104 |
0.01633 |
0.5059 |
b3057 |
bacA |
-10.04 |
0.095309 |
188 -- 194 |
54 -- 60 |
undecaprenyl pyrophosphate phosphatase |
|
_____________187_____195\n_____________|_______|\n5'-UUC...UAAUU_______UUAUU...UUG-3'\n______________UAGGGGU\n______________|||||||\n______________AUCCCCA\n3'-UUU...ACUUU_______UUUGU...UCG-5'\n_____________|_______|\n_____________61______53\n |
188 -- 194 |
54 -- 60 |
-11.2865 kcal/mol |
1.18126 kcal/mol |
0.0661814 kcal/mol |
187 195@LB@ | |@LB@5'-UUC...UAAUU UUAUU...UUG-3'@LB@ UAGGGGU@LB@ |||||||@LB@ AUCCCCA@LB@3'-UUU...ACUUU UUUGU...UCG-5'@LB@ | |@LB@ 61 53@LB@@LB@@LB@Energy -10.04 kcal/mol@LB@Hybridization Energy -11.2865 kcal/mol@LB@Unfolding Energy - mRNA 1.18126 kcal/mol@LB@Unfolding Energy - sRNA 0.0661814 kcal/mol@LB@@LB@Position - mRNA 188 -- 194@LB@Position - sRNA 54 -- 60@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 54 -- 60@LB@ |
105 |
0.01645 |
0.5059 |
b0454 |
ybaZ |
-8.45 |
0.190978 |
84 -- 93 |
47 -- 56 |
excision repair protein alkyltransferase-like protein ATL |
|
_____________83_________94\n_____________|__________|\n5'-AGG...GACCU__________GUAGC...UUC-3'\n______________GGUAAACAGA\n______________||||||||||\n______________CCAUUUGUCU\n3'-UUU...UAUCC__________GUAAG...UCG-5'\n_____________|__________|\n_____________57_________46\n |
87 -- 93 |
47 -- 53 |
-13.2019 kcal/mol |
2.68818 kcal/mol |
2.06629 kcal/mol |
83 94@LB@ | |@LB@5'-AGG...GACCU GUAGC...UUC-3'@LB@ GGUAAACAGA@LB@ ||||||||||@LB@ CCAUUUGUCU@LB@3'-UUU...UAUCC GUAAG...UCG-5'@LB@ | |@LB@ 57 46@LB@@LB@@LB@Energy -8.45 kcal/mol@LB@Hybridization Energy -13.2019 kcal/mol@LB@Unfolding Energy - mRNA 2.68818 kcal/mol@LB@Unfolding Energy - sRNA 2.06629 kcal/mol@LB@@LB@Position - mRNA 84 -- 93@LB@Position - sRNA 47 -- 56@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 47 -- 53@LB@ |
106 |
0.01645 |
0.5059 |
b2416 |
ptsI |
-13.93 |
0.013056 |
96 -- 143 |
1 -- 59 |
PEP-protein phosphotransferase of PTS system (enzyme I) |
|
_____________95__________________________________________________________144\n_____________|___________________________________________________________|\n5'-GUG...GCAGA___CGA_________AG_________________UGAACAUCU______AC________GGAAC...CCG-3'\n______________AGG_______AGACG__CAGAAA______GCGGU_________GGUUAA___UGAUGGC\n______________|||_______||||:__||||||______:||||_________:|||||___||||:||\n______________UCC_______UCUGU__GUCUUU______UGCCA_________UCAAUU___ACUAUCG\n3'-UUU...CUUUA___CCAUUUG_____AA______ACUUAC_____UUAUUUAUU______ACU_______-5'\n_____________|__________________________________________________________|\n_____________60_________________________________________________________1\n |
137 -- 143 |
1 -- 7 |
-30.8595 kcal/mol |
10.5928 kcal/mol |
6.33764 kcal/mol |
95 144@LB@ | |@LB@5'-GUG...GCAGA CGA AG UGAACAUCU AC GGAAC...CCG-3'@LB@ AGG AGACG CAGAAA GCGGU GGUUAA UGAUGGC@LB@ ||| ||||: |||||| :|||| :||||| ||||:||@LB@ UCC UCUGU GUCUUU UGCCA UCAAUU ACUAUCG@LB@3'-UUU...CUUUA CCAUUUG AA ACUUAC UUAUUUAUU ACU -5'@LB@ | |@LB@ 60 1@LB@@LB@@LB@Energy -13.93 kcal/mol@LB@Hybridization Energy -30.8595 kcal/mol@LB@Unfolding Energy - mRNA 10.5928 kcal/mol@LB@Unfolding Energy - sRNA 6.33764 kcal/mol@LB@@LB@Position - mRNA 96 -- 143@LB@Position - sRNA 1 -- 59@LB@Position Seed - mRNA 137 -- 143@LB@Position Seed - sRNA 1 -- 7@LB@ |
107 |
0.01649 |
0.5059 |
b0830 |
gsiB |
-12.67 |
0.025954 |
282 -- 298 |
1 -- 18 |
glutathione ABC transporter periplasmic binding protein |
|
_____________281________________299\n_____________|__________________|\n5'-GGC...CUGCC____AU____________GG-3'\n______________AAAG___GUGGUGGUGGC\n______________||||___:||:||:|:||\n______________UUUC___UACUACUAUCG\n3'-UUU...AUUUA____AAU___________-5'\n_____________|_________________|\n_____________19________________1\n |
292 -- 298 |
1 -- 7 |
-15.5562 kcal/mol |
2.82856 kcal/mol |
0.0611543 kcal/mol |
281 299@LB@ | |@LB@5'-GGC...CUGCC AU GG-3'@LB@ AAAG GUGGUGGUGGC@LB@ |||| :||:||:|:||@LB@ UUUC UACUACUAUCG@LB@3'-UUU...AUUUA AAU -5'@LB@ | |@LB@ 19 1@LB@@LB@@LB@Energy -12.67 kcal/mol@LB@Hybridization Energy -15.5562 kcal/mol@LB@Unfolding Energy - mRNA 2.82856 kcal/mol@LB@Unfolding Energy - sRNA 0.0611543 kcal/mol@LB@@LB@Position - mRNA 282 -- 298@LB@Position - sRNA 1 -- 18@LB@Position Seed - mRNA 292 -- 298@LB@Position Seed - sRNA 1 -- 7@LB@ |
108 |
0.01698 |
0.5123 |
b0078 |
ilvH |
-10.97 |
0.061484 |
141 -- 180 |
1 -- 51 |
acetolactate synthase 3 small subunit valine-sensitive |
|
_____________140_________________________________________________181\n_____________|___________________________________________________|\n5'-GCC...CCGAU______UCG___________________________AU_______UA____AAAAC...UGA-3'\n______________GCAGAU___CGGG_______GGCGG_AAUGGAUGAA____GUGGU___AGC\n______________:||||:___|:|:_______|:|||_|||::||:||____:||:|___|||\n______________UGUCUG___GUCU_______CUGCC_UUAUUUAUUU____UACUA___UCG\n3'-UUU...CCAUU______UAA____UUACUUA_____A__________CAAU_____CUA___-5'\n_____________|__________________________________________________|\n_____________52_________________________________________________1\n |
162 -- 168 |
16 -- 22 |
-27.7823 kcal/mol |
10.4814 kcal/mol |
6.33528 kcal/mol |
140 181@LB@ | |@LB@5'-GCC...CCGAU UCG AU UA AAAAC...UGA-3'@LB@ GCAGAU CGGG GGCGG AAUGGAUGAA GUGGU AGC@LB@ :||||: |:|: |:||| |||::||:|| :||:| |||@LB@ UGUCUG GUCU CUGCC UUAUUUAUUU UACUA UCG@LB@3'-UUU...CCAUU UAA UUACUUA A CAAU CUA -5'@LB@ | |@LB@ 52 1@LB@@LB@@LB@Energy -10.97 kcal/mol@LB@Hybridization Energy -27.7823 kcal/mol@LB@Unfolding Energy - mRNA 10.4814 kcal/mol@LB@Unfolding Energy - sRNA 6.33528 kcal/mol@LB@@LB@Position - mRNA 141 -- 180@LB@Position - sRNA 1 -- 51@LB@Position Seed - mRNA 162 -- 168@LB@Position Seed - sRNA 16 -- 22@LB@ |
109 |
0.01701 |
0.5123 |
b2075 |
mdtB |
-10.10 |
0.092694 |
6 -- 26 |
38 -- 56 |
multidrug efflux system subunit B |
|
_____________5_____________________27\n_____________|_____________________|\n______5'-CAUCU_____CGC_____________CAGUC...CCG-3'\n______________GGUGA___CGGGCAUUCAGGA\n______________|||:|___|:|:|||||||:|\n______________CCAUU___GUCUGUAAGUCUU\n3'-UUU...UAUCC_____U_______________UACUU...UCG-5'\n_____________|_____________________|\n_____________57____________________37\n |
18 -- 24 |
40 -- 46 |
-22.2525 kcal/mol |
5.90254 kcal/mol |
6.25055 kcal/mol |
5 27@LB@ | |@LB@ 5'-CAUCU CGC CAGUC...CCG-3'@LB@ GGUGA CGGGCAUUCAGGA@LB@ |||:| |:|:|||||||:|@LB@ CCAUU GUCUGUAAGUCUU@LB@3'-UUU...UAUCC U UACUU...UCG-5'@LB@ | |@LB@ 57 37@LB@@LB@@LB@Energy -10.10 kcal/mol@LB@Hybridization Energy -22.2525 kcal/mol@LB@Unfolding Energy - mRNA 5.90254 kcal/mol@LB@Unfolding Energy - sRNA 6.25055 kcal/mol@LB@@LB@Position - mRNA 6 -- 26@LB@Position - sRNA 38 -- 56@LB@Position Seed - mRNA 18 -- 24@LB@Position Seed - sRNA 40 -- 46@LB@ |
110 |
0.01732 |
0.5155 |
b1800 |
dmlA |
-11.31 |
0.051964 |
127 -- 183 |
1 -- 58 |
D-malate oxidase NAD-dependent; putative tartrate dehydrogenase |
|
_____________126___________________________________________________________184\n_____________|_____________________________________________________________|\n5'-GGU...GUUAC____AUU___UCCUU_____UCAAUUAUAG__________UU______C___UU_______CAGGA...GCU-3'\n______________GGGG___AAU_____UUCAG__________GAUGGUGAUG______GU_AAU__UGAUGGU\n______________||||___||:_____|||||__________||:|||:||:______||_|||__||||:|:\n______________CCCC___UUG_____AAGUC__________CUGCCAUUAU______CA_UUA__ACUAUCG\n3'-UUU...UUUAU____AU____UCUGU_____UUUACUUA____________UUAUUU__A___CU_______-5'\n_____________|____________________________________________________________|\n_____________59___________________________________________________________1\n |
177 -- 183 |
1 -- 7 |
-30.6237 kcal/mol |
12.9772 kcal/mol |
6.33758 kcal/mol |
126 184@LB@ | |@LB@5'-GGU...GUUAC AUU UCCUU UCAAUUAUAG UU C UU CAGGA...GCU-3'@LB@ GGGG AAU UUCAG GAUGGUGAUG GU AAU UGAUGGU@LB@ |||| ||: ||||| ||:|||:||: || ||| ||||:|:@LB@ CCCC UUG AAGUC CUGCCAUUAU CA UUA ACUAUCG@LB@3'-UUU...UUUAU AU UCUGU UUUACUUA UUAUUU A CU -5'@LB@ | |@LB@ 59 1@LB@@LB@@LB@Energy -11.31 kcal/mol@LB@Hybridization Energy -30.6237 kcal/mol@LB@Unfolding Energy - mRNA 12.9772 kcal/mol@LB@Unfolding Energy - sRNA 6.33758 kcal/mol@LB@@LB@Position - mRNA 127 -- 183@LB@Position - sRNA 1 -- 58@LB@Position Seed - mRNA 177 -- 183@LB@Position Seed - sRNA 1 -- 7@LB@ |
111 |
0.01748 |
0.5155 |
b4012 |
yjaB |
-9.42 |
0.126217 |
155 -- 212 |
1 -- 59 |
GNAT-family putative N-acetyltransferase; acetyl coenzyme A-binding protein |
|
_____________154_____________________________________________________________213\n_____________|_______________________________________________________________|\n5'-AAG...UUUCA___AAA____U___________UAUAA____________A________AA______UAU____AUUCG...CAG-3'\n______________AGG___AGAC__ACG_UUAGAA_____GAAUGAC__UAA_AGG_AGAG__AAUGGU___UAGU\n______________|||___|:||__||:_|:||||_____|||||||__|||_|::_|:||__||||:|___|||:\n______________UCC___UUUG__UGU_AGUCUU_____CUUACUG__AUU_UUU_UUUC__UUACUA___AUCG\n3'-UUU...CUUUA___CCA____UC___A______UA__________CC___A___A____AA______CU_____-5'\n_____________|______________________________________________________________|\n_____________60_____________________________________________________________1\n |
180 -- 186 |
29 -- 35 |
-23.4815 kcal/mol |
7.7268 kcal/mol |
6.33764 kcal/mol |
154 213@LB@ | |@LB@5'-AAG...UUUCA AAA U UAUAA A AA UAU AUUCG...CAG-3'@LB@ AGG AGAC ACG UUAGAA GAAUGAC UAA AGG AGAG AAUGGU UAGU@LB@ ||| |:|| ||: |:|||| ||||||| ||| |:: |:|| ||||:| |||:@LB@ UCC UUUG UGU AGUCUU CUUACUG AUU UUU UUUC UUACUA AUCG@LB@3'-UUU...CUUUA CCA UC A UA CC A A AA CU -5'@LB@ | |@LB@ 60 1@LB@@LB@@LB@Energy -9.42 kcal/mol@LB@Hybridization Energy -23.4815 kcal/mol@LB@Unfolding Energy - mRNA 7.7268 kcal/mol@LB@Unfolding Energy - sRNA 6.33764 kcal/mol@LB@@LB@Position - mRNA 155 -- 212@LB@Position - sRNA 1 -- 59@LB@Position Seed - mRNA 180 -- 186@LB@Position Seed - sRNA 29 -- 35@LB@ |
112 |
0.01793 |
0.5155 |
b1418 |
cybB |
-10.08 |
0.093429 |
125 -- 145 |
33 -- 57 |
cytochrome b561 |
|
_____________124_______________________146\n_____________|_________________________|\n5'-AAC...AAAAC_________________________AUUUU...UCC-3'\n______________GGGUGAACA_AUAUUU___AAUGAA\n______________||||:||||_|:|||:___||||||\n______________CCCAUUUGU_UGUAAG___UUACUU\n3'-UUU...UUAUC_________C______UCU______ACUGC...UCG-5'\n_____________|_________________________|\n_____________58________________________32\n |
127 -- 133 |
49 -- 55 |
-19.5073 kcal/mol |
3.1607 kcal/mol |
6.2643 kcal/mol |
124 146@LB@ | |@LB@5'-AAC...AAAAC AUUUU...UCC-3'@LB@ GGGUGAACA AUAUUU AAUGAA@LB@ ||||:|||| |:|||: ||||||@LB@ CCCAUUUGU UGUAAG UUACUU@LB@3'-UUU...UUAUC C UCU ACUGC...UCG-5'@LB@ | |@LB@ 58 32@LB@@LB@@LB@Energy -10.08 kcal/mol@LB@Hybridization Energy -19.5073 kcal/mol@LB@Unfolding Energy - mRNA 3.1607 kcal/mol@LB@Unfolding Energy - sRNA 6.2643 kcal/mol@LB@@LB@Position - mRNA 125 -- 145@LB@Position - sRNA 33 -- 57@LB@Position Seed - mRNA 127 -- 133@LB@Position Seed - sRNA 49 -- 55@LB@ |
113 |
0.01802 |
0.5155 |
b3910 |
yiiM |
-13.90 |
0.013248 |
191 -- 239 |
40 -- 92 |
6-N-hydroxylaminopurine resistance protein |
|
_____________190______________________________________________________240\n_____________|________________________________________________________|\n5'-UAA...GUGGA________A_____________________U_________C_______AGA_____GCUUA...UGC-3'\n______________GAGGGAAC__GAUGCGA__UAUCCGGUUGA_GUA____UA_ACAGGCA___UUCAG\n______________:|:::|||__:||||||__:||||||||||_:||____||_||||:||___|||||\n______________UUUUUUUG__UUACGCU__GUAGGCCAACU_UAU____AU_UGUCUGU___AAGUC\n__________3'-U________GC_______CC___________U___CCCC__U_______________UUUAC...UCG-5'\n_____________|________________________________________________________|\n_____________93_______________________________________________________39\n |
225 -- 231 |
45 -- 51 |
-43.4237 kcal/mol |
10.1845 kcal/mol |
19.3361 kcal/mol |
190 240@LB@ | |@LB@5'-UAA...GUGGA A U C AGA GCUUA...UGC-3'@LB@ GAGGGAAC GAUGCGA UAUCCGGUUGA GUA UA ACAGGCA UUCAG@LB@ :|:::||| :|||||| :|||||||||| :|| || ||||:|| |||||@LB@ UUUUUUUG UUACGCU GUAGGCCAACU UAU AU UGUCUGU AAGUC@LB@ 3'-U GC CC U CCCC U UUUAC...UCG-5'@LB@ | |@LB@ 93 39@LB@@LB@@LB@Energy -13.90 kcal/mol@LB@Hybridization Energy -43.4237 kcal/mol@LB@Unfolding Energy - mRNA 10.1845 kcal/mol@LB@Unfolding Energy - sRNA 19.3361 kcal/mol@LB@@LB@Position - mRNA 191 -- 239@LB@Position - sRNA 40 -- 92@LB@Position Seed - mRNA 225 -- 231@LB@Position Seed - sRNA 45 -- 51@LB@ |