| 47 |
0.0004845 |
0.03632 |
b0102 |
zapD |
-14.30 |
0.007459 |
100 -- 148 |
1 -- 47 |
FtsZ stabilizer |
|
_____________99____________________________________________________149\n_____________|_____________________________________________________|\n5'-ACC...UCAUU_______AC_______CCGG___________AUCG________C_________ACGCA...CCA-3'\n______________GAUAAUA___GGCGCA____AUG_CUAUCGC____GAUGUUGC___CGCCUGC\n______________||:||||___:|||||____|:|_|:|||||____||:|||||___|:|||||\n______________CUGUUAU___UCGCGU____UGC_GGUAGCG____CUGCAACG___GUGGACG\n3'-UUU...UCAUU_______ACC_____________G_______AA__________UAA_______-5'\n_____________|____________________________________________________|\n_____________48___________________________________________________1\n |
142 -- 148 |
1 -- 7 |
-50.0565 kcal/mol |
18.9794 kcal/mol |
16.7767 kcal/mol |
99 149@LB@ | |@LB@5'-ACC...UCAUU AC CCGG AUCG C ACGCA...CCA-3'@LB@ GAUAAUA GGCGCA AUG CUAUCGC GAUGUUGC CGCCUGC@LB@ ||:|||| :||||| |:| |:||||| ||:||||| |:|||||@LB@ CUGUUAU UCGCGU UGC GGUAGCG CUGCAACG GUGGACG@LB@3'-UUU...UCAUU ACC G AA UAA -5'@LB@ | |@LB@ 48 1@LB@@LB@@LB@Energy -14.30 kcal/mol@LB@Hybridization Energy -50.0565 kcal/mol@LB@Unfolding Energy - mRNA 18.9794 kcal/mol@LB@Unfolding Energy - sRNA 16.7767 kcal/mol@LB@@LB@Position - mRNA 100 -- 148@LB@Position - sRNA 1 -- 47@LB@Position Seed - mRNA 142 -- 148@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 193 |
0.00868 |
0.1548 |
b4226 |
ppa |
-9.88 |
0.117380 |
102 -- 122 |
43 -- 61 |
inorganic pyrophosphatase |
|
_____________101___________________123\n_____________|_____________________|\n5'-AUA...CUGGU__________AAUG_______AAACA...UCG-3'\n______________GAAAAAGGAA____AAGACGA\n______________:|||||||||____|||||:|\n______________UUUUUUCCUU____UUCUGUU\n3'-UUU...UUAAG__________CA_________AUACC...ACG-5'\n_____________|_____________________|\n_____________62____________________42\n |
116 -- 122 |
43 -- 49 |
-15.2744 kcal/mol |
3.19261 kcal/mol |
2.19883 kcal/mol |
101 123@LB@ | |@LB@5'-AUA...CUGGU AAUG AAACA...UCG-3'@LB@ GAAAAAGGAA AAGACGA@LB@ :||||||||| |||||:|@LB@ UUUUUUCCUU UUCUGUU@LB@3'-UUU...UUAAG CA AUACC...ACG-5'@LB@ | |@LB@ 62 42@LB@@LB@@LB@Energy -9.88 kcal/mol@LB@Hybridization Energy -15.2744 kcal/mol@LB@Unfolding Energy - mRNA 3.19261 kcal/mol@LB@Unfolding Energy - sRNA 2.19883 kcal/mol@LB@@LB@Position - mRNA 102 -- 122@LB@Position - sRNA 43 -- 61@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 43 -- 49@LB@ |
| 194 |
0.008684 |
0.1548 |
b1242 |
ychE |
-7.20 |
0.413978 |
105 -- 113 |
48 -- 56 |
UPF0056 family inner membrane protein |
|
_____________104_______114\n_____________|_________|\n5'-CAU...UAGUU_________AAAAU...GCA-3'\n______________AGGAGGUGA\n______________||||:||:|\n______________UCCUUCAUU\n3'-UUU...UUUUU_________CUGUU...ACG-5'\n_____________|_________|\n_____________57________47\n |
107 -- 113 |
48 -- 54 |
-10.6218 kcal/mol |
2.70901 kcal/mol |
0.718267 kcal/mol |
104 114@LB@ | |@LB@5'-CAU...UAGUU AAAAU...GCA-3'@LB@ AGGAGGUGA@LB@ ||||:||:|@LB@ UCCUUCAUU@LB@3'-UUU...UUUUU CUGUU...ACG-5'@LB@ | |@LB@ 57 47@LB@@LB@@LB@Energy -7.20 kcal/mol@LB@Hybridization Energy -10.6218 kcal/mol@LB@Unfolding Energy - mRNA 2.70901 kcal/mol@LB@Unfolding Energy - sRNA 0.718267 kcal/mol@LB@@LB@Position - mRNA 105 -- 113@LB@Position - sRNA 48 -- 56@LB@Position Seed - mRNA 107 -- 113@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 196 |
0.008885 |
0.1548 |
b3052 |
hldE |
-13.36 |
0.014255 |
113 -- 160 |
38 -- 93 |
heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase |
|
_____________112______________________________________________________161\n_____________|________________________________________________________|\n5'-GCG...UGAAC_G________________________A___GGCUGGU______AAU__________UAUUA...CGC-3'\n______________U_GUGCGGG_CAA____GCUG_GCAG_AGU________GGAAG___GA_AGUAUGG\n______________|_||:||::_|||____|||:_||||_|:|________|||||___||_|:|||||\n______________A_CAUGCUU_GUU____CGAU_CGUC_UUA________CCUUC___CU_UUAUACC\n3'-UUU...GCCGC_G_______A___AACA____A____A___AGUUUUUU_____AUU__G_______UCGCG...ACG-5'\n_____________|________________________________________________________|\n_____________94_______________________________________________________37\n |
154 -- 160 |
38 -- 44 |
-32.7339 kcal/mol |
11.626 kcal/mol |
7.73696 kcal/mol |
112 161@LB@ | |@LB@5'-GCG...UGAAC G A GGCUGGU AAU UAUUA...CGC-3'@LB@ U GUGCGGG CAA GCUG GCAG AGU GGAAG GA AGUAUGG@LB@ | ||:||:: ||| |||: |||| |:| ||||| || |:|||||@LB@ A CAUGCUU GUU CGAU CGUC UUA CCUUC CU UUAUACC@LB@3'-UUU...GCCGC G A AACA A A AGUUUUUU AUU G UCGCG...ACG-5'@LB@ | |@LB@ 94 37@LB@@LB@@LB@Energy -13.36 kcal/mol@LB@Hybridization Energy -32.7339 kcal/mol@LB@Unfolding Energy - mRNA 11.626 kcal/mol@LB@Unfolding Energy - sRNA 7.73696 kcal/mol@LB@@LB@Position - mRNA 113 -- 160@LB@Position - sRNA 38 -- 93@LB@Position Seed - mRNA 154 -- 160@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 176 |
0.007245 |
0.145 |
b0397 |
sbcC |
-11.91 |
0.036282 |
117 -- 185 |
1 -- 55 |
exonuclease dsDNA ATP-dependent |
|
_____________116____________________________________________________________________186\n_____________|______________________________________________________________________|\n5'-GAA...GCACU_____AACU______AUCGC___A__________CA__AUCUUUUCACCAC__________A_____C__CGGAG...UUG-3'\n______________GGAAG____GGAUGA_____AGC_GCAACGUCUG__GC_____________GACGUUGCAU_C_CCU_GC\n______________|||||____:||::|_____|||_||||||:|::__||_____________||||||||||_|_|||_||\n______________CCUUC____UCUGUU_____UCG_CGUUGCGGGU__CG_____________CUGCAACGUA_G_GGA_CG\n3'-UUU...UUUUU_____AU________AUACC______________AG__AA_____________________A_U______-5'\n_____________|_____________________________________________________________________|\n_____________56____________________________________________________________________1\n |
170 -- 176 |
10 -- 16 |
-47.2501 kcal/mol |
18.5328 kcal/mol |
16.8092 kcal/mol |
116 186@LB@ | |@LB@5'-GAA...GCACU AACU AUCGC A CA AUCUUUUCACCAC A C CGGAG...UUG-3'@LB@ GGAAG GGAUGA AGC GCAACGUCUG GC GACGUUGCAU C CCU GC@LB@ ||||| :||::| ||| ||||||:|:: || |||||||||| | ||| ||@LB@ CCUUC UCUGUU UCG CGUUGCGGGU CG CUGCAACGUA G GGA CG@LB@3'-UUU...UUUUU AU AUACC AG AA A U -5'@LB@ | |@LB@ 56 1@LB@@LB@@LB@Energy -11.91 kcal/mol@LB@Hybridization Energy -47.2501 kcal/mol@LB@Unfolding Energy - mRNA 18.5328 kcal/mol@LB@Unfolding Energy - sRNA 16.8092 kcal/mol@LB@@LB@Position - mRNA 117 -- 185@LB@Position - sRNA 1 -- 55@LB@Position Seed - mRNA 170 -- 176@LB@Position Seed - sRNA 10 -- 16@LB@ |
| 75 |
0.001837 |
0.08273 |
b1816 |
yoaE |
-14.98 |
0.004573 |
118 -- 155 |
1 -- 35 |
putative membrane protein/conserved protein |
|
_____________117____________________________________156\n_____________|______________________________________|\n5'-GAU...CUCUA___C__A___U_______C__U___U____A_______AUUAU...UUC-3'\n______________UGC_GC_CCU_UCGUUUG_AU_UUG_CGUU_CGCCUGC\n______________:||_:|_||:_|||:|||_|:_|||_|:||_|:|||||\n______________GCG_UG_GGG_AGCGAAC_UG_AAC_GUAA_GUGGACG\n3'-UUU...ACCUC___U__C___U__________C________________-5'\n_____________|_____________________________________|\n_____________36____________________________________1\n |
149 -- 155 |
1 -- 7 |
-36.6264 kcal/mol |
6.36146 kcal/mol |
15.286 kcal/mol |
117 156@LB@ | |@LB@5'-GAU...CUCUA C A U C U U A AUUAU...UUC-3'@LB@ UGC GC CCU UCGUUUG AU UUG CGUU CGCCUGC@LB@ :|| :| ||: |||:||| |: ||| |:|| |:|||||@LB@ GCG UG GGG AGCGAAC UG AAC GUAA GUGGACG@LB@3'-UUU...ACCUC U C U C -5'@LB@ | |@LB@ 36 1@LB@@LB@@LB@Energy -14.98 kcal/mol@LB@Hybridization Energy -36.6264 kcal/mol@LB@Unfolding Energy - mRNA 6.36146 kcal/mol@LB@Unfolding Energy - sRNA 15.286 kcal/mol@LB@@LB@Position - mRNA 118 -- 155@LB@Position - sRNA 1 -- 35@LB@Position Seed - mRNA 149 -- 155@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 118 |
0.004043 |
0.119 |
b1636 |
pdxY |
-15.07 |
0.004282 |
119 -- 169 |
46 -- 90 |
pyridoxamine kinase |
|
_____________118___________________________________________________170\n_____________|_____________________________________________________|\n5'-UAU...AGAAU___U____U_________GGAAAUA_____U___G_G________________AAUCA...UCU-3'\n______________UAC__GUC_GAUU_UGCU_______AUGCA_UAA_U_GAAAGGGGGAGUGAGA\n______________|||__:||_:|||_||||_______|||||_|||_|_:|||::||:|||:|||\n______________AUG__UAG_UUAA_ACGA_______UACGU_AUU_A_UUUUUUCCUUCAUUCU\n3'-UUU...GCAGC___CU________C________________C___A_G________________GUUAU...ACG-5'\n_____________|_____________________________________________________|\n_____________91____________________________________________________45\n |
163 -- 169 |
46 -- 52 |
-32.4349 kcal/mol |
11.9314 kcal/mol |
5.43414 kcal/mol |
118 170@LB@ | |@LB@5'-UAU...AGAAU U U GGAAAUA U G G AAUCA...UCU-3'@LB@ UAC GUC GAUU UGCU AUGCA UAA U GAAAGGGGGAGUGAGA@LB@ ||| :|| :||| |||| ||||| ||| | :|||::||:|||:|||@LB@ AUG UAG UUAA ACGA UACGU AUU A UUUUUUCCUUCAUUCU@LB@3'-UUU...GCAGC CU C C A G GUUAU...ACG-5'@LB@ | |@LB@ 91 45@LB@@LB@@LB@Energy -15.07 kcal/mol@LB@Hybridization Energy -32.4349 kcal/mol@LB@Unfolding Energy - mRNA 11.9314 kcal/mol@LB@Unfolding Energy - sRNA 5.43414 kcal/mol@LB@@LB@Position - mRNA 119 -- 169@LB@Position - sRNA 46 -- 90@LB@Position Seed - mRNA 163 -- 169@LB@Position Seed - sRNA 46 -- 52@LB@ |
| 34 |
0.0002646 |
0.02697 |
b1206 |
dauA |
-13.80 |
0.010599 |
120 -- 158 |
1 -- 34 |
C4-dicarboxylic acid transporter |
|
_____________119_____________________________________159\n_____________|_______________________________________|\n5'-CCU...UGUCU_____A____U____A____CUA___CUCC_________CAUUU...UGA-3'\n______________GUAAU_UCCA_UUGU_UGAC___UGC____UUCACCUGC\n______________|:||:_:|||_|:|:_||||___|||____|||||||||\n______________CGUUG_GGGU_AGCG_ACUG___ACG____AAGUGGACG\n3'-UUU...CCUCG_____C_________A____CA____U____________-5'\n_____________|______________________________________|\n_____________35_____________________________________1\n |
152 -- 158 |
1 -- 7 |
-32.3364 kcal/mol |
3.2737 kcal/mol |
15.2664 kcal/mol |
119 159@LB@ | |@LB@5'-CCU...UGUCU A U A CUA CUCC CAUUU...UGA-3'@LB@ GUAAU UCCA UUGU UGAC UGC UUCACCUGC@LB@ |:||: :||| |:|: |||| ||| |||||||||@LB@ CGUUG GGGU AGCG ACUG ACG AAGUGGACG@LB@3'-UUU...CCUCG C A CA U -5'@LB@ | |@LB@ 35 1@LB@@LB@@LB@Energy -13.80 kcal/mol@LB@Hybridization Energy -32.3364 kcal/mol@LB@Unfolding Energy - mRNA 3.2737 kcal/mol@LB@Unfolding Energy - sRNA 15.2664 kcal/mol@LB@@LB@Position - mRNA 120 -- 158@LB@Position - sRNA 1 -- 34@LB@Position Seed - mRNA 152 -- 158@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 67 |
0.00114 |
0.05992 |
b4141 |
yjeH |
-12.53 |
0.024616 |
129 -- 146 |
73 -- 89 |
putative transporter |
|
_____________128________________147\n_____________|__________________|\n5'-CAG...CAUAA_______U__________CCAUC...CUG-3'\n______________GCGAAUC_GAUUGUGCUA\n______________:||||||_:|||||||||\n______________UGCUUAG_UUAACACGAU\n3'-UUU...CAGCA__________________ACGUC...ACG-5'\n_____________|__________________|\n_____________90_________________72\n |
140 -- 146 |
73 -- 79 |
-22.1843 kcal/mol |
7.4128 kcal/mol |
2.24587 kcal/mol |
128 147@LB@ | |@LB@5'-CAG...CAUAA U CCAUC...CUG-3'@LB@ GCGAAUC GAUUGUGCUA@LB@ :|||||| :|||||||||@LB@ UGCUUAG UUAACACGAU@LB@3'-UUU...CAGCA ACGUC...ACG-5'@LB@ | |@LB@ 90 72@LB@@LB@@LB@Energy -12.53 kcal/mol@LB@Hybridization Energy -22.1843 kcal/mol@LB@Unfolding Energy - mRNA 7.4128 kcal/mol@LB@Unfolding Energy - sRNA 2.24587 kcal/mol@LB@@LB@Position - mRNA 129 -- 146@LB@Position - sRNA 73 -- 89@LB@Position Seed - mRNA 140 -- 146@LB@Position Seed - sRNA 73 -- 79@LB@ |
| 46 |
0.0004731 |
0.03623 |
b2279 |
nuoK |
-14.07 |
0.008802 |
136 -- 157 |
69 -- 92 |
NADH:ubiquinone oxidoreductase membrane subunit K |
|
_____________135______________________158\n_____________|________________________|\n5'-GGU...AAGAG_________G__________A___AUCGU...UUG-3'\n______________CGUGCGGGU_AA__GUGCUG_GCA\n______________|||:||::|_||__|||||:_|||\n______________GCAUGCUUA_UU__CACGAU_CGU\n3'-UUU...CCGCA_________G__AA______A___CAUUA...ACG-5'\n_____________|________________________|\n_____________93_______________________68\n |
138 -- 144 |
84 -- 90 |
-25.4547 kcal/mol |
6.72556 kcal/mol |
4.66371 kcal/mol |
135 158@LB@ | |@LB@5'-GGU...AAGAG G A AUCGU...UUG-3'@LB@ CGUGCGGGU AA GUGCUG GCA@LB@ |||:||::| || |||||: |||@LB@ GCAUGCUUA UU CACGAU CGU@LB@3'-UUU...CCGCA G AA A CAUUA...ACG-5'@LB@ | |@LB@ 93 68@LB@@LB@@LB@Energy -14.07 kcal/mol@LB@Hybridization Energy -25.4547 kcal/mol@LB@Unfolding Energy - mRNA 6.72556 kcal/mol@LB@Unfolding Energy - sRNA 4.66371 kcal/mol@LB@@LB@Position - mRNA 136 -- 157@LB@Position - sRNA 69 -- 92@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 84 -- 90@LB@ |
