STM1107 |
4 |
61 |
6 |
12 |
17.59 |
GcvB |
36 |
82 |
74 |
80 |
10.87 |
-20.55 |
-49.01 |
-1.99245 |
AGCGACACAUCAUCUGCACUUCCGGAAAGCCCCGAGUCUGUCAGUUCGCACAACGCGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUU |
(((((((((.((((...((..(((..(((((...((((((((((.......(((((((&)))))))))))))))))...))))).)))..)))))).))))))))) |
UUAAGCCUGGCCCCGUAAGCGCAGCGCUACCGGGCAACCGUAGUACCCUACAAAAUUCCCAUCAGAGGAAAAAAAAUGAGCGACACAUCAUCUGCACUUCCGGAAAGCCCCGAGUCUGUCAGUUCGCACAACGCGCUCAGCACGGGUCAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0001353 |
0.2036716 |
hpaX |
1252625 |
4-hydroxyphenylacetate permease |
STM0634 |
20 |
62 |
49 |
55 |
5.65 |
GcvB |
35 |
77 |
39 |
45 |
11 |
-16.39 |
-33.04 |
-1.58911 |
CAGAAAGACAACCGGCCGAUCAACACCUACAGGACAAACCGCA&UGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUG |
((.((..((((((((((((......(((((((((((...((((&))))))))))).))))...)))))...)))))))....)).)) |
UUAAAACCAACCCAUAAAUGCAAAAUAUACUAUUUCAUCUAUUAUUCAUAAUACGAAUGAAUUCGGAGCCAGAGCGUGAGUGAUAAUAAUCAGGCAGAAAGACAACCGGCCGAUCAACACCUACAGGACAAACCGCAAAUUUUCAGAACA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0038311 |
0.6975035 |
ybeF |
1252154 |
putative LysR family transcriptional regulator |
STM3495 |
52 |
64 |
57 |
63 |
3.25 |
GcvB |
181 |
193 |
182 |
188 |
2.72 |
-16.35 |
-22.32 |
-1.58523 |
GCAAUAUGGCGGU&ACCGCCAUAUUGC |
(((((((((((((&))))))))))))) |
GCCAACCACAGAAAAAUGUUUAUUGGACAGGGUGCGACUGACCACGCCUGACAGACUUAGUAAGAUGGGGAAAGCAUGAGCACCAUUCUGAUUUUUAUAGCUGCUUUGCUGGCCUGCUCUCUACUGGCAAUAUGGCGGUUCCGGGUAAAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0039371 |
0.6975035 |
yrfF |
1255018 |
Intracellular growth attenuator protein igaA |
STM3021 |
29 |
67 |
43 |
49 |
10.69 |
GcvB |
50 |
91 |
72 |
78 |
10.46 |
-14.5 |
-35.65 |
-1.40586 |
UGCAACAUGACGCCAUACAACGUCGCUCGCUGCCGGAGC&GCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
(((((((((((...((((((((((((.((..((((((((&)).))))))...))...)))))))))))).))))))).)))) |
ACCUAUCUACUUUAUCGAUGGAUGUUAUCUUUUAGGUAUCACAUUAAACGAUAAAAUAGCGGAAAUUUCUUUAGCUUGAUUAAGAGUAAGGUUUUUUCGUUUAUGCAACAUGACGCCAUACAACGUCGCUCGCUGCCGGAGCGUAUUUUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0128866 |
0.7904009 |
|
1254544 |
putative inner membrane protein |
STM0369 |
2 |
69 |
8 |
14 |
12.59 |
GcvB |
31 |
91 |
80 |
86 |
17.22 |
-18.82 |
-48.63 |
-1.82471 |
UGACAGACACGACGAUCCUGCAAAACAACACGCAUGUCAUUAAGCCUAAAAAAUCGGUCGCGCUUUCC&GGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
((.((((((((((((.....((..(((((.((...((((..(((((((.....((((.((((..((((&))))..))))..))))))))))).))))...)))))))..)).....)))))))))))))) |
CACUACGUUUAACCCGCCUACGGUACGGCCUACACGCCUCAAUACCCUACACAUUACAAUAAUGACGAGGACAAUAUGACAGACACGACGAUCCUGCAAAACAACACGCAUGUCAUUAAGCCUAAAAAAUCGGUCGCGCUUUCCGGCGUA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0006231 |
0.3847632 |
prpC |
1251888 |
2-methylcitrate synthase |
STM1822 |
43 |
69 |
62 |
68 |
6.4 |
GcvB |
162 |
185 |
163 |
169 |
6.16 |
-14.36 |
-26.92 |
-1.39229 |
GUGGUGAUCUACAAUAAUACGCUGUGG&CCAUAGUGAUUAAUGUAGCACCGC |
((((((..(((((.((((.((((((((&)))))))))))).))))))))))) |
GUUACAGAGGUGACGGCGGCGCCACAUUGUGGCAGUCUUGAACCAUUCAAAUGAAAAGCAAAUGAGGAAUAAGUAAUGUCUAUCGUGCGUAUUGAUGCCGAAGAUCGUUGGUCAGACGUGGUGAUCUACAAUAAUACGCUGUGGUAUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0140165 |
0.7904009 |
yoaB |
1253341 |
similar to E. coli orf hypothetical protein (AAC74879.1) Blastp hit to AAC74879.1 (130 aa) 92% identity in aa 17 - 130 |
STM1033 |
42 |
70 |
60 |
66 |
5.67 |
GcvB |
132 |
162 |
137 |
143 |
7.38 |
-15.02 |
-28.07 |
-1.45628 |
GACAGCAGGGAACGGACGCGGGGAGGGAA&UUUCACUUCCUGUACAUUUACCCUGUCUGUC |
((((((((((........(((((((((((&)))).)))))))........))))).))))) |
ACGAAAACCGUAAGCUGGGACUGGUAUUUGAUACUGAUCCGGCACAUGACCCGGGGGAACAGGAUAAUGCCGGAAGUGAAGACAACAGUGGCGGCGAUAAAAAUGCCGCCGGUGAUGACAGCAGGGAACGGACGCGGGGAGGGAAGCAGU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0093682 |
0.7883581 |
|
1252551 |
Gifsy-2 prophage Clp protease-like protein |
STM1282 |
56 |
70 |
64 |
70 |
2.38 |
GcvB |
36 |
50 |
36 |
42 |
5.56 |
-14.86 |
-22.8 |
-1.44077 |
CCCAGGAGAACGCGC&GCGUGUUCUGAUGGG |
((((..(((((((((&)))))))))..)))) |
AACAAAAACAACAUCGUUCAUCAUAGUGCUUCGCAGUAAAUGUUCAUAUUGCACCAGGAGUGAGAAAUGGCCGAAAUGACUGAAGUCGCGAAGGGUGUCGCUACACACCAACGUUUAGUGGCUUUAUUAACCCAGGAGAACGCGCGCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0103458 |
0.7883581 |
yeaK |
1252800 |
putative cytoplasmic protein |
STM3680 |
58 |
70 |
64 |
70 |
0.52 |
GcvB |
48 |
60 |
48 |
54 |
4.2 |
-14.26 |
-18.98 |
-1.38259 |
AAGUUAAAAGCCC&GGGCUUUUGGCUU |
(((((((((((((&))))))))))))) |
AGCGGGAAAUCAUUGGCGAAAAAUUCACCAGCACCGUCUACCCUUGUGGAGUACCUUUACAAUAAGGAGUUGGUCAUGACGAACAAUCCCCCUUCAACACGUAUUCAGCCAGGUGAAUACGGGUACCCACUGAAGUUAAAAGCCCGCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0148769 |
0.7904009 |
aldB |
1255204 |
aldehyde dehydrogenase |
PSLT042 |
2 |
70 |
53 |
59 |
9.48 |
GcvB |
37 |
91 |
47 |
53 |
14.15 |
-14.17 |
-37.8 |
-1.37387 |
UGCCGAUCAUAGCAGCAAUUCCUGAUGAAGAACGACAACUGAUGCGCAAAGAGGCCCAACAAACCCACG&CGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
((.(((.(((((((((........((((......(((((((....((..(((((((((.((....((((&))))...)).))))))))).))...)))))))....))))))))))))).))))) |
CUGAAAGGGAACUCAGCCCGGAUUGUGCGAUCUGAUCAAUCGCCAAACAUCACAAAUCACCAACCGGACUGAGCGAUGCCGAUCAUAGCAGCAAUUCCUGAUGAAGAACGACAACUGAUGCGCAAAGAGGCCCAACAAACCCACGAUAAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0156913 |
0.7979576 |
|
1256195 |
putative integrase protein |