126 |
0.02445 |
0.6177 |
b4364 |
yjjP |
-5.95 |
0.256190 |
188 -- 200 |
42 -- 53 |
DUF1212 family inner membrane protein |
|
_____________187___________201\n_____________|_____________|\n5'-UCA...UAUGA_______C_____AUGCA...UUU-3'\n______________CAAAGGG_GAGUU\n______________|||||:|_||:||\n______________GUUUCUC_CUUAA\n3'-UUU...GGGCA_____________AGUAA...ACA-5'\n_____________|_____________|\n_____________54____________41\n |
188 -- 194 |
47 -- 53 |
-11.6429 kcal/mol |
4.76073 kcal/mol |
0.933904 kcal/mol |
187 201@LB@ | |@LB@5'-UCA...UAUGA C AUGCA...UUU-3'@LB@ CAAAGGG GAGUU@LB@ |||||:| ||:||@LB@ GUUUCUC CUUAA@LB@3'-UUU...GGGCA AGUAA...ACA-5'@LB@ | |@LB@ 54 41@LB@@LB@@LB@Energy -5.95 kcal/mol@LB@Hybridization Energy -11.6429 kcal/mol@LB@Unfolding Energy - mRNA 4.76073 kcal/mol@LB@Unfolding Energy - sRNA 0.933904 kcal/mol@LB@@LB@Position - mRNA 188 -- 200@LB@Position - sRNA 42 -- 53@LB@Position Seed - mRNA 188 -- 194@LB@Position Seed - sRNA 47 -- 53@LB@ |
123 |
0.02427 |
0.6177 |
b4485 |
ytfR |
-5.89 |
0.261942 |
32 -- 42 |
44 -- 54 |
putative sugar ABC transporter ATPase |
|
_____________31__________43\n_____________|___________|\n5'-CCU...AAGAA_______A___GAAAA...GCC-3'\n______________UUAGAGA_GAA\n______________|:|:|||_|||\n______________AGUUUCU_CUU\n3'-UUU...CGGGC_______C___AAAGU...ACA-5'\n_____________|___________|\n_____________55__________43\n |
32 -- 38 |
48 -- 54 |
-7.06152 kcal/mol |
0.22708 kcal/mol |
0.939671 kcal/mol |
31 43@LB@ | |@LB@5'-CCU...AAGAA A GAAAA...GCC-3'@LB@ UUAGAGA GAA@LB@ |:|:||| |||@LB@ AGUUUCU CUU@LB@3'-UUU...CGGGC C AAAGU...ACA-5'@LB@ | |@LB@ 55 43@LB@@LB@@LB@Energy -5.89 kcal/mol@LB@Hybridization Energy -7.06152 kcal/mol@LB@Unfolding Energy - mRNA 0.22708 kcal/mol@LB@Unfolding Energy - sRNA 0.939671 kcal/mol@LB@@LB@Position - mRNA 32 -- 42@LB@Position - sRNA 44 -- 54@LB@Position Seed - mRNA 32 -- 38@LB@Position Seed - sRNA 48 -- 54@LB@ |
164 |
0.03346 |
0.6177 |
b1449 |
curA |
-5.87 |
0.264423 |
114 -- 122 |
45 -- 53 |
curcumin/dihydrocurcumin reductase NADPH-dependent |
|
_____________113_______123\n_____________|_________|\n5'-CGG...UGUUG_________UGUGA...UCG-3'\n______________CAGAGGGGA\n______________||:||:|||\n______________GUUUCUCCU\n3'-UUU...GGGCA_________UAAAG...ACA-5'\n_____________|_________|\n_____________54________44\n |
116 -- 122 |
45 -- 51 |
-11.6619 kcal/mol |
4.87234 kcal/mol |
0.917553 kcal/mol |
113 123@LB@ | |@LB@5'-CGG...UGUUG UGUGA...UCG-3'@LB@ CAGAGGGGA@LB@ ||:||:|||@LB@ GUUUCUCCU@LB@3'-UUU...GGGCA UAAAG...ACA-5'@LB@ | |@LB@ 54 44@LB@@LB@@LB@Energy -5.87 kcal/mol@LB@Hybridization Energy -11.6619 kcal/mol@LB@Unfolding Energy - mRNA 4.87234 kcal/mol@LB@Unfolding Energy - sRNA 0.917553 kcal/mol@LB@@LB@Position - mRNA 114 -- 122@LB@Position - sRNA 45 -- 53@LB@Position Seed - mRNA 116 -- 122@LB@Position Seed - sRNA 45 -- 51@LB@ |
161 |
0.03295 |
0.6177 |
b1630 |
rsxD |
-5.86 |
0.265655 |
34 -- 42 |
49 -- 57 |
SoxR iron-sulfur cluster reduction factor component; putative membrane protein of electron transport complex |
|
_____________33________43\n_____________|_________|\n5'-AGC...AGCUG_________CGGCU...CAG-3'\n______________CCGUCGAAG\n______________|||||:|||\n______________GGCAGUUUC\n3'-UUU...AACCG_________UCCUU...ACA-5'\n_____________|_________|\n_____________58________48\n |
36 -- 42 |
49 -- 55 |
-12.0908 kcal/mol |
3.50131 kcal/mol |
2.72876 kcal/mol |
33 43@LB@ | |@LB@5'-AGC...AGCUG CGGCU...CAG-3'@LB@ CCGUCGAAG@LB@ |||||:|||@LB@ GGCAGUUUC@LB@3'-UUU...AACCG UCCUU...ACA-5'@LB@ | |@LB@ 58 48@LB@@LB@@LB@Energy -5.86 kcal/mol@LB@Hybridization Energy -12.0908 kcal/mol@LB@Unfolding Energy - mRNA 3.50131 kcal/mol@LB@Unfolding Energy - sRNA 2.72876 kcal/mol@LB@@LB@Position - mRNA 34 -- 42@LB@Position - sRNA 49 -- 57@LB@Position Seed - mRNA 36 -- 42@LB@Position Seed - sRNA 49 -- 55@LB@ |
191 |
0.0398 |
0.6177 |
b4335 |
yjiM |
-5.72 |
0.281824 |
283 -- 290 |
47 -- 54 |
putative 2-hydroxyglutaryl-CoA dehydratase |
|
_____________282______291\n_____________|________|\n5'-CGG...GGAUC________CGCGG...UUC-3'\n______________UCAAGGAG\n______________||||:|||\n______________AGUUUCUC\n3'-UUU...CGGGC________CUUAA...ACA-5'\n_____________|________|\n_____________55_______46\n |
284 -- 290 |
47 -- 53 |
-8.85878 kcal/mol |
2.24401 kcal/mol |
0.897871 kcal/mol |
282 291@LB@ | |@LB@5'-CGG...GGAUC CGCGG...UUC-3'@LB@ UCAAGGAG@LB@ ||||:|||@LB@ AGUUUCUC@LB@3'-UUU...CGGGC CUUAA...ACA-5'@LB@ | |@LB@ 55 46@LB@@LB@@LB@Energy -5.72 kcal/mol@LB@Hybridization Energy -8.85878 kcal/mol@LB@Unfolding Energy - mRNA 2.24401 kcal/mol@LB@Unfolding Energy - sRNA 0.897871 kcal/mol@LB@@LB@Position - mRNA 283 -- 290@LB@Position - sRNA 47 -- 54@LB@Position Seed - mRNA 284 -- 290@LB@Position Seed - sRNA 47 -- 53@LB@ |
145 |
0.02855 |
0.6177 |
b2252 |
ais |
-5.71 |
0.282709 |
182 -- 202 |
38 -- 55 |
putative LPS core heptose(II)-phosphate phosphatase |
|
_____________181___________________203\n_____________|_____________________|\n5'-ACC...CGCUU___UAU___U_______A___GUUAG...GGA-3'\n______________GUC___AGG_GGAGUUU_CGU\n______________|||___|:|_|||:|||_|:|\n______________CAG___UUC_CCUUAAA_GUA\n3'-UUU...CCGGG___U_____U___________AAAAA...ACA-5'\n_____________|_____________________|\n_____________56____________________37\n |
192 -- 198 |
41 -- 47 |
-12.7294 kcal/mol |
5.84979 kcal/mol |
1.17036 kcal/mol |
181 203@LB@ | |@LB@5'-ACC...CGCUU UAU U A GUUAG...GGA-3'@LB@ GUC AGG GGAGUUU CGU@LB@ ||| |:| |||:||| |:|@LB@ CAG UUC CCUUAAA GUA@LB@3'-UUU...CCGGG U U AAAAA...ACA-5'@LB@ | |@LB@ 56 37@LB@@LB@@LB@Energy -5.71 kcal/mol@LB@Hybridization Energy -12.7294 kcal/mol@LB@Unfolding Energy - mRNA 5.84979 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 182 -- 202@LB@Position - sRNA 38 -- 55@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 41 -- 47@LB@ |
140 |
0.02703 |
0.6177 |
b3447 |
ggt |
-5.41 |
0.319095 |
66 -- 81 |
38 -- 54 |
gamma-glutamyltranspeptidase |
|
_____________65________________82\n_____________|_________________|\n5'-GUU...AAGAA________UC_______CGCGU...CGU-3'\n______________UCAGA_AG__GUUUCAU\n______________|||:|_||__:||||||\n______________AGUUU_UC__UAAAGUA\n3'-UUU...CGGGC_____C__CU_______AAAAA...ACA-5'\n_____________|_________________|\n_____________55________________37\n |
75 -- 81 |
38 -- 44 |
-8.61894 kcal/mol |
2.03989 kcal/mol |
1.17036 kcal/mol |
65 82@LB@ | |@LB@5'-GUU...AAGAA UC CGCGU...CGU-3'@LB@ UCAGA AG GUUUCAU@LB@ |||:| || :||||||@LB@ AGUUU UC UAAAGUA@LB@3'-UUU...CGGGC C CU AAAAA...ACA-5'@LB@ | |@LB@ 55 37@LB@@LB@@LB@Energy -5.41 kcal/mol@LB@Hybridization Energy -8.61894 kcal/mol@LB@Unfolding Energy - mRNA 2.03989 kcal/mol@LB@Unfolding Energy - sRNA 1.17036 kcal/mol@LB@@LB@Position - mRNA 66 -- 81@LB@Position - sRNA 38 -- 54@LB@Position Seed - mRNA 75 -- 81@LB@Position Seed - sRNA 38 -- 44@LB@ |
190 |
0.03948 |
0.6177 |
b2914 |
rpiA |
-5.25 |
0.339968 |
76 -- 83 |
45 -- 52 |
ribose 5-phosphate isomerase constitutive |
|
_____________75_______84\n_____________|________|\n5'-GAA...GGGCG________UGCCU...CAC-3'\n______________AAAGGGGA\n______________||||:|||\n______________UUUCUCCU\n3'-UUU...GGCAG________UAAAG...ACA-5'\n_____________|________|\n_____________53_______44\n |
77 -- 83 |
45 -- 51 |
-8.77639 kcal/mol |
2.67801 kcal/mol |
0.850469 kcal/mol |
75 84@LB@ | |@LB@5'-GAA...GGGCG UGCCU...CAC-3'@LB@ AAAGGGGA@LB@ ||||:|||@LB@ UUUCUCCU@LB@3'-UUU...GGCAG UAAAG...ACA-5'@LB@ | |@LB@ 53 44@LB@@LB@@LB@Energy -5.25 kcal/mol@LB@Hybridization Energy -8.77639 kcal/mol@LB@Unfolding Energy - mRNA 2.67801 kcal/mol@LB@Unfolding Energy - sRNA 0.850469 kcal/mol@LB@@LB@Position - mRNA 76 -- 83@LB@Position - sRNA 45 -- 52@LB@Position Seed - mRNA 77 -- 83@LB@Position Seed - sRNA 45 -- 51@LB@ |
133 |
0.02604 |
0.6177 |
b0876 |
ybjD |
-5.23 |
0.342712 |
179 -- 199 |
45 -- 55 |
putative OLD family ATP-dependent endonuclease; DUF2813 family protein |
|
_____________178___________________200\n_____________|_____________________|\n5'-CGU...GAUAA____CAUAUUUCUG_______UAUGA...GGG-3'\n______________GUCA__________GAGGGGA\n______________||||__________:||:|||\n______________CAGU__________UUCUCCU\n3'-UUU...CCGGG_____________________UAAAG...ACA-5'\n_____________|_____________________|\n_____________56____________________44\n |
193 -- 199 |
45 -- 51 |
-10.7419 kcal/mol |
4.58374 kcal/mol |
0.930875 kcal/mol |
178 200@LB@ | |@LB@5'-CGU...GAUAA CAUAUUUCUG UAUGA...GGG-3'@LB@ GUCA GAGGGGA@LB@ |||| :||:|||@LB@ CAGU UUCUCCU@LB@3'-UUU...CCGGG UAAAG...ACA-5'@LB@ | |@LB@ 56 44@LB@@LB@@LB@Energy -5.23 kcal/mol@LB@Hybridization Energy -10.7419 kcal/mol@LB@Unfolding Energy - mRNA 4.58374 kcal/mol@LB@Unfolding Energy - sRNA 0.930875 kcal/mol@LB@@LB@Position - mRNA 179 -- 199@LB@Position - sRNA 45 -- 55@LB@Position Seed - mRNA 193 -- 199@LB@Position Seed - sRNA 45 -- 51@LB@ |
163 |
0.03345 |
0.6177 |
b1235 |
rssB |
-5.20 |
0.346272 |
186 -- 195 |
44 -- 55 |
PcnB-degradosome interaction factor; response regulator |
|
_____________185__________196\n_____________|____________|\n5'-AAU...AGCCA____________AGAAC...CAA-3'\n______________GUC__AGGGGAG\n______________|||__||:|||:\n______________CAG__UCUCCUU\n3'-UUU...CCGGG___UU_______AAAGU...ACA-5'\n_____________|____________|\n_____________56___________43\n |
189 -- 195 |
44 -- 50 |
-10.1709 kcal/mol |
4.02871 kcal/mol |
0.941432 kcal/mol |
185 196@LB@ | |@LB@5'-AAU...AGCCA AGAAC...CAA-3'@LB@ GUC AGGGGAG@LB@ ||| ||:|||:@LB@ CAG UCUCCUU@LB@3'-UUU...CCGGG UU AAAGU...ACA-5'@LB@ | |@LB@ 56 43@LB@@LB@@LB@Energy -5.20 kcal/mol@LB@Hybridization Energy -10.1709 kcal/mol@LB@Unfolding Energy - mRNA 4.02871 kcal/mol@LB@Unfolding Energy - sRNA 0.941432 kcal/mol@LB@@LB@Position - mRNA 186 -- 195@LB@Position - sRNA 44 -- 55@LB@Position Seed - mRNA 189 -- 195@LB@Position Seed - sRNA 44 -- 50@LB@ |