110 |
0.004806 |
0.1538 |
b1429 |
tehA |
-12.16 |
0.096068 |
32 -- 62 |
44 -- 75 |
potassium-tellurite ethidium and proflavin transporter |
|
_____________31_________________________________63\n_____________|__________________________________|\n5'-AAU...UUCCU___A__UAAA_________C___UC_________ACGAU...UUU-3'\n______________GAU_AC____GGC___UCG_UGU__UUCACUUAG\n______________||:_||____:||___|||_|||__||||||:||\n______________CUG_UG____UCG___AGC_ACA__AAGUGAGUC\n3'-UUU...CGUUU___A__UGUG___UUA___A______________CCCUA...GCA-5'\n_____________|__________________________________|\n_____________76_________________________________43\n |
56 -- 62 |
44 -- 50 |
-20.5577 kcal/mol |
4.26011 kcal/mol |
4.13839 kcal/mol |
31 63@LB@ | |@LB@5'-AAU...UUCCU A UAAA C UC ACGAU...UUU-3'@LB@ GAU AC GGC UCG UGU UUCACUUAG@LB@ ||: || :|| ||| ||| ||||||:||@LB@ CUG UG UCG AGC ACA AAGUGAGUC@LB@3'-UUU...CGUUU A UGUG UUA A CCCUA...GCA-5'@LB@ | |@LB@ 76 43@LB@@LB@@LB@Energy -12.16 kcal/mol@LB@Hybridization Energy -20.5577 kcal/mol@LB@Unfolding Energy - mRNA 4.26011 kcal/mol@LB@Unfolding Energy - sRNA 4.13839 kcal/mol@LB@@LB@Position - mRNA 32 -- 62@LB@Position - sRNA 44 -- 75@LB@Position Seed - mRNA 56 -- 62@LB@Position Seed - sRNA 44 -- 50@LB@ |
142 |
0.006549 |
0.1605 |
b3902 |
rhaD |
-9.93 |
0.251242 |
192 -- 218 |
44 -- 69 |
rhamnulose-1-phosphate aldolase |
|
_____________191_________________________219\n_____________|___________________________|\n5'-AGA...CAGGA______AACAUGCAAAACA________UCCUG...UGA-3'\n______________ACACAG_____________UUACUCAG\n______________||||||_____________|:||||||\n______________UGUGUC_____________AGUGAGUC\n3'-UUU...UGAUG______GUUAAGCAACAA_________CCCUA...GCA-5'\n_____________|___________________________|\n_____________70__________________________43\n |
212 -- 218 |
44 -- 50 |
-16.231 kcal/mol |
2.20309 kcal/mol |
4.09554 kcal/mol |
191 219@LB@ | |@LB@5'-AGA...CAGGA AACAUGCAAAACA UCCUG...UGA-3'@LB@ ACACAG UUACUCAG@LB@ |||||| |:||||||@LB@ UGUGUC AGUGAGUC@LB@3'-UUU...UGAUG GUUAAGCAACAA CCCUA...GCA-5'@LB@ | |@LB@ 70 43@LB@@LB@@LB@Energy -9.93 kcal/mol@LB@Hybridization Energy -16.231 kcal/mol@LB@Unfolding Energy - mRNA 2.20309 kcal/mol@LB@Unfolding Energy - sRNA 4.09554 kcal/mol@LB@@LB@Position - mRNA 192 -- 218@LB@Position - sRNA 44 -- 69@LB@Position Seed - mRNA 212 -- 218@LB@Position Seed - sRNA 44 -- 50@LB@ |
154 |
0.007512 |
0.1668 |
b2180 |
yejF |
-18.70 |
0.001576 |
262 -- 293 |
44 -- 72 |
microcin C ABC transporter ATPase |
|
_____________261______________________________294\n_____________|________________________________|\n5'-GAC...AACCG_____________CAA__A_________A___AUUGAGG-3'\n______________UACGUACAGUAGU___UG_UGUUUCACU_CAG\n______________|||::||||:|:|___:|_|||||||||_|||\n______________AUGUGUGUCGUUA___GC_ACAAAGUGA_GUC\n3'-UUU...UUCUG_____________A____A_____________CCCUA...GCA-5'\n_____________|________________________________|\n_____________73_______________________________43\n |
283 -- 289 |
47 -- 53 |
-27.8629 kcal/mol |
5.03502 kcal/mol |
4.12429 kcal/mol |
261 294@LB@ | |@LB@5'-GAC...AACCG CAA A A AUUGAGG-3'@LB@ UACGUACAGUAGU UG UGUUUCACU CAG@LB@ |||::||||:|:| :| ||||||||| |||@LB@ AUGUGUGUCGUUA GC ACAAAGUGA GUC@LB@3'-UUU...UUCUG A A CCCUA...GCA-5'@LB@ | |@LB@ 73 43@LB@@LB@@LB@Energy -18.70 kcal/mol@LB@Hybridization Energy -27.8629 kcal/mol@LB@Unfolding Energy - mRNA 5.03502 kcal/mol@LB@Unfolding Energy - sRNA 4.12429 kcal/mol@LB@@LB@Position - mRNA 262 -- 293@LB@Position - sRNA 44 -- 72@LB@Position Seed - mRNA 283 -- 289@LB@Position Seed - sRNA 47 -- 53@LB@ |
4 |
8.9e-06 |
0.006694 |
b3281 |
aroE |
-13.87 |
0.039990 |
230 -- 259 |
45 -- 75 |
dehydroshikimate reductase NAD(P)-binding |
|
_____________229_____________________________260\n_____________|_______________________________|\n5'-UUU...AAUCC___A__C________A___CCA_________UCAGC...AUG-3'\n______________GAU_GC_CACAGCAA_UCG____UUCAUUCA\n______________||:_:|_||||||||_|||____||||:|||\n______________CUG_UG_GUGUCGUU_AGC____AAGUGAGU\n3'-UUU...CGUUU___A__U________A___AACA________CCCCU...GCA-5'\n_____________|_______________________________|\n_____________76______________________________44\n |
253 -- 259 |
45 -- 51 |
-26.2723 kcal/mol |
8.66309 kcal/mol |
3.74078 kcal/mol |
229 260@LB@ | |@LB@5'-UUU...AAUCC A C A CCA UCAGC...AUG-3'@LB@ GAU GC CACAGCAA UCG UUCAUUCA@LB@ ||: :| |||||||| ||| ||||:|||@LB@ CUG UG GUGUCGUU AGC AAGUGAGU@LB@3'-UUU...CGUUU A U A AACA CCCCU...GCA-5'@LB@ | |@LB@ 76 44@LB@@LB@@LB@Energy -13.87 kcal/mol@LB@Hybridization Energy -26.2723 kcal/mol@LB@Unfolding Energy - mRNA 8.66309 kcal/mol@LB@Unfolding Energy - sRNA 3.74078 kcal/mol@LB@@LB@Position - mRNA 230 -- 259@LB@Position - sRNA 45 -- 75@LB@Position Seed - mRNA 253 -- 259@LB@Position Seed - sRNA 45 -- 51@LB@ |
8 |
3.984e-05 |
0.01752 |
b2752 |
cysD |
-11.53 |
0.128779 |
103 -- 132 |
45 -- 74 |
sulfate adenylyltransferase subunit 2 |
|
_____________102____________________________133\n_____________|______________________________|\n5'-GCC...AAGGA_____U___UC_____G__AA_________UUCUC...UCU-3'\n______________ACUAC_CAU__UAAUU_GU__UUUCAUUCG\n______________|||||_||:__:||||_||__|||||:||:\n______________UGAUG_GUG__GUUAA_CA__AAAGUGAGU\n3'-UUU...GUUUC_____U___UC_____G__AC_________CCCCU...GCA-5'\n_____________|______________________________|\n_____________75_____________________________44\n |
126 -- 132 |
45 -- 51 |
-20.8412 kcal/mol |
5.57115 kcal/mol |
3.74056 kcal/mol |
102 133@LB@ | |@LB@5'-GCC...AAGGA U UC G AA UUCUC...UCU-3'@LB@ ACUAC CAU UAAUU GU UUUCAUUCG@LB@ ||||| ||: :|||| || |||||:||:@LB@ UGAUG GUG GUUAA CA AAAGUGAGU@LB@3'-UUU...GUUUC U UC G AC CCCCU...GCA-5'@LB@ | |@LB@ 75 44@LB@@LB@@LB@Energy -11.53 kcal/mol@LB@Hybridization Energy -20.8412 kcal/mol@LB@Unfolding Energy - mRNA 5.57115 kcal/mol@LB@Unfolding Energy - sRNA 3.74056 kcal/mol@LB@@LB@Position - mRNA 103 -- 132@LB@Position - sRNA 45 -- 74@LB@Position Seed - mRNA 126 -- 132@LB@Position Seed - sRNA 45 -- 51@LB@ |
47 |
0.001402 |
0.105 |
b2297 |
pta |
-18.38 |
0.002042 |
9 -- 40 |
45 -- 75 |
phosphate acetyltransferase |
|
_____________8__________________________________41\n_____________|__________________________________|\n___5'-CGCAACCU_________UUU______A__UG___________ACAAA...GUC-3'\n______________GGCUGCACG___CGGCAA_UC___GUUUCA_UCA\n______________|:||:|||:___|:||||_||___||||||_|||\n______________CUGAUGUGU___GUCGUU_AG___CAAAGU_AGU\n3'-UUU...CGUUU__________________A__CAA______G___CCCCU...GCA-5'\n_____________|__________________________________|\n_____________76_________________________________44\n |
11 -- 17 |
67 -- 73 |
-26.9548 kcal/mol |
4.83173 kcal/mol |
3.74078 kcal/mol |
8 41@LB@ | |@LB@ 5'-CGCAACCU UUU A UG ACAAA...GUC-3'@LB@ GGCUGCACG CGGCAA UC GUUUCA UCA@LB@ |:||:|||: |:|||| || |||||| |||@LB@ CUGAUGUGU GUCGUU AG CAAAGU AGU@LB@3'-UUU...CGUUU A CAA G CCCCU...GCA-5'@LB@ | |@LB@ 76 44@LB@@LB@@LB@Energy -18.38 kcal/mol@LB@Hybridization Energy -26.9548 kcal/mol@LB@Unfolding Energy - mRNA 4.83173 kcal/mol@LB@Unfolding Energy - sRNA 3.74078 kcal/mol@LB@@LB@Position - mRNA 9 -- 40@LB@Position - sRNA 45 -- 75@LB@Position Seed - mRNA 11 -- 17@LB@Position Seed - sRNA 67 -- 73@LB@ |
90 |
0.004009 |
0.1538 |
b3152 |
yraR |
-13.99 |
0.037452 |
47 -- 72 |
45 -- 75 |
putative nucleoside-diphosphate-sugar epimerase |
|
_____________46______________________________73\n_____________|_______________________________|\n5'-ACU...UCAGU_____AA___________UC___________UGCUU...CGA-3'\n______________GAUUA___ACGGCAAUUU______UUACUCA\n______________||:||___||:||||||:______|:|||||\n______________CUGAU___UGUCGUUAAG______AGUGAGU\n3'-UUU...CGUUU_____GUG__________CAACAA_______CCCCU...GCA-5'\n_____________|_______________________________|\n_____________76______________________________44\n |
66 -- 72 |
45 -- 51 |
-19.6514 kcal/mol |
1.92306 kcal/mol |
3.74078 kcal/mol |
46 73@LB@ | |@LB@5'-ACU...UCAGU AA UC UGCUU...CGA-3'@LB@ GAUUA ACGGCAAUUU UUACUCA@LB@ ||:|| ||:||||||: |:|||||@LB@ CUGAU UGUCGUUAAG AGUGAGU@LB@3'-UUU...CGUUU GUG CAACAA CCCCU...GCA-5'@LB@ | |@LB@ 76 44@LB@@LB@@LB@Energy -13.99 kcal/mol@LB@Hybridization Energy -19.6514 kcal/mol@LB@Unfolding Energy - mRNA 1.92306 kcal/mol@LB@Unfolding Energy - sRNA 3.74078 kcal/mol@LB@@LB@Position - mRNA 47 -- 72@LB@Position - sRNA 45 -- 75@LB@Position Seed - mRNA 66 -- 72@LB@Position Seed - sRNA 45 -- 51@LB@ |
118 |
0.005291 |
0.1553 |
b0481 |
ybaK |
-9.02 |
0.349126 |
203 -- 225 |
45 -- 75 |
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase |
|
_____________202_____________________________226\n_____________|_______________________________|\n5'-AAU...ACCAU______C______UAAA______________AAAAA...UCG-3'\n______________GAC_AC_CGCAGU___________UUACUCG\n______________|||_||_|:|||:___________|:||||:\n______________CUG_UG_GUGUCG___________AGUGAGU\n3'-UUU...CGUUU___A__U______UUAAGCAACAA_______CCCCU...GCA-5'\n_____________|_______________________________|\n_____________76______________________________44\n |
219 -- 225 |
45 -- 51 |
-15.8984 kcal/mol |
3.13427 kcal/mol |
3.74078 kcal/mol |
202 226@LB@ | |@LB@5'-AAU...ACCAU C UAAA AAAAA...UCG-3'@LB@ GAC AC CGCAGU UUACUCG@LB@ ||| || |:|||: |:||||:@LB@ CUG UG GUGUCG AGUGAGU@LB@3'-UUU...CGUUU A U UUAAGCAACAA CCCCU...GCA-5'@LB@ | |@LB@ 76 44@LB@@LB@@LB@Energy -9.02 kcal/mol@LB@Hybridization Energy -15.8984 kcal/mol@LB@Unfolding Energy - mRNA 3.13427 kcal/mol@LB@Unfolding Energy - sRNA 3.74078 kcal/mol@LB@@LB@Position - mRNA 203 -- 225@LB@Position - sRNA 45 -- 75@LB@Position Seed - mRNA 219 -- 225@LB@Position Seed - sRNA 45 -- 51@LB@ |
139 |
0.006425 |
0.1605 |
b0924 |
mukB |
-11.72 |
0.118276 |
203 -- 227 |
45 -- 75 |
chromosome condensin MukBEF ATPase and DNA-binding subunit |
|
_____________202_____________________________228\n_____________|_______________________________|\n5'-UGG...AUAAU_____A_________A_______________CUGAC...CUG-3'\n______________GAUUG_ACGCGGUAA_______UUUCGCUCA\n______________||:|:_||:|:|:||_______||||:||||\n______________CUGAU_UGUGUCGUU_______AAAGUGAGU\n3'-UUU...CGUUU_____G_________AAGCAAC_________CCCCU...GCA-5'\n_____________|_______________________________|\n_____________76______________________________44\n |
221 -- 227 |
45 -- 51 |
-22.3255 kcal/mol |
6.8688 kcal/mol |
3.74078 kcal/mol |
202 228@LB@ | |@LB@5'-UGG...AUAAU A A CUGAC...CUG-3'@LB@ GAUUG ACGCGGUAA UUUCGCUCA@LB@ ||:|: ||:|:|:|| ||||:||||@LB@ CUGAU UGUGUCGUU AAAGUGAGU@LB@3'-UUU...CGUUU G AAGCAAC CCCCU...GCA-5'@LB@ | |@LB@ 76 44@LB@@LB@@LB@Energy -11.72 kcal/mol@LB@Hybridization Energy -22.3255 kcal/mol@LB@Unfolding Energy - mRNA 6.8688 kcal/mol@LB@Unfolding Energy - sRNA 3.74078 kcal/mol@LB@@LB@Position - mRNA 203 -- 227@LB@Position - sRNA 45 -- 75@LB@Position Seed - mRNA 221 -- 227@LB@Position Seed - sRNA 45 -- 51@LB@ |
152 |
0.007399 |
0.1668 |
b0591 |
entS |
-13.87 |
0.039944 |
258 -- 287 |
45 -- 70 |
enterobactin exporter iron-regulated |
|
_____________257____________________________288\n_____________|______________________________|\n5'-AAU...CGUUU_________UUCC___CUC______U____AUUGU...UGG-3'\n______________CGCGCAGUA____UCG___GUUUCA_CUCA\n______________|:|:|||:|____|||___||||||_||||\n______________GUGUGUCGU____AGC___CAAAGU_GAGU\n3'-UUU...CUGAU_________UA_____AA____________CCCCU...GCA-5'\n_____________|______________________________|\n_____________71_____________________________44\n |
260 -- 266 |
62 -- 68 |
-23.1768 kcal/mol |
5.59312 kcal/mol |
3.71317 kcal/mol |
257 288@LB@ | |@LB@5'-AAU...CGUUU UUCC CUC U AUUGU...UGG-3'@LB@ CGCGCAGUA UCG GUUUCA CUCA@LB@ |:|:|||:| ||| |||||| ||||@LB@ GUGUGUCGU AGC CAAAGU GAGU@LB@3'-UUU...CUGAU UA AA CCCCU...GCA-5'@LB@ | |@LB@ 71 44@LB@@LB@@LB@Energy -13.87 kcal/mol@LB@Hybridization Energy -23.1768 kcal/mol@LB@Unfolding Energy - mRNA 5.59312 kcal/mol@LB@Unfolding Energy - sRNA 3.71317 kcal/mol@LB@@LB@Position - mRNA 258 -- 287@LB@Position - sRNA 45 -- 70@LB@Position Seed - mRNA 260 -- 266@LB@Position Seed - sRNA 62 -- 68@LB@ |