STM0900 |
-48 |
-8 |
-15 |
-9 |
13.44 |
GcvB |
36 |
81 |
37 |
43 |
10.87 |
-14.38 |
-38.69 |
-1.39423 |
ACAAUGCUGACCAUCACGCCAAAUUUUGCCCAGGAACGCGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
(((((((....((((((((((((....(((((.((((((((&))))))))...))))).))))))........))))))..))))))) |
UCAUUAUCGCAUCGAUAUGGGGGCUGGACAAUGCUGACCAUCACGCCAAAUUUUGCCCAGGAACGCGCGCUGAACAUGCUGCGCCGCGACUGGAAGUCGCAUAAUACUUUUAUGGUGUAUGCACCCACUGGCAGCGGCAAAACGGGGUUA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0138499 |
0.7904009 |
|
1252419 |
putative Fels-1 prophage DNA or RNA helicases of superfamily II |
STM0330 |
-25 |
-8 |
-14 |
-8 |
4.13 |
GcvB |
152 |
170 |
152 |
158 |
2.51 |
-14.16 |
-20.8 |
-1.3729 |
UCAUUACUUCAGGCAGGG&CCCUGUCUGUCCAUAGUGA |
((((((...(((((((((&)))))))))....)))))) |
CGGCGAUGGUUGCGGCGGCGGCGGUAGCGGGGCAUCUGGUCGAUGUUCGGUCAUUACUUCAGGCAGGGGAAUAAGAUGGAUACGUUUAAGCAAAUCAGCGGGCGAAUUGCGCCGAUGCUGGAACCGAAUAUCGACACUGAUGUGAUUAUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0157842 |
0.7979576 |
|
1251849 |
3-isopropylmalate dehydratase small subunit |
STM3083 |
-36 |
-6 |
-13 |
-7 |
4.19 |
GcvB |
130 |
160 |
131 |
137 |
6.26 |
-15.04 |
-25.49 |
-1.45822 |
CAGAAUUGGUAAACAAAACAGGAGUGGGAAA&UUUUUCACUUCCUGUACAUUUACCCUGUCUG |
((((...((((((....((((((((((((((&)))))))).))))))...))))))...)))) |
AGUGUGAUCAUAUUCACGGAUUUUGGUAUGGUGUUUAAGCAGAAUUGGUAAACAAAACAGGAGUGGGAAAAAUUCAUGGACACCAUAGCUCGCCAGUUAGACGCCGCAAGGCACCAAUUCAAAACGACUUAUUCACGUCAGGGAAUGGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.009252 |
0.7883581 |
|
1254606 |
fructuronate reductase |
STM3984 |
-15 |
-3 |
-10 |
-4 |
0.93 |
GcvB |
148 |
161 |
149 |
155 |
1.2 |
-14.06 |
-16.19 |
-1.3632 |
ACAGAAGGGUAAA&UUUACCCUGUCUGU |
(((((((((((((&)))))))).))))) |
GGCAGAGAUCACGCUCUCGUGGGGCGAUGUGCUAAGAUGCGGGAACUUGAGGUCAAAAAAACAGAAGGGUAAAAAAUGGAAUCACUGGCCGCGCUCUAUAAAAAUCAUAUUGUUACCUUACAAGAACGGACGCGCGAUGUUCUGGCGCGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0167404 |
0.8089837 |
pepQ |
1255510 |
Xaa-Pro dipeptidase |
STM3630 |
-43 |
-2 |
-21 |
-15 |
6.19 |
GcvB |
51 |
92 |
66 |
72 |
10.1 |
-20.93 |
-37.22 |
-2.02929 |
UUGCAAAGGGCAAAACAACAUACAUCACAAUUGGAGCAGAAG&CUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAA |
(((((((...((.((((((((((((((((((((.((((((((&)))))).))..))))))))))).))))))))).))))))))) |
AAAAAACAAAAAAGGCCGGGCGGUAAAAGCCUUUGCAAAGGGCAAAACAACAUACAUCACAAUUGGAGCAGAAGAAUGAGUAUUUCCUUGAAGAAGUCAGGGAUGCUGAAGCUUGGUUUGAGCCUGGUGGCCAUGACCGUUGCAGCAAGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
9.35e-05 |
0.2036716 |
dppA |
1255154 |
ABC transporter substrate-binding protein |
STM1787 |
-64 |
2 |
-37 |
-31 |
11.4 |
GcvB |
34 |
90 |
54 |
60 |
15.42 |
-16.39 |
-43.21 |
-1.58911 |
GUAAACGCCACAAACAACAGUUAGCGCAAGCCGAACAACAGCCGGACAAUGAGGAUAAACAGGCAU&AUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGC |
((((((((.((((((((((.....((.((((((((....((((.....((.((....((((.((((&)))).)))))).)).)))))))))))).)).......)))))).)))).)))))))) |
GCUCAACCAACGUAAACGCCACAAACAACAGUUAGCGCAAGCCGAACAACAGCCGGACAAUGAGGAUAAACAGGCAUGAGUAACCAGUAUCAAACCCAGGGUUAUACCGUUAACGACGCCGGCCGUCGUCUGAUCGUGGACCCGAUUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0038311 |
0.6975035 |
|
1253306 |
[Ni/Fe] hydrogenase large subunit |
STM4398 |
-30 |
6 |
-22 |
-16 |
2.15 |
GcvB |
125 |
169 |
153 |
159 |
9.4 |
-19.27 |
-30.82 |
-1.86835 |
CACAACACAGACAGGUACAGGAAGAAAAACAUGGUA&UACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUG |
(((...(((((((((((((((((((((((...((((&)))).))))))..)))))))).......))))))))).....))) |
UGAUAACAGGAUCGUCGUAUCAUAGACCAAAGGCCGUAGAGCCCGCACAACACAGACAGGUACAGGAAGAAAAACAUGGUAGAUCAGGUAAAAGUCGCAGCCGACGAACAGGCUCCGGCUGAACAGUCGCUACGGCGCAAUCUUACAAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.000428 |
0.3847632 |
cycA |
1255924 |
D-serine/D-alanine/glycine transporter |
STM0532 |
-28 |
7 |
-7 |
-1 |
2.42 |
GcvB |
131 |
164 |
138 |
144 |
7.56 |
-14.18 |
-24.16 |
-1.37484 |
UGGACAACAAAUAGUAAAAGGAUAGGGAAUGAAAA&UUUUCACUUCCUGUACAUUUACCCUGUCUGUCCA |
(((((((((....(((((...(((((((.((((((&)))))).)))))))...)))))..))).)))))) |
GCGCUGGGGCACACCUCUGGUGCGGAUACGCUGCUGGGGUUCUGGCUUGGACAACAAAUAGUAAAAGGAUAGGGAAUGAAAACGUUGGUAGUUGCUCUUGGCGGCAACGCAUUAUUGCAGCGCGGAGAAGCGCUAACGGCAGAGAAUCAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0155989 |
0.7979576 |
arcC |
1252052 |
putative carbamate kinase |
STM2189 |
-6 |
10 |
2 |
8 |
3.03 |
GcvB |
155 |
171 |
158 |
164 |
2.56 |
-15.31 |
-20.9 |
-1.4844 |
AUCAUUAUGGGCAGCA&UGUCUGUCCAUAGUGAU |
((((((((((((((((&)).)))))))))))))) |
CGCAGACCGGAUAACGUAUUUCUUUUGCCAUCCGGCGCGGAUAGUCAUAAUUAAAAAGGCCGACAGGGUAUCAUUAUGGGCAGCACGAUUUCUCCGCCGUCGGGUGAAUAUUUGUUGGAAAUGCGUGGCAUUAACAAAUCAUUUCCCGGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0078051 |
0.7711365 |
mglA |
1253711 |
galactose/methyl galactoside ABC transporter ATP-binding protein MglA |
STM1789 |
-10 |
11 |
5 |
11 |
3.84 |
GcvB |
35 |
55 |
35 |
41 |
5.74 |
-17.32 |
-26.9 |
-1.67928 |
AGGAGCCCUCAUGAAUGCGCA&UGCGUGUUCUGAUGGGCUUUU |
(((((((((((.(((((((((&)))))))))))).)))))))) |
CGAUACGGUGAUCUCCACCAUGAUCAAUGGCUAUCGCAGCCAUAAAUUCCCCAAACCGCACGACAAGGAGCCCUCAUGAAUGCGCAACGCGUAGUGGUGAUGGGGUUAGGAAACCUGCUGUGGGCCGAUGAAGGAUUCGGUAUCCGGGUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0019866 |
0.598099 |
|
1253308 |
hydrogenase expression/formation protein |