| 164 |
0.04503 |
0.7389 |
lmo2361 |
N/A |
-17.31 |
0.035661 |
175 -- 215 |
153 -- 209 |
|
|
_____________174____________216\n_____________|______________|\n5'-CCA...AGGUA_________A____GAGGA...ACC-3'\n______________AUAAUGGGA_GAGG\n______________||||:||||_||||\n______________UAUUGCCCU_CUCC\n3'-GUU...AUACG_________A____GUAUC...GGA-5'\n_____________|______________|\n_____________210____________152\n |
177 -- 183 |
201 -- 207 |
-18.1933 kcal/mol |
2.24476 kcal/mol |
3.5857 kcal/mol |
174 216@LB@ | |@LB@5'-CCA...AGGUA A GAGGA...ACC-3'@LB@ AUAAUGGGA GAGG@LB@ ||||:|||| ||||@LB@ UAUUGCCCU CUCC@LB@3'-GUU...AUACG A GUAUC...GGA-5'@LB@ | |@LB@ 210 152@LB@@LB@@LB@Energy -17.31 kcal/mol@LB@Hybridization Energy -18.1933 kcal/mol@LB@Unfolding Energy - mRNA 2.24476 kcal/mol@LB@Unfolding Energy - sRNA 3.5857 kcal/mol@LB@@LB@Position - mRNA 175 -- 215@LB@Position - sRNA 153 -- 209@LB@Position Seed - mRNA 177 -- 183@LB@Position Seed - sRNA 201 -- 207@LB@ |
| 107 |
0.02737 |
0.6733 |
lmo1575 |
N/A |
-17.23 |
0.037041 |
80 -- 118 |
156 -- 205 |
|
|
_____________79______119\n_____________|_______|\n5'-GUA...UCACA_______C-3'\n______________AAUGGGG\n______________||:|||:\n______________UUGCCCU\n3'-GUU...ACGUA_______ACUCC...GGA-5'\n_____________|_______|\n_____________206_____155\n |
293 -- 299 |
201 -- 207 |
-8.20946 kcal/mol |
0.611387 kcal/mol |
0.326294 kcal/mol |
79 119@LB@ | |@LB@5'-GUA...UCACA C-3'@LB@ AAUGGGG@LB@ ||:|||:@LB@ UUGCCCU@LB@3'-GUU...ACGUA ACUCC...GGA-5'@LB@ | |@LB@ 206 155@LB@@LB@@LB@Energy -17.23 kcal/mol@LB@Hybridization Energy -8.20946 kcal/mol@LB@Unfolding Energy - mRNA 0.611387 kcal/mol@LB@Unfolding Energy - sRNA 0.326294 kcal/mol@LB@@LB@Position - mRNA 80 -- 118@LB@Position - sRNA 156 -- 205@LB@Position Seed - mRNA 293 -- 299@LB@Position Seed - sRNA 201 -- 207@LB@ |
| 54 |
0.01218 |
0.6043 |
lmo0065 |
N/A |
-17.22 |
0.037093 |
77 -- 100 |
146 -- 171 |
lmo0065 |
|
_____________76_________________________101\n_____________|__________________________|\n5'-GUA...GCAUU____________________U_____UGGUA...CUA-3'\n______________UGAGAUG___GAAGACAAAU_AAUGA\n______________|||||||___|||:||||||_|||||\n______________ACUCUAC___CUUUUGUUUA_UUACU\n3'-GUU...CGGUU_______UUA________________AAAAC...GGA-5'\n_____________|__________________________|\n_____________172________________________145\n |
87 -- 93 |
152 -- 158 |
-20.9762 kcal/mol |
2.94176 kcal/mol |
5.93625 kcal/mol |
76 101@LB@ | |@LB@5'-GUA...GCAUU U UGGUA...CUA-3'@LB@ UGAGAUG GAAGACAAAU AAUGA@LB@ ||||||| |||:|||||| |||||@LB@ ACUCUAC CUUUUGUUUA UUACU@LB@3'-GUU...CGGUU UUA AAAAC...GGA-5'@LB@ | |@LB@ 172 145@LB@@LB@@LB@Energy -17.22 kcal/mol@LB@Hybridization Energy -20.9762 kcal/mol@LB@Unfolding Energy - mRNA 2.94176 kcal/mol@LB@Unfolding Energy - sRNA 5.93625 kcal/mol@LB@@LB@Position - mRNA 77 -- 100@LB@Position - sRNA 146 -- 171@LB@Position Seed - mRNA 87 -- 93@LB@Position Seed - sRNA 152 -- 158@LB@ |
| 71 |
0.01891 |
0.6733 |
lmo2349 |
N/A |
-17.22 |
0.037183 |
66 -- 119 |
160 -- 206 |
amino acid ABC transporter substrate-binding protein |
|
_____________65______________________________________________________________________________________________________________________120\n_____________|_______________________________________________________________________________________________________________________|\n5'-ACC...GCACU___A_______CUUCUGCCAGA___________UG_______GA_____A__U__________________UU_______C__UUUU_A_______GA_G___________U_______UUAUG...AAG-3'\n______________GAC_CUUGGAA___________AAACA__UCCA__GUUGCUG__UAUGU_UC__GCGCC________GCGG__AUGAGGU_UA____G_ACAUGAG__A_ACGGC____GA_GUGGGUG\n______________|||_||:|:||___________|||||__||||__|||||::__:||||_||__|||||________:|||__||||||:_||____|_||||||:__|_|||||____||_:||::||\n______________CUG_GAGCUUU___________UUUGU__AGGU__CAACGGU__GUACA_AG__CGCGG________UGCC__UACUCCG_AU____C_UGUACUU__U_UGCCG____CU_UACUUAC\n___3'-GUUUUUUU___C_______A_______________AA____CG_______A_________CC_____AUACGUAU____C________U_______________GA_G_____GUUA__C_______UUUUG...GGA-5'\n_____________|_______________________________________________________________________________________________________________________|\n_____________207_____________________________________________________________________________________________________________________159\n |
107 -- 113 |
161 -- 167 |
-71.8793 kcal/mol |
29.0166 kcal/mol |
34.5254 kcal/mol |
65 120@LB@ | |@LB@5'-ACC...GCACU A CUUCUGCCAGA UG GA A U UU C UUUU A GA G U UUAUG...AAG-3'@LB@ GAC CUUGGAA AAACA UCCA GUUGCUG UAUGU UC GCGCC GCGG AUGAGGU UA G ACAUGAG A ACGGC GA GUGGGUG@LB@ ||| ||:|:|| ||||| |||| |||||:: :|||| || ||||| :||| ||||||: || | ||||||: | ||||| || :||::||@LB@ CUG GAGCUUU UUUGU AGGU CAACGGU GUACA AG CGCGG UGCC UACUCCG AU C UGUACUU U UGCCG CU UACUUAC@LB@ 3'-GUUUUUUU C A AA CG A CC AUACGUAU C U GA G GUUA C UUUUG...GGA-5'@LB@ | |@LB@ 207 159@LB@@LB@@LB@Energy -17.22 kcal/mol@LB@Hybridization Energy -71.8793 kcal/mol@LB@Unfolding Energy - mRNA 29.0166 kcal/mol@LB@Unfolding Energy - sRNA 34.5254 kcal/mol@LB@@LB@Position - mRNA 66 -- 119@LB@Position - sRNA 160 -- 206@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 161 -- 167@LB@ |
| 113 |
0.02939 |
0.6968 |
lmo0232 |
clpC |
-17.21 |
0.037249 |
171 -- 212 |
159 -- 202 |
endopeptidase Clp ATP-binding chain C |
|
_____________170___________________________________________213\n_____________|_____________________________________________|\n5'-AUU...UAAAU________U__C____A___GGAA__AA___________UU____CGAUU...AUA-3'\n______________GAUGAGGC_UA_GAUA_GGA____AC___CAAUGA__UG__UGGA\n______________||||||||_||_||:|_|:|____||___||||||__||__||:|\n______________CUACUCCG_AU_CUGU_CUU____UG___GUUACU__AC__ACUU\n3'-GUU...UUGCC________U_______A___GAUG__CCG______CU__UU____UUGUU...GGA-5'\n_____________|_____________________________________________|\n_____________203___________________________________________158\n |
172 -- 178 |
195 -- 201 |
-28.9894 kcal/mol |
4.99237 kcal/mol |
13.9304 kcal/mol |
170 213@LB@ | |@LB@5'-AUU...UAAAU U C A GGAA AA UU CGAUU...AUA-3'@LB@ GAUGAGGC UA GAUA GGA AC CAAUGA UG UGGA@LB@ |||||||| || ||:| |:| || |||||| || ||:|@LB@ CUACUCCG AU CUGU CUU UG GUUACU AC ACUU@LB@3'-GUU...UUGCC U A GAUG CCG CU UU UUGUU...GGA-5'@LB@ | |@LB@ 203 158@LB@@LB@@LB@Energy -17.21 kcal/mol@LB@Hybridization Energy -28.9894 kcal/mol@LB@Unfolding Energy - mRNA 4.99237 kcal/mol@LB@Unfolding Energy - sRNA 13.9304 kcal/mol@LB@@LB@Position - mRNA 171 -- 212@LB@Position - sRNA 159 -- 202@LB@Position Seed - mRNA 172 -- 178@LB@Position Seed - sRNA 195 -- 201@LB@ |
| 94 |
0.02439 |
0.6733 |
lmo0952 |
N/A |
-17.21 |
0.037353 |
188 -- 223 |
166 -- 199 |
lmo0952 |
|
_____________187__________________________________224\n_____________|____________________________________|\n5'-AAC...AAACG________UU__GAU_____A___AA__________AGUAC...UAA-3'\n______________GAGGCAUA__CA___GAUUA_ACG__CUGGUGAGAU\n______________||||||||__||___:|:||_|||__|:::||||||\n______________CUCCGUAU__GU___UUGAU_UGC__GGUUACUCUA\n3'-GUU...CCCUA________CU__AC______G___C___________CUUAC...GGA-5'\n_____________|____________________________________|\n_____________200__________________________________165\n |
217 -- 223 |
166 -- 172 |
-30.0979 kcal/mol |
6.14462 kcal/mol |
13.4403 kcal/mol |
187 224@LB@ | |@LB@5'-AAC...AAACG UU GAU A AA AGUAC...UAA-3'@LB@ GAGGCAUA CA GAUUA ACG CUGGUGAGAU@LB@ |||||||| || :|:|| ||| |:::||||||@LB@ CUCCGUAU GU UUGAU UGC GGUUACUCUA@LB@3'-GUU...CCCUA CU AC G C CUUAC...GGA-5'@LB@ | |@LB@ 200 165@LB@@LB@@LB@Energy -17.21 kcal/mol@LB@Hybridization Energy -30.0979 kcal/mol@LB@Unfolding Energy - mRNA 6.14462 kcal/mol@LB@Unfolding Energy - sRNA 13.4403 kcal/mol@LB@@LB@Position - mRNA 188 -- 223@LB@Position - sRNA 166 -- 199@LB@Position Seed - mRNA 217 -- 223@LB@Position Seed - sRNA 166 -- 172@LB@ |
| 119 |
0.03213 |
0.6968 |
lmo2454 |
N/A |
-17.21 |
0.037384 |
166 -- 217 |
153 -- 209 |
lmo2454 |
|
_____________165_____________218\n_____________|_______________|\n5'-GUG...GACGC__U____C_______AAGCC...AAA-3'\n______________UG_GGUG_AUGAAAA\n______________||_|:||_|||||||\n______________AC_CUAC_UACUUUU\n3'-GUU...CGGUU__U____U_______GUUUA...GGA-5'\n_____________|_______________|\n_____________210_____________152\n |
274 -- 280 |
157 -- 163 |
-10.6243 kcal/mol |
2.77636 kcal/mol |
0.905109 kcal/mol |
165 218@LB@ | |@LB@5'-GUG...GACGC U C AAGCC...AAA-3'@LB@ UG GGUG AUGAAAA@LB@ || |:|| |||||||@LB@ AC CUAC UACUUUU@LB@3'-GUU...CGGUU U U GUUUA...GGA-5'@LB@ | |@LB@ 210 152@LB@@LB@@LB@Energy -17.21 kcal/mol@LB@Hybridization Energy -10.6243 kcal/mol@LB@Unfolding Energy - mRNA 2.77636 kcal/mol@LB@Unfolding Energy - sRNA 0.905109 kcal/mol@LB@@LB@Position - mRNA 166 -- 217@LB@Position - sRNA 153 -- 209@LB@Position Seed - mRNA 274 -- 280@LB@Position Seed - sRNA 157 -- 163@LB@ |
| 116 |
0.03152 |
0.6968 |
lmo1963 |
N/A |
-17.16 |
0.038227 |
218 -- 258 |
130 -- 166 |
|
|
_____________217___________________________________________259\n_____________|_____________________________________________|\n5'-ACA...CACAU_________AAC________A__GUC___U___________U___GGUGA...UCC-3'\n______________UGAAUGGAA___GCGAAUAA_GA___UGG_UGUUUGGGCAG_UGU\n______________||||||:||___:|:|||||_||___|||_|||:|:::|||_|||\n______________ACUUACUUU___UGUUUAUU_CU___ACC_ACAGAUUUGUC_ACA\n3'-GUU...ACUCU____________________A__AAA_______________U___GACUG...GGA-5'\n_____________|_____________________________________________|\n_____________167___________________________________________129\n |
220 -- 226 |
158 -- 164 |
-34.7415 kcal/mol |
9.15867 kcal/mol |
13.701 kcal/mol |
217 259@LB@ | |@LB@5'-ACA...CACAU AAC A GUC U U GGUGA...UCC-3'@LB@ UGAAUGGAA GCGAAUAA GA UGG UGUUUGGGCAG UGU@LB@ ||||||:|| :|:||||| || ||| |||:|:::||| |||@LB@ ACUUACUUU UGUUUAUU CU ACC ACAGAUUUGUC ACA@LB@3'-GUU...ACUCU A AAA U GACUG...GGA-5'@LB@ | |@LB@ 167 129@LB@@LB@@LB@Energy -17.16 kcal/mol@LB@Hybridization Energy -34.7415 kcal/mol@LB@Unfolding Energy - mRNA 9.15867 kcal/mol@LB@Unfolding Energy - sRNA 13.701 kcal/mol@LB@@LB@Position - mRNA 218 -- 258@LB@Position - sRNA 130 -- 166@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 158 -- 164@LB@ |
| 77 |
0.02006 |
0.6733 |
lmo1400 |
N/A |
-17.16 |
0.038248 |
136 -- 215 |
157 -- 223 |
N-acetyltransferase |
|
_____________135_____________216\n_____________|_______________|\n5'-AAA...GUUUU_______________AUUUU...AAG-3'\n______________UGAG_UGAGUGGAAA\n______________||||_|||:||:|||\n______________ACUC_ACUUACUUUU\n3'-GUU...CGGUU____U__________GUUUA...GGA-5'\n_____________|_______________|\n_____________224_____________156\n |
209 -- 215 |
157 -- 163 |
-14.2437 kcal/mol |
2.95971 kcal/mol |
0.905109 kcal/mol |
135 216@LB@ | |@LB@5'-AAA...GUUUU AUUUU...AAG-3'@LB@ UGAG UGAGUGGAAA@LB@ |||| |||:||:|||@LB@ ACUC ACUUACUUUU@LB@3'-GUU...CGGUU U GUUUA...GGA-5'@LB@ | |@LB@ 224 156@LB@@LB@@LB@Energy -17.16 kcal/mol@LB@Hybridization Energy -14.2437 kcal/mol@LB@Unfolding Energy - mRNA 2.95971 kcal/mol@LB@Unfolding Energy - sRNA 0.905109 kcal/mol@LB@@LB@Position - mRNA 136 -- 215@LB@Position - sRNA 157 -- 223@LB@Position Seed - mRNA 209 -- 215@LB@Position Seed - sRNA 157 -- 163@LB@ |
| 118 |
0.03209 |
0.6968 |
lmo0654 |
N/A |
-17.15 |
0.038336 |
200 -- 225 |
156 -- 180 |
lmo0654 |
|
_____________199________________________226\n_____________|__________________________|\n5'-GAA...GCGCG_______C______AUUUAA______UAGAA...CAC-3'\n______________UAUGGCC_AUGAGA______GAGAAC\n______________:|:||||_||||||______||:|||\n______________GUGCCGG_UACUCU______CUUUUG\n3'-GUU...UUGAU_______U______ACUUA_______UUUAU...GGA-5'\n_____________|__________________________|\n_____________181________________________155\n |
200 -- 206 |
174 -- 180 |
-23.3306 kcal/mol |
3.96502 kcal/mol |
8.29586 kcal/mol |
199 226@LB@ | |@LB@5'-GAA...GCGCG C AUUUAA UAGAA...CAC-3'@LB@ UAUGGCC AUGAGA GAGAAC@LB@ :|:|||| |||||| ||:|||@LB@ GUGCCGG UACUCU CUUUUG@LB@3'-GUU...UUGAU U ACUUA UUUAU...GGA-5'@LB@ | |@LB@ 181 155@LB@@LB@@LB@Energy -17.15 kcal/mol@LB@Hybridization Energy -23.3306 kcal/mol@LB@Unfolding Energy - mRNA 3.96502 kcal/mol@LB@Unfolding Energy - sRNA 8.29586 kcal/mol@LB@@LB@Position - mRNA 200 -- 225@LB@Position - sRNA 156 -- 180@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 174 -- 180@LB@ |
