| 41 |
0.0003478 |
0.02948 |
b1478 |
adhP |
-14.79 |
0.005262 |
167 -- 196 |
51 -- 77 |
ethanol-active dehydrogenase/acetaldehyde-active reductase |
|
_____________166____________________________197\n_____________|______________________________|\n5'-GCA...UCACC__________AACA___UCC__________AACUA...GUU-3'\n______________UGCUAUGCAG____UCA___GAAAAGGAGG\n______________||||||||||____|||___:|||||||:|\n______________ACGAUACGUC____AGU___UUUUUCCUUC\n3'-UUU...UUAAC__________AUUA________________AUUCU...ACG-5'\n_____________|______________________________|\n_____________78_____________________________50\n |
190 -- 196 |
51 -- 57 |
-28.1635 kcal/mol |
8.82843 kcal/mol |
4.54711 kcal/mol |
166 197@LB@ | |@LB@5'-GCA...UCACC AACA UCC AACUA...GUU-3'@LB@ UGCUAUGCAG UCA GAAAAGGAGG@LB@ |||||||||| ||| :|||||||:|@LB@ ACGAUACGUC AGU UUUUUCCUUC@LB@3'-UUU...UUAAC AUUA AUUCU...ACG-5'@LB@ | |@LB@ 78 50@LB@@LB@@LB@Energy -14.79 kcal/mol@LB@Hybridization Energy -28.1635 kcal/mol@LB@Unfolding Energy - mRNA 8.82843 kcal/mol@LB@Unfolding Energy - sRNA 4.54711 kcal/mol@LB@@LB@Position - mRNA 167 -- 196@LB@Position - sRNA 51 -- 77@LB@Position Seed - mRNA 190 -- 196@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 42 |
0.0003514 |
0.02948 |
b3847 |
pepQ |
-12.53 |
0.024661 |
145 -- 205 |
37 -- 89 |
proline dipeptidase |
|
_____________144______________________________________________________________206\n_____________|________________________________________________________________|\n5'-UUG...UCUGG_________________AGA_____AGACU___GG________ACA____GGUAA___A_____AUCAC...UUC-3'\n______________AUGAA_CGA_UGUGCUA___UGCGG_____UAA__UCAAAAAA___GAAG______AA_AUGGA\n______________|:|||_|:|_|||||||___|||:|_____|||__||||||||___||||______||_|||||\n______________UGCUU_GUU_ACACGAU___ACGUC_____AUU__AGUUUUUU___CUUC______UU_UACCU\n3'-UUU...CAGCA_____A___A_______________________A_________C______AUUCUG__A_____CGCGU...ACG-5'\n_____________|________________________________________________________________|\n_____________90_______________________________________________________________36\n |
153 -- 159 |
73 -- 79 |
-31.666 kcal/mol |
11.3417 kcal/mol |
7.78939 kcal/mol |
144 206@LB@ | |@LB@5'-UUG...UCUGG AGA AGACU GG ACA GGUAA A AUCAC...UUC-3'@LB@ AUGAA CGA UGUGCUA UGCGG UAA UCAAAAAA GAAG AA AUGGA@LB@ |:||| |:| ||||||| |||:| ||| |||||||| |||| || |||||@LB@ UGCUU GUU ACACGAU ACGUC AUU AGUUUUUU CUUC UU UACCU@LB@3'-UUU...CAGCA A A A C AUUCUG A CGCGU...ACG-5'@LB@ | |@LB@ 90 36@LB@@LB@@LB@Energy -12.53 kcal/mol@LB@Hybridization Energy -31.666 kcal/mol@LB@Unfolding Energy - mRNA 11.3417 kcal/mol@LB@Unfolding Energy - sRNA 7.78939 kcal/mol@LB@@LB@Position - mRNA 145 -- 205@LB@Position - sRNA 37 -- 89@LB@Position Seed - mRNA 153 -- 159@LB@Position Seed - sRNA 73 -- 79@LB@ |
| 43 |
0.0004177 |
0.03347 |
b3652 |
recG |
-10.52 |
0.082371 |
49 -- 71 |
17 -- 38 |
ATP-dependent DNA helicase |
|
_____________48______________________72\n_____________|_______________________|\n5'-CAA...AAGCA____AA_________________AGGCG...UGC-3'\n______________GAGC__CAACGCCUGUUGUUUGA\n______________||||__|||||||::|:|:||||\n______________CUCG__GUUGCGGGUAGCGAACU\n3'-UUU...UAUAC____C__________________GCAAC...ACG-5'\n_____________|_______________________|\n_____________39______________________16\n |
63 -- 69 |
19 -- 25 |
-31.2627 kcal/mol |
8.52631 kcal/mol |
12.2147 kcal/mol |
48 72@LB@ | |@LB@5'-CAA...AAGCA AA AGGCG...UGC-3'@LB@ GAGC CAACGCCUGUUGUUUGA@LB@ |||| |||||||::|:|:||||@LB@ CUCG GUUGCGGGUAGCGAACU@LB@3'-UUU...UAUAC C GCAAC...ACG-5'@LB@ | |@LB@ 39 16@LB@@LB@@LB@Energy -10.52 kcal/mol@LB@Hybridization Energy -31.2627 kcal/mol@LB@Unfolding Energy - mRNA 8.52631 kcal/mol@LB@Unfolding Energy - sRNA 12.2147 kcal/mol@LB@@LB@Position - mRNA 49 -- 71@LB@Position - sRNA 17 -- 38@LB@Position Seed - mRNA 63 -- 69@LB@Position Seed - sRNA 19 -- 25@LB@ |
| 44 |
0.0004181 |
0.03347 |
b3429 |
glgA |
-12.00 |
0.034422 |
173 -- 196 |
35 -- 55 |
glycogen synthase |
|
_____________172______________________197\n_____________|________________________|\n5'-GUA...GCUAC_____U_______UAAACA_____GAUAA...ACG-3'\n______________GGAAG_UAGGGCA______GGAGC\n______________|||||_||:|:||______|||||\n______________CCUUC_AUUCUGU______CCUCG\n3'-UUU...UUUUU_____________UAUA_______CGUUG...ACG-5'\n_____________|________________________|\n_____________56_______________________34\n |
179 -- 185 |
44 -- 50 |
-21.7083 kcal/mol |
5.57994 kcal/mol |
4.0932 kcal/mol |
172 197@LB@ | |@LB@5'-GUA...GCUAC U UAAACA GAUAA...ACG-3'@LB@ GGAAG UAGGGCA GGAGC@LB@ ||||| ||:|:|| |||||@LB@ CCUUC AUUCUGU CCUCG@LB@3'-UUU...UUUUU UAUA CGUUG...ACG-5'@LB@ | |@LB@ 56 34@LB@@LB@@LB@Energy -12.00 kcal/mol@LB@Hybridization Energy -21.7083 kcal/mol@LB@Unfolding Energy - mRNA 5.57994 kcal/mol@LB@Unfolding Energy - sRNA 4.0932 kcal/mol@LB@@LB@Position - mRNA 173 -- 196@LB@Position - sRNA 35 -- 55@LB@Position Seed - mRNA 179 -- 185@LB@Position Seed - sRNA 44 -- 50@LB@ |
| 45 |
0.0004696 |
0.03623 |
b4035 |
malK |
-9.83 |
0.120497 |
188 -- 201 |
44 -- 57 |
maltose ABC transportor ATPase |
|
_____________187____________202\n_____________|______________|\n5'-CGC...UUACA_______A______UGGCG...UGU-3'\n______________AAGGGAG_AGGGCA\n______________||||:||_|:|:||\n______________UUCCUUC_UUCUGU\n3'-UUU...GUUUU_______A______UAUAC...ACG-5'\n_____________|______________|\n_____________58_____________43\n |
188 -- 194 |
51 -- 57 |
-14.5332 kcal/mol |
2.95068 kcal/mol |
1.74831 kcal/mol |
187 202@LB@ | |@LB@5'-CGC...UUACA A UGGCG...UGU-3'@LB@ AAGGGAG AGGGCA@LB@ ||||:|| |:|:||@LB@ UUCCUUC UUCUGU@LB@3'-UUU...GUUUU A UAUAC...ACG-5'@LB@ | |@LB@ 58 43@LB@@LB@@LB@Energy -9.83 kcal/mol@LB@Hybridization Energy -14.5332 kcal/mol@LB@Unfolding Energy - mRNA 2.95068 kcal/mol@LB@Unfolding Energy - sRNA 1.74831 kcal/mol@LB@@LB@Position - mRNA 188 -- 201@LB@Position - sRNA 44 -- 57@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 51 -- 57@LB@ |
| 46 |
0.0004731 |
0.03623 |
b2279 |
nuoK |
-14.07 |
0.008802 |
136 -- 157 |
69 -- 92 |
NADH:ubiquinone oxidoreductase membrane subunit K |
|
_____________135______________________158\n_____________|________________________|\n5'-GGU...AAGAG_________G__________A___AUCGU...UUG-3'\n______________CGUGCGGGU_AA__GUGCUG_GCA\n______________|||:||::|_||__|||||:_|||\n______________GCAUGCUUA_UU__CACGAU_CGU\n3'-UUU...CCGCA_________G__AA______A___CAUUA...ACG-5'\n_____________|________________________|\n_____________93_______________________68\n |
138 -- 144 |
84 -- 90 |
-25.4547 kcal/mol |
6.72556 kcal/mol |
4.66371 kcal/mol |
135 158@LB@ | |@LB@5'-GGU...AAGAG G A AUCGU...UUG-3'@LB@ CGUGCGGGU AA GUGCUG GCA@LB@ |||:||::| || |||||: |||@LB@ GCAUGCUUA UU CACGAU CGU@LB@3'-UUU...CCGCA G AA A CAUUA...ACG-5'@LB@ | |@LB@ 93 68@LB@@LB@@LB@Energy -14.07 kcal/mol@LB@Hybridization Energy -25.4547 kcal/mol@LB@Unfolding Energy - mRNA 6.72556 kcal/mol@LB@Unfolding Energy - sRNA 4.66371 kcal/mol@LB@@LB@Position - mRNA 136 -- 157@LB@Position - sRNA 69 -- 92@LB@Position Seed - mRNA 138 -- 144@LB@Position Seed - sRNA 84 -- 90@LB@ |
| 47 |
0.0004845 |
0.03632 |
b0102 |
zapD |
-14.30 |
0.007459 |
100 -- 148 |
1 -- 47 |
FtsZ stabilizer |
|
_____________99____________________________________________________149\n_____________|_____________________________________________________|\n5'-ACC...UCAUU_______AC_______CCGG___________AUCG________C_________ACGCA...CCA-3'\n______________GAUAAUA___GGCGCA____AUG_CUAUCGC____GAUGUUGC___CGCCUGC\n______________||:||||___:|||||____|:|_|:|||||____||:|||||___|:|||||\n______________CUGUUAU___UCGCGU____UGC_GGUAGCG____CUGCAACG___GUGGACG\n3'-UUU...UCAUU_______ACC_____________G_______AA__________UAA_______-5'\n_____________|____________________________________________________|\n_____________48___________________________________________________1\n |
142 -- 148 |
1 -- 7 |
-50.0565 kcal/mol |
18.9794 kcal/mol |
16.7767 kcal/mol |
99 149@LB@ | |@LB@5'-ACC...UCAUU AC CCGG AUCG C ACGCA...CCA-3'@LB@ GAUAAUA GGCGCA AUG CUAUCGC GAUGUUGC CGCCUGC@LB@ ||:|||| :||||| |:| |:||||| ||:||||| |:|||||@LB@ CUGUUAU UCGCGU UGC GGUAGCG CUGCAACG GUGGACG@LB@3'-UUU...UCAUU ACC G AA UAA -5'@LB@ | |@LB@ 48 1@LB@@LB@@LB@Energy -14.30 kcal/mol@LB@Hybridization Energy -50.0565 kcal/mol@LB@Unfolding Energy - mRNA 18.9794 kcal/mol@LB@Unfolding Energy - sRNA 16.7767 kcal/mol@LB@@LB@Position - mRNA 100 -- 148@LB@Position - sRNA 1 -- 47@LB@Position Seed - mRNA 142 -- 148@LB@Position Seed - sRNA 1 -- 7@LB@ |
| 48 |
0.0005049 |
0.03706 |
b2331 |
smrB |
-12.55 |
0.024312 |
152 -- 200 |
43 -- 92 |
putative DNA endonuclease |
|
_____________151__________________________________________________201\n_____________|____________________________________________________|\n5'-UCA...GAUUG__C__________GUAAAC_______GAAAA_______UA___AC_______AUGAA...GAC-3'\n______________CG_UACGAGUCGG________UGUAG_____UUAGAAA__GAG___AGAUAA\n______________||_|||||:||::________||:||_____|:|:|||__||:___|||:||\n______________GC_AUGCUUAGUU________ACGUC_____AGUUUUU__CUU___UCUGUU\n3'-UUU...CCGCA_____________AACACGAU_____AUUA________UC___CAU______AUACC...ACG-5'\n_____________|____________________________________________________|\n_____________93___________________________________________________42\n |
158 -- 164 |
81 -- 87 |
-25.319 kcal/mol |
6.91043 kcal/mol |
5.86211 kcal/mol |
151 201@LB@ | |@LB@5'-UCA...GAUUG C GUAAAC GAAAA UA AC AUGAA...GAC-3'@LB@ CG UACGAGUCGG UGUAG UUAGAAA GAG AGAUAA@LB@ || |||||:||:: ||:|| |:|:||| ||: |||:||@LB@ GC AUGCUUAGUU ACGUC AGUUUUU CUU UCUGUU@LB@3'-UUU...CCGCA AACACGAU AUUA UC CAU AUACC...ACG-5'@LB@ | |@LB@ 93 42@LB@@LB@@LB@Energy -12.55 kcal/mol@LB@Hybridization Energy -25.319 kcal/mol@LB@Unfolding Energy - mRNA 6.91043 kcal/mol@LB@Unfolding Energy - sRNA 5.86211 kcal/mol@LB@@LB@Position - mRNA 152 -- 200@LB@Position - sRNA 43 -- 92@LB@Position Seed - mRNA 158 -- 164@LB@Position Seed - sRNA 81 -- 87@LB@ |
| 49 |
0.0005476 |
0.03937 |
b2432 |
yfeY |
-8.84 |
0.200409 |
189 -- 199 |
48 -- 58 |
RpoE-regulated lipoprotein |
|
_____________188_________200\n_____________|___________|\n5'-GCU...UAACC___________CAUGA...ACU-3'\n______________AAAGGAAGUGA\n______________|||||||||:|\n______________UUUCCUUCAUU\n3'-UUU...AGUUU___________CUGUU...ACG-5'\n_____________|___________|\n_____________59__________47\n |
193 -- 199 |
48 -- 54 |
-12.8959 kcal/mol |
3.31176 kcal/mol |
0.745549 kcal/mol |
188 200@LB@ | |@LB@5'-GCU...UAACC CAUGA...ACU-3'@LB@ AAAGGAAGUGA@LB@ |||||||||:|@LB@ UUUCCUUCAUU@LB@3'-UUU...AGUUU CUGUU...ACG-5'@LB@ | |@LB@ 59 47@LB@@LB@@LB@Energy -8.84 kcal/mol@LB@Hybridization Energy -12.8959 kcal/mol@LB@Unfolding Energy - mRNA 3.31176 kcal/mol@LB@Unfolding Energy - sRNA 0.745549 kcal/mol@LB@@LB@Position - mRNA 189 -- 199@LB@Position - sRNA 48 -- 58@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 48 -- 54@LB@ |
| 51 |
0.0005809 |
0.04013 |
b2507 |
guaA |
-13.60 |
0.012166 |
41 -- 74 |
55 -- 93 |
GMP synthetase (glutamine aminotransferase) |
|
_____________40______________________________________75\n_____________|_______________________________________|\n5'-GGC...GGAGU_______U___________G______GC___________CCACG...ACU-3'\n______________UUGUACG_AUCA_____GC_GUGCGG__AUUCAGGAAAG\n______________|:|||||_||||_____||_:|||:|__|||||::||||\n______________AGCAUGC_UAGU_____CG_UACGUC__UAAGUUUUUUC\n3'-UUU...GCCGC_______U____UAACA__A______AU___________CUUCA...ACG-5'\n_____________|_______________________________________|\n_____________94______________________________________54\n |
41 -- 47 |
87 -- 93 |
-31.8361 kcal/mol |
13.3993 kcal/mol |
4.84189 kcal/mol |
40 75@LB@ | |@LB@5'-GGC...GGAGU U G GC CCACG...ACU-3'@LB@ UUGUACG AUCA GC GUGCGG AUUCAGGAAAG@LB@ |:||||| |||| || :|||:| |||||::||||@LB@ AGCAUGC UAGU CG UACGUC UAAGUUUUUUC@LB@3'-UUU...GCCGC U UAACA A AU CUUCA...ACG-5'@LB@ | |@LB@ 94 54@LB@@LB@@LB@Energy -13.60 kcal/mol@LB@Hybridization Energy -31.8361 kcal/mol@LB@Unfolding Energy - mRNA 13.3993 kcal/mol@LB@Unfolding Energy - sRNA 4.84189 kcal/mol@LB@@LB@Position - mRNA 41 -- 74@LB@Position - sRNA 55 -- 93@LB@Position Seed - mRNA 41 -- 47@LB@Position Seed - sRNA 87 -- 93@LB@ |
