116 |
0.003844 |
0.1165 |
b1004 |
wrbA |
-12.42 |
0.007537 |
123 -- 145 |
10 -- 35 |
NAD(P)H:quinone oxidoreductase |
|
_____________122________________________146\n_____________|__________________________|\n5'-UUA...UGCAC__________________________AAAUA...AAG-3'\n______________UCUGAAA___AGGACGUCUUAUCUUU\n______________|||||||___||:||:|||||:||:|\n______________AGACUUU___UCUUGUAGAAUGGAGA\n3'-AUU...UUUCC_______CUA________________CAUGG...AUG-5'\n_____________|__________________________|\n_____________36_________________________9\n |
133 -- 139 |
16 -- 22 |
-25.4666 kcal/mol |
4.32254 kcal/mol |
8.70229 kcal/mol |
122 146@LB@ | |@LB@5'-UUA...UGCAC AAAUA...AAG-3'@LB@ UCUGAAA AGGACGUCUUAUCUUU@LB@ ||||||| ||:||:|||||:||:|@LB@ AGACUUU UCUUGUAGAAUGGAGA@LB@3'-AUU...UUUCC CUA CAUGG...AUG-5'@LB@ | |@LB@ 36 9@LB@@LB@@LB@Energy -12.42 kcal/mol@LB@Hybridization Energy -25.4666 kcal/mol@LB@Unfolding Energy - mRNA 4.32254 kcal/mol@LB@Unfolding Energy - sRNA 8.70229 kcal/mol@LB@@LB@Position - mRNA 123 -- 145@LB@Position - sRNA 10 -- 35@LB@Position Seed - mRNA 133 -- 139@LB@Position Seed - sRNA 16 -- 22@LB@ |
118 |
0.003907 |
0.1165 |
b3827 |
yigM |
-8.32 |
0.129405 |
260 -- 268 |
1 -- 9 |
putative inner membrane EamA-like transporter |
|
_____________259_______269\n_____________|_________|\n5'-GGA...GGCGA_________GGGGC...UGG-3'\n______________GUACCUUGC\n______________|||||:|:|\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
262 -- 268 |
1 -- 7 |
-12.9582 kcal/mol |
2.53078 kcal/mol |
2.12872 kcal/mol |
259 269@LB@ | |@LB@5'-GGA...GGCGA GGGGC...UGG-3'@LB@ GUACCUUGC@LB@ |||||:|:|@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -8.32 kcal/mol@LB@Hybridization Energy -12.9582 kcal/mol@LB@Unfolding Energy - mRNA 2.53078 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 260 -- 268@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 262 -- 268@LB@Position Seed - sRNA 1 -- 7@LB@ |
119 |
0.003968 |
0.1172 |
b2765 |
queD |
-8.07 |
0.149030 |
164 -- 172 |
1 -- 9 |
6-pyruvoyl tetrahydrobiopterin synthase (PTPS) |
|
_____________163_______173\n_____________|_________|\n5'-AAC...UUCCG_________GGCGG...AUU-3'\n______________GUACUCUAC\n______________||||:||||\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
166 -- 172 |
1 -- 7 |
-12.1088 kcal/mol |
1.92954 kcal/mol |
2.12872 kcal/mol |
163 173@LB@ | |@LB@5'-AAC...UUCCG GGCGG...AUU-3'@LB@ GUACUCUAC@LB@ ||||:||||@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -8.07 kcal/mol@LB@Hybridization Energy -12.1088 kcal/mol@LB@Unfolding Energy - mRNA 1.92954 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 164 -- 172@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 166 -- 172@LB@Position Seed - sRNA 1 -- 7@LB@ |
120 |
0.003999 |
0.1172 |
b2582 |
trxC |
-9.28 |
0.072721 |
206 -- 219 |
4 -- 16 |
thioredoxin 2 |
|
_____________205____________220\n_____________|______________|\n5'-CUC...AUGAA____G_________AUUGU...UUG-3'\n______________UACC_UUUGUACCC\n______________||||_|:|||||||\n______________AUGG_AGACAUGGG\n3'-AUU...GUAGA______________AUG-5'\n_____________|______________|\n_____________17_____________3\n |
213 -- 219 |
4 -- 10 |
-18.1109 kcal/mol |
2.27225 kcal/mol |
6.59015 kcal/mol |
205 220@LB@ | |@LB@5'-CUC...AUGAA G AUUGU...UUG-3'@LB@ UACC UUUGUACCC@LB@ |||| |:|||||||@LB@ AUGG AGACAUGGG@LB@3'-AUU...GUAGA AUG-5'@LB@ | |@LB@ 17 3@LB@@LB@@LB@Energy -9.28 kcal/mol@LB@Hybridization Energy -18.1109 kcal/mol@LB@Unfolding Energy - mRNA 2.27225 kcal/mol@LB@Unfolding Energy - sRNA 6.59015 kcal/mol@LB@@LB@Position - mRNA 206 -- 219@LB@Position - sRNA 4 -- 16@LB@Position Seed - mRNA 213 -- 219@LB@Position Seed - sRNA 4 -- 10@LB@ |
121 |
0.004045 |
0.1176 |
b1738 |
chbB |
-6.64 |
0.311906 |
2 -- 15 |
34 -- 50 |
N N'-diacetylchitobiose-specific enzyme IIB component of PTS |
|
_____________1_________________16\n_____________|_________________|\n__________5'-A_________________AUAAC...CGG-3'\n______________AUGUGAAG___AGGGUC\n______________|:||||||___|:||||\n______________UGCACUUC___UUCCAG\n3'-AUU...GCUAA________AUU______ACUUU...AUG-5'\n_____________|_________________|\n_____________51________________33\n |
3 -- 9 |
43 -- 49 |
-17.276 kcal/mol |
2.8636 kcal/mol |
7.69543 kcal/mol |
1 16@LB@ | |@LB@ 5'-A AUAAC...CGG-3'@LB@ AUGUGAAG AGGGUC@LB@ |:|||||| |:||||@LB@ UGCACUUC UUCCAG@LB@3'-AUU...GCUAA AUU ACUUU...AUG-5'@LB@ | |@LB@ 51 33@LB@@LB@@LB@Energy -6.64 kcal/mol@LB@Hybridization Energy -17.276 kcal/mol@LB@Unfolding Energy - mRNA 2.8636 kcal/mol@LB@Unfolding Energy - sRNA 7.69543 kcal/mol@LB@@LB@Position - mRNA 2 -- 15@LB@Position - sRNA 34 -- 50@LB@Position Seed - mRNA 3 -- 9@LB@Position Seed - sRNA 43 -- 49@LB@ |
122 |
0.004081 |
0.1177 |
b3940 |
metL |
-10.48 |
0.032541 |
261 -- 280 |
41 -- 59 |
Bifunctional aspartokinase/homoserine dehydrogenase 2 |
|
_____________260__________________281\n_____________|____________________|\n5'-ACG...GCAGU_______CUG__________UUAUU...GCA-3'\n______________AGUCUGG___AUGUGAAGUG\n______________|:||:|:___|:|||||||:\n______________UUAGGCU___UGCACUUCAU\n3'-AUU...UCGGU_______AA___________UUUCC...AUG-5'\n_____________|____________________|\n_____________60___________________40\n |
274 -- 280 |
41 -- 47 |
-17.3741 kcal/mol |
3.59224 kcal/mol |
3.31634 kcal/mol |
260 281@LB@ | |@LB@5'-ACG...GCAGU CUG UUAUU...GCA-3'@LB@ AGUCUGG AUGUGAAGUG@LB@ |:||:|: |:|||||||:@LB@ UUAGGCU UGCACUUCAU@LB@3'-AUU...UCGGU AA UUUCC...AUG-5'@LB@ | |@LB@ 60 40@LB@@LB@@LB@Energy -10.48 kcal/mol@LB@Hybridization Energy -17.3741 kcal/mol@LB@Unfolding Energy - mRNA 3.59224 kcal/mol@LB@Unfolding Energy - sRNA 3.31634 kcal/mol@LB@@LB@Position - mRNA 261 -- 280@LB@Position - sRNA 41 -- 59@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 41 -- 47@LB@ |
123 |
0.004171 |
0.1178 |
b2989 |
yghU |
-8.31 |
0.130595 |
46 -- 54 |
49 -- 57 |
putative S-transferase |
|
_____________45________55\n_____________|_________|\n5'-UUA...UGUGC_________CUGCU...CGC-3'\n______________UCUGAUUAC\n______________||:||||||\n______________AGGCUAAUG\n3'-AUU...GGUUU_________CACUU...AUG-5'\n_____________|_________|\n_____________58________48\n |
48 -- 54 |
49 -- 55 |
-9.38135 kcal/mol |
0.766517 kcal/mol |
0.318327 kcal/mol |
45 55@LB@ | |@LB@5'-UUA...UGUGC CUGCU...CGC-3'@LB@ UCUGAUUAC@LB@ ||:||||||@LB@ AGGCUAAUG@LB@3'-AUU...GGUUU CACUU...AUG-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -8.31 kcal/mol@LB@Hybridization Energy -9.38135 kcal/mol@LB@Unfolding Energy - mRNA 0.766517 kcal/mol@LB@Unfolding Energy - sRNA 0.318327 kcal/mol@LB@@LB@Position - mRNA 46 -- 54@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 48 -- 54@LB@Position Seed - sRNA 49 -- 55@LB@ |
124 |
0.004173 |
0.1178 |
b0131 |
panD |
-9.38 |
0.067843 |
182 -- 197 |
22 -- 38 |
aspartate 1-decarboxylase |
|
_____________181_______________198\n_____________|_________________|\n5'-AUU...CGACA____A____________GUUAU...UUG-3'\n______________GGGU__GAAAGGUAGAA\n______________:|||__|||||:|||||\n______________UCCA__CUUUCUAUCUU\n3'-AUU...CAUUU____GA___________GUAGA...AUG-5'\n_____________|_________________|\n_____________39________________21\n |
191 -- 197 |
22 -- 28 |
-16.986 kcal/mol |
1.71047 kcal/mol |
5.81616 kcal/mol |
181 198@LB@ | |@LB@5'-AUU...CGACA A GUUAU...UUG-3'@LB@ GGGU GAAAGGUAGAA@LB@ :||| |||||:|||||@LB@ UCCA CUUUCUAUCUU@LB@3'-AUU...CAUUU GA GUAGA...AUG-5'@LB@ | |@LB@ 39 21@LB@@LB@@LB@Energy -9.38 kcal/mol@LB@Hybridization Energy -16.986 kcal/mol@LB@Unfolding Energy - mRNA 1.71047 kcal/mol@LB@Unfolding Energy - sRNA 5.81616 kcal/mol@LB@@LB@Position - mRNA 182 -- 197@LB@Position - sRNA 22 -- 38@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 22 -- 28@LB@ |
125 |
0.004186 |
0.1178 |
b0781 |
moaA |
-8.90 |
0.091954 |
79 -- 99 |
4 -- 23 |
molybdopterin biosynthesis protein A |
|
_____________78____________________100\n_____________|_____________________|\n5'-ACG...CACUA____C___A_______C____GGGUC...CGG-3'\n______________AACA_UCU_GCCUCUG_ACCU\n______________||||_|||_:||||||_|||:\n______________UUGU_AGA_UGGAGAC_UGGG\n3'-AUU...CUAUC________A_______A____AUG-5'\n_____________|_____________________|\n_____________24____________________3\n |
88 -- 94 |
9 -- 15 |
-21.7522 kcal/mol |
4.86496 kcal/mol |
8.01134 kcal/mol |
78 100@LB@ | |@LB@5'-ACG...CACUA C A C GGGUC...CGG-3'@LB@ AACA UCU GCCUCUG ACCU@LB@ |||| ||| :|||||| |||:@LB@ UUGU AGA UGGAGAC UGGG@LB@3'-AUU...CUAUC A A AUG-5'@LB@ | |@LB@ 24 3@LB@@LB@@LB@Energy -8.90 kcal/mol@LB@Hybridization Energy -21.7522 kcal/mol@LB@Unfolding Energy - mRNA 4.86496 kcal/mol@LB@Unfolding Energy - sRNA 8.01134 kcal/mol@LB@@LB@Position - mRNA 79 -- 99@LB@Position - sRNA 4 -- 23@LB@Position Seed - mRNA 88 -- 94@LB@Position Seed - sRNA 9 -- 15@LB@ |
126 |
0.00422 |
0.1178 |
b1621 |
malX |
-14.96 |
0.000732 |
43 -- 87 |
1 -- 56 |
maltose and glucose-specific PTS enzyme IIB component and IIC component |
|
_____________42__________________________________________________________88\n_____________|___________________________________________________________|\n5'-AUG...ACUCC____________C___________________A______________UAUU________ACCCG...GCA-3'\n______________CUGAUUAUGUGA_______________AGAUA_AACGUUUUACCUUU____UAUCUUAU\n______________|:|||||:||||_______________|||||_|||:|:||||||:|____||:|:||:\n______________GGCUAAUGCACU_______________UCUAU_UUGUAGAAUGGAGA____AUGGGAUG\n3'-AUU...GUUUA____________UCAUUUUCCAGACUU_____C______________C___________-5'\n_____________|__________________________________________________________|\n_____________57_________________________________________________________1\n |
81 -- 87 |
1 -- 7 |
-37.7188 kcal/mol |
10.08 kcal/mol |
12.7022 kcal/mol |
42 88@LB@ | |@LB@5'-AUG...ACUCC C A UAUU ACCCG...GCA-3'@LB@ CUGAUUAUGUGA AGAUA AACGUUUUACCUUU UAUCUUAU@LB@ |:|||||:|||| ||||| |||:|:||||||:| ||:|:||:@LB@ GGCUAAUGCACU UCUAU UUGUAGAAUGGAGA AUGGGAUG@LB@3'-AUU...GUUUA UCAUUUUCCAGACUU C C -5'@LB@ | |@LB@ 57 1@LB@@LB@@LB@Energy -14.96 kcal/mol@LB@Hybridization Energy -37.7188 kcal/mol@LB@Unfolding Energy - mRNA 10.08 kcal/mol@LB@Unfolding Energy - sRNA 12.7022 kcal/mol@LB@@LB@Position - mRNA 43 -- 87@LB@Position - sRNA 1 -- 56@LB@Position Seed - mRNA 81 -- 87@LB@Position Seed - sRNA 1 -- 7@LB@ |