization Energy -16.2917 kcal/mol@LB@Unfolding Energy - mRNA 2.78861 kcal/mol@LB@Unfolding Energy - sRNA 4.02 kcal/mol@LB@@LB@Position - mRNA 95 -- 113@LB@Position - sRNA 1 -- 19@LB@Position Seed - mRNA 228 -- 234@LB@Position Seed - sRNA 50 -- 56@LB@ |
| 116 |
0.01276 |
0.3575 |
b2989 |
yghU |
-14.25 |
0.038539 |
247 -- 281 |
170 -- 208 |
putative S-transferase |
|
_____________246______________________________________282\n_____________|________________________________________|\n5'-UUA...GGAUA____C________C_C_UU________________A____CCGGU...CGC-3'\n______________AAUC_GCUGGCGG_G_G______CGCCAAUA_UCA_UCGC\n______________||||_||||||||_|_|______|:||||||_|||_||:|\n______________UUAG_CGACCGCC_C_C______GUGGUUAU_AGU_AGUG\n3'-UUU...CCAUA____A__________A_UAAAAU________G___C____UGUAC...UAG-5'\n_____________|________________________________________|\n_____________209______________________________________169\n |
267 -- 273 |
179 -- 185 |
-35.9489 kcal/mol |
9.63265 kcal/mol |
15.256 kcal/mol |
246 282@LB@ | |@LB@5'-UUA...GGAUA C C C UU A CCGGU...CGC-3'@LB@ AAUC GCUGGCGG G G CGCCAAUA UCA UCGC@LB@ |||| |||||||| | | |:|||||| ||| ||:|@LB@ UUAG CGACCGCC C C GUGGUUAU AGU AGUG@LB@3'-UUU...CCAUA A A UAAAAU G C UGUAC...UAG-5'@LB@ | |@LB@ 209 169@LB@@LB@@LB@Energy -14.25 kcal/mol@LB@Hybridization Energy -35.9489 kcal/mol@LB@Unfolding Energy - mRNA 9.63265 kcal/mol@LB@Unfolding Energy - sRNA 15.256 kcal/mol@LB@@LB@Position - mRNA 247 -- 281@LB@Position - sRNA 170 -- 208@LB@Position Seed - mRNA 267 -- 273@LB@Position Seed - sRNA 179 -- 185@LB@ |
| 86 |
0.009326 |
0.3575 |
b0899 |
ycaM |
-11.50 |
0.140486 |
23 -- 68 |
127 -- 173 |
putative transporter |
|
_____________22_______________________________________________________69\n_____________|________________________________________________________|\n5'-AGC...GAACU____GUU______UC_____UUUUUU___UCUU__A__U__C____U_________AAUUU...AUG-3'\n______________UACU___UCACAC____UGC______GUU____CU_UC_GA_UUGC__UUAUUCCA\n______________||||___||||||____|||______||:____||_||_||_||||__|:||:|||\n______________AUGA___AGUGUG____ACG______CAG____GA_AG_CU_AACG__AGUAGGGU\n3'-UUU...UGGUU____GUC______UACU___UCCGUU___UU____A__U__U____CC________GACGU...UAG-5'\n_____________|________________________________________________________|\n_____________174______________________________________________________126\n |
62 -- 68 |
127 -- 133 |
-29.7478 kcal/mol |
2.56458 kcal/mol |
15.6497 kcal/mol |
22 69@LB@ | |@LB@5'-AGC...GAACU GUU UC UUUUUU UCUU A U C U AAUUU...AUG-3'@LB@ UACU UCACAC UGC GUU CU UC GA UUGC UUAUUCCA@LB@ |||| |||||| ||| ||: || || || |||| |:||:|||@LB@ AUGA AGUGUG ACG CAG GA AG CU AACG AGUAGGGU@LB@3'-UUU...UGGUU GUC UACU UCCGUU UU A U U CC GACGU...UAG-5'@LB@ | |@LB@ 174 126@LB@@LB@@LB@Energy -11.50 kcal/mol@LB@Hybridization Energy -29.7478 kcal/mol@LB@Unfolding Energy - mRNA 2.56458 kcal/mol@LB@Unfolding Energy - sRNA 15.6497 kcal/mol@LB@@LB@Position - mRNA 23 -- 68@LB@Position - sRNA 127 -- 173@LB@Position Seed - mRNA 62 -- 68@LB@Position Seed - sRNA 127 -- 133@LB@ |
| 97 |
0.01056 |
0.3575 |
b2372 |
yfdV |
-22.84 |
0.000764 |
17 -- 36 |
167 -- 186 |
putative transporter |
|
_____________16___________________37\n_____________|____________________|\n5'-UUC...UUAAC____________________AACCG...CUC-3'\n______________CACCGGUAUUCAGUCGCGCA\n______________||||::||:||||||:|:||\n______________GUGGUUAUGAGUCAGUGUGU\n3'-UUU...AAAAU____________________ACUAC...UAG-5'\n_____________|____________________|\n_____________187__________________166\n |
30 -- 36 |
167 -- 173 |
-32.2779 kcal/mol |
2.6891 kcal/mol |
5.05466 kcal/mol |
16 37@LB@ | |@LB@5'-UUC...UUAAC AACCG...CUC-3'@LB@ CACCGGUAUUCAGUCGCGCA@LB@ ||||::||:||||||:|:||@LB@ GUGGUUAUGAGUCAGUGUGU@LB@3'-UUU...AAAAU ACUAC...UAG-5'@LB@ | |@LB@ 187 166@LB@@LB@@LB@Energy -22.84 kcal/mol@LB@Hybridization Energy -32.2779 kcal/mol@LB@Unfolding Energy - mRNA 2.6891 kcal/mol@LB@Unfolding Energy - sRNA 5.05466 kcal/mol@LB@@LB@Position - mRNA 17 -- 36@LB@Position - sRNA 167 -- 186@LB@Position Seed - mRNA 30 -- 36@LB@Position Seed - sRNA 167 -- 173@LB@ |
| 168 |
0.01937 |
0.3812 |
b4354 |
yjiY |
-11.43 |
0.145336 |
99 -- 125 |
132 -- 159 |
putative transporter |
|
_____________98__________________________________________________126\n_____________|___________________________________________________|\n5'-CUU...UACCU_____UACG_______AACUCU_____CA______A_______A_______AUUUA...ACA-3'\n______________UACUU____CGCGCGU______GGCAA__UC_ACU__CAGGAU_GCGGUCA\n______________||||:____|:|:|:|______|||||__||_|||__|||:||_|||||||\n______________AUGAG____GUGUGUA______CCGUU__AG_UGA__GUCUUA_CGCCAGU\n3'-UUU...UGGUU_____UCA________CUACGU_____C___U___AA______A_______AGGGU...UAG-5'\n_____________|___________________________________________________|\n_____________160_________________________________________________131\n |
119 -- 125 |
132 -- 138 |
-39.8751 kcal/mol |
13.2469 kcal/mol |
12.8104 kcal/mol |
98 126@LB@ | |@LB@5'-CUU...UACCU UACG AACUCU CA A A AUUUA...ACA-3'@LB@ UACUU CGCGCGU GGCAA UC ACU CAGGAU GCGGUCA@LB@ ||||: |:|:|:| ||||| || ||| |||:|| |||||||@LB@ AUGAG GUGUGUA CCGUU AG UGA GUCUUA CGCCAGU@LB@3'-UUU...UGGUU UCA CUACGU C U AA A AGGGU...UAG-5'@LB@ | |@LB@ 160 131@LB@@LB@@LB@Energy -11.43 kcal/mol@LB@Hybridization Energy -39.8751 kcal/mol@LB@Unfolding Energy - mRNA 13.2469 kcal/mol@LB@Unfolding Energy - sRNA 12.8104 kcal/mol@LB@@LB@Position - mRNA 99 -- 125@LB@Position - sRNA 132 -- 159@LB@Position Seed - mRNA 119 -- 125@LB@Position Seed - sRNA 132 -- 138@LB@ |
| 187 |
0.02173 |
0.3833 |
b3679 |
yidK |
-10.16 |
0.256396 |
240 -- 256 |
191 -- 205 |
putative transporter |
|
_____________239________________________________________257\n_____________|__________________________________________|\n5'-UUU...UUACG_________GC______________U____GAA_________AAACA...AAG-3'\n______________CUGCUGGUG__GGUGAU____CACC_GGUG___GGUC_CGCA\n______________|||||||:|__||||||____||||_::|:___:|||_|:||\n______________GACGACCGC__CCACUA____GUGG_UUAU___UCAG_GUGU\n3'-UUU...UAUUA_________________AAAU_________GAG____U____ACUAC...UAG-5'\n_____________|__________________________________________|\n_____________206________________________________________190\n |
242 -- 248 |
197 -- 203 |
-39.2862 kcal/mol |
16.885 kcal/mol |
15.3993 kcal/mol |
239 257@LB@ | |@LB@5'-UUU...UUACG GC U GAA AAACA...AAG-3'@LB@ CUGCUGGUG GGUGAU CACC GGUG GGUC CGCA@LB@ |||||||:| |||||| |||| ::|: :||| |:||@LB@ GACGACCGC CCACUA GUGG UUAU UCAG GUGU@LB@3'-UUU...UAUUA AAAU GAG U ACUAC...UAG-5'@LB@ | |@LB@ 206 190@LB@@LB@@LB@Energy -10.16 kcal/mol@LB@Hybridization Energy -39.2862 kcal/mol@LB@Unfolding Energy - mRNA 16.885 kcal/mol@LB@Unfolding Energy - sRNA 15.3993 kcal/mol@LB@@LB@Position - mRNA 240 -- 256@LB@Position - sRNA 191 -- 205@LB@Position Seed - mRNA 242 -- 248@LB@Position Seed - sRNA 197 -- 203@LB@ |
