STM3236 |
25 |
40 |
34 |
40 |
5.36 |
GcvB |
154 |
169 |
154 |
160 |
2.34 |
-15.54 |
-23.24 |
-1.5067 |
CAAUGUGGACAGGCAG&CUGUCUGUCCAUAGUG |
((.(((((((((((((&))))))))))))).)) |
CCGGGCAGAAUAUCUGGCUAACAAUGCAGCGUCCAGCCCCUUAACAUAAAAGGAAGUAAAGAGAGGUUAAUAACGAUGAUUACGACCCGAACCGCCAAACAAUGUGGACAGGCAGACUACGGAUGGCUACAGGCCCGCUAUACCUUCUCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0067362 |
0.7419678 |
yhaK |
1254759 |
similar to E. coli orf hypothetical protein (AAC76141.1) Blastp hit to AAC76141.1 (233 aa) 84% identity in aa 1 - 233 |
STM0516 |
31 |
40 |
32 |
38 |
3.24 |
GcvB |
154 |
163 |
156 |
162 |
1.28 |
-14.42 |
-18.94 |
-1.39811 |
GGACAGGCAG&CUGUCUGUCC |
((((((((((&)))))))))) |
UAUUGGCCUUCUUGCAUAAGAUGAACAUAUUGUUCAUUGUUUAUGCUCAUAUUUUGGGCCGGAGUUAACGUAAAUAUGACGGAAGUAAGACGACGCGGCAGGCCAGGACAGGCAGAGCCGACUGCGCAGAAAGGCGCUCAGGCGCUGGAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0135219 |
0.7904009 |
allR |
1252036 |
transcriptional regulator |
STM1057 |
1 |
43 |
4 |
10 |
7.59 |
GcvB |
37 |
81 |
72 |
78 |
10.7 |
-14.2 |
-32.49 |
-1.37678 |
AUGACACAACAGCCACAAGCCAAAUACCGCCAUGACUAUCGCG&CGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
(((((((((((..(((((((((((.....((((......((((&)))).....))))...)))))))......)))).))))))))))) |
AUUCUGCGUAGCGCGAUUUGCGCAACAGGAAUAGACUGGAGUCGACACUCUACACAAAGAUGCGAAAGGUUUUUUAUGACACAACAGCCACAAGCCAAAUACCGCCAUGACUAUCGCGCGCCGGAUUACCAGAUUACUGAUAUUGACUUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0154155 |
0.7979576 |
pepN |
1252575 |
aminopeptidase N |
STM1179 |
22 |
44 |
38 |
44 |
7.1 |
GcvB |
35 |
58 |
35 |
41 |
5.79 |
-16.06 |
-28.95 |
-1.55712 |
GCCAAAACCGGUCUGGACGCGCA&UGCGUGUUCUGAUGGGCUUUUGGC |
(((((((((..((.(((((((((&))))))))).))..)).))))))) |
AGGUUAUCACCAGCGUAGAUGAGAACGAAGGGCGAGCUAACCAACUGCUGUCGAUGAGUUAAUACAGGACAUUUUAUGAUCAGUUCAUUAUGGAUCGCCAAAACCGGUCUGGACGCGCAGCAAACCAAUAUGGAUGUGAUUGCCAAUAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.004788 |
0.6975035 |
flgG |
1252697 |
flagellar basal-body rod protein FlgG |
STM2328 |
11 |
48 |
11 |
17 |
9.42 |
GcvB |
32 |
75 |
69 |
75 |
13.51 |
-14.14 |
-37.07 |
-1.37096 |
CAACAUCCACUGAAGUCAUCGCUCAUCACUGGGCAUUC&GAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUG |
((((((((((((((((((..((((((((....((((((&))))))......))))))))...)))))).))).)).))))))) |
CCUCCCCAUGAAUCGAUGUGGCGCCCAUCUGCCGUAAAGAGCAGAGAAACUGGCGCUACUUUUGAUGAGUAAGCAAUGAGUAUGUCAACAUCCACUGAAGUCAUCGCUCAUCACUGGGCAUUCGCUAUCUUUCUUAUCGUUGCCAUUGGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0159714 |
0.7979576 |
nuoA |
1253850 |
NADH-quinone oxidoreductase subunit A |
STM2801 |
35 |
49 |
42 |
48 |
3.54 |
GcvB |
151 |
164 |
152 |
158 |
1.44 |
-15.18 |
-20.16 |
-1.47179 |
UGGAAAAGGCAGGGU&ACCCUGUCUGUCCA |
((((..(((((((((&))))))))).)))) |
UGGACUUUUCUGAAAGCGUUGAUAACGCGCUAUCGGGUAAGGUAAGCCCGCAGUACAAGAGAAUGAGGAUAAAAUAUGUAUUUACGACCUGACGAGGUGGCGCGGGUACUGGAAAAGGCAGGGUUUACCGUCGAUGUGGUGACGAAUAAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0084743 |
0.7799855 |
ygaC |
1254324 |
similar to E. coli orf hypothetical protein (AAC75718.1) Blastp hit to AAC75718.1 (114 aa) 88% identity in aa 1 - 112 |
STM3843 |
7 |
49 |
43 |
49 |
16.07 |
GcvB |
37 |
85 |
37 |
43 |
13.09 |
-14.9 |
-44.06 |
-1.44465 |
CAUAACGACACUAUCGUCGCCCAGGCAACCCCACCGGGACGCG&CGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUG |
(((((((((((...((((((((((.(((.((((.(((((((((&))))))))).))))...))).))...))..))))))..))))))))))) |
AACGCUUAUCAGGCCUACAAUCAAAAGGCGGUCAUAUGACCGCCUUUUUUUAUUGCAACAAAGUUGAGACUAACCAUGAGCCAUAACGACACUAUCGUCGCCCAGGCAACCCCACCGGGACGCGGUGGCGUGGGUAUCCUGCGUAUUUCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0100932 |
0.7883581 |
trmE |
1255370 |
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE |
STM3609 |
2 |
53 |
15 |
21 |
10.96 |
GcvB |
25 |
91 |
71 |
77 |
19.1 |
-17.04 |
-47.1 |
-1.65213 |
UGCAAGCAACCGCCACAACACUCGACCAUGAGCAGGAACAUGUUCCGGUAAA&UUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
((((((((.....(((((((..(((((.(((((..(((((((((((((((((&))))))))))..))))))).............))))).)))))...)))))))......)))))))) |
CUUUUGUUACACAUUGAAAUAUAACUUUUGCUGUGCGUAAUAUGGCUAUUCGUUCGCUAAAAAUAAGAAAAUAGUAUGCAAGCAACCGCCACAACACUCGACCAUGAGCAGGAACAUGUUCCGGUAAACUCACGCAAUAAAGUCGUUAUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0024321 |
0.659913 |
yhjE |
1255132 |
MFS transporter |
STM4558 |
-7 |
58 |
24 |
30 |
12.74 |
GcvB |
36 |
91 |
63 |
69 |
14.51 |
-14.84 |
-42.09 |
-1.43883 |
UGCGAACAUGAACACGAUUUCUAUCCUCAGCACGACCGAUCUCCCCGCAGCCUGGCAGAUUGAGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
(((((((((((((((((..........((.((((((((.....((...((((...((((....((&))....))))...))))...))....)))))))).))))))))..))))))))))) |
UCACGACGCCGGCGUUUAAUGAACUCCGGGCAAACCCGGCGGCACGCGCCGCACUAUGGCAACAAAUCUGCGAACAUGAACACGAUUUCUAUCCUCAGCACGACCGAUCUCCCCGCAGCCUGGCAGAUUGAGCAACGCGCUCAUGCGUUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0104742 |
0.7883581 |
rimI |
1256084 |
ribosomal-protein-alanine N-acetyltransferase |
STM0283 |
41 |
60 |
54 |
60 |
3.62 |
GcvB |
152 |
169 |
152 |
158 |
2.38 |
-16.47 |
-22.47 |
-1.59687 |
CAGUAUGUGGCGUGACGGGG&CCCUGUCUGUCCAUAGUG |
((.((((.(((..(((((((&))))))).))))))).)) |
CGGUGGCGGAUAACGGCAGUAAAGCCGGGCGGGCGAAAAACCGUCGGGUGGAAAUUCUGGUAGUGGAGUGAAUGAAUGAUGAAAAAAUCAACCUAUGAUGUGUCUCAUCAUUCGGCAGUAUGUGGCGUGACGGGGGAUUAUUAUCGGAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0036267 |
0.6975035 |
|
1251802 |
|