| 6 |
3.166e-05 |
0.01761 |
bsu12160 |
yjgC |
-18.77 |
0.004394 |
190 -- 206 |
10 -- 27 |
oxidoreductase |
bsu27220 bsu03310 |
_____________189________________207\n_____________|__________________|\n5'-UAA...AGAAA__________________GGCAA...UGC-3'\n______________GGGGAAUGGAGA_UGGCU\n______________||||||::||||_|:|||\n______________CCCCUUGUCUCU_AUCGA\n3'-UUU...CCCAA____________C_____AGAGA...AUA-5'\n_____________|__________________|\n_____________28_________________9\n |
192 -- 198 |
19 -- 25 |
-27.0798 kcal/mol |
2.28534 kcal/mol |
6.0284 kcal/mol |
189 207@LB@ | |@LB@5'-UAA...AGAAA GGCAA...UGC-3'@LB@ GGGGAAUGGAGA UGGCU@LB@ ||||||::|||| |:|||@LB@ CCCCUUGUCUCU AUCGA@LB@3'-UUU...CCCAA C AGAGA...AUA-5'@LB@ | |@LB@ 28 9@LB@@LB@@LB@Energy -18.77 kcal/mol@LB@Hybridization Energy -27.0798 kcal/mol@LB@Unfolding Energy - mRNA 2.28534 kcal/mol@LB@Unfolding Energy - sRNA 6.0284 kcal/mol@LB@@LB@Position - mRNA 190 -- 206@LB@Position - sRNA 10 -- 27@LB@Position Seed - mRNA 192 -- 198@LB@Position Seed - sRNA 19 -- 25@LB@ |
| 143 |
0.01244 |
0.2883 |
bsu13980 |
pbpH |
-18.09 |
0.006437 |
121 -- 135 |
29 -- 45 |
penicillin-binding enzyme for formation of rod-shaped peptidoglycan cell wall |
|
_____________120_______________136\n_____________|_________________|\n5'-UUU...UUGAA_________________AACCA...ACG-3'\n______________UGAUUUGA__GAGGGGU\n______________||||:|||__|||||||\n______________ACUAGACU__CUCCCCA\n3'-UUU...CUAGA________AU_______ACCCC...AUA-5'\n_____________|_________________|\n_____________46________________28\n |
129 -- 135 |
29 -- 35 |
-21.9726 kcal/mol |
2.91712 kcal/mol |
0.969832 kcal/mol |
120 136@LB@ | |@LB@5'-UUU...UUGAA AACCA...ACG-3'@LB@ UGAUUUGA GAGGGGU@LB@ ||||:||| |||||||@LB@ ACUAGACU CUCCCCA@LB@3'-UUU...CUAGA AU ACCCC...AUA-5'@LB@ | |@LB@ 46 28@LB@@LB@@LB@Energy -18.09 kcal/mol@LB@Hybridization Energy -21.9726 kcal/mol@LB@Unfolding Energy - mRNA 2.91712 kcal/mol@LB@Unfolding Energy - sRNA 0.969832 kcal/mol@LB@@LB@Position - mRNA 121 -- 135@LB@Position - sRNA 29 -- 45@LB@Position Seed - mRNA 129 -- 135@LB@Position Seed - sRNA 29 -- 35@LB@ |
| 153 |
0.01377 |
0.2994 |
bsu37510 |
pbpG |
-15.25 |
0.026855 |
95 -- 111 |
23 -- 38 |
penicillin-binding protein 2D |
|
_____________94_________________112\n_____________|__________________|\n5'-UGU...AAAGU_______AU__C______AAAAG...UGU-3'\n______________AUAGAGG__GG__GGGGA\n______________|||||||__||__|||||\n______________UAUCUCC__CC__CCCCU\n3'-UUU...UAGAC___________AA_____UGUCU...AUA-5'\n_____________|__________________|\n_____________39_________________22\n |
95 -- 101 |
32 -- 38 |
-18.2895 kcal/mol |
2.3676 kcal/mol |
0.66977 kcal/mol |
94 112@LB@ | |@LB@5'-UGU...AAAGU AU C AAAAG...UGU-3'@LB@ AUAGAGG GG GGGGA@LB@ ||||||| || |||||@LB@ UAUCUCC CC CCCCU@LB@3'-UUU...UAGAC AA UGUCU...AUA-5'@LB@ | |@LB@ 39 22@LB@@LB@@LB@Energy -15.25 kcal/mol@LB@Hybridization Energy -18.2895 kcal/mol@LB@Unfolding Energy - mRNA 2.3676 kcal/mol@LB@Unfolding Energy - sRNA 0.66977 kcal/mol@LB@@LB@Position - mRNA 95 -- 111@LB@Position - sRNA 23 -- 38@LB@Position Seed - mRNA 95 -- 101@LB@Position Seed - sRNA 32 -- 38@LB@ |
| 30 |
0.001001 |
0.1113 |
bsu08780 |
ygaJ |
-16.90 |
0.012052 |
218 -- 231 |
24 -- 39 |
peptidase YgaJ |
|
_____________217______________232\n_____________|________________|\n5'-UGU...AUUGC_________C______GUUUU...AGC-3'\n______________GAUGGGGGG___GGGG\n______________|||:|:|||___||||\n______________CUAUCUCCC___CCCC\n3'-UUU...CUAGA_________CAA____UUGUC...AUA-5'\n_____________|________________|\n_____________40_______________23\n |
220 -- 226 |
31 -- 37 |
-22.0746 kcal/mol |
4.38344 kcal/mol |
0.790436 kcal/mol |
217 232@LB@ | |@LB@5'-UGU...AUUGC C GUUUU...AGC-3'@LB@ GAUGGGGGG GGGG@LB@ |||:|:||| ||||@LB@ CUAUCUCCC CCCC@LB@3'-UUU...CUAGA CAA UUGUC...AUA-5'@LB@ | |@LB@ 40 23@LB@@LB@@LB@Energy -16.90 kcal/mol@LB@Hybridization Energy -22.0746 kcal/mol@LB@Unfolding Energy - mRNA 4.38344 kcal/mol@LB@Unfolding Energy - sRNA 0.790436 kcal/mol@LB@@LB@Position - mRNA 218 -- 231@LB@Position - sRNA 24 -- 39@LB@Position Seed - mRNA 220 -- 226@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 114 |
0.009837 |
0.2871 |
bsu30580 |
ytmA |
-11.73 |
0.116519 |
193 -- 212 |
33 -- 52 |
peptidase YtmA |
|
_____________192____________________213\n_____________|______________________|\n5'-AGA...GGAGG___CU_________________AAAAG...UGG-3'\n______________CGG__GUUUUGAUU__GUAGAG\n______________|||__:|:|||||:__:|||||\n______________GCC__UAGAACUAG__UAUCUC\n3'-UUU...AAAAA______________AC______CCCAA...AUA-5'\n_____________|______________________|\n_____________53_____________________32\n |
200 -- 206 |
41 -- 47 |
-17.5653 kcal/mol |
4.85678 kcal/mol |
0.976367 kcal/mol |
192 213@LB@ | |@LB@5'-AGA...GGAGG CU AAAAG...UGG-3'@LB@ CGG GUUUUGAUU GUAGAG@LB@ ||| :|:|||||: :|||||@LB@ GCC UAGAACUAG UAUCUC@LB@3'-UUU...AAAAA AC CCCAA...AUA-5'@LB@ | |@LB@ 53 32@LB@@LB@@LB@Energy -11.73 kcal/mol@LB@Hybridization Energy -17.5653 kcal/mol@LB@Unfolding Energy - mRNA 4.85678 kcal/mol@LB@Unfolding Energy - sRNA 0.976367 kcal/mol@LB@@LB@Position - mRNA 193 -- 212@LB@Position - sRNA 33 -- 52@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 41 -- 47@LB@ |
| 14 |
0.0002247 |
0.05257 |
bsu30160 |
ytcQ |
-17.33 |
0.009670 |
159 -- 223 |
10 -- 51 |
peptide ABC transporter substrate-binding protein |
|
_____________158__________________________________________________________________224\n_____________|____________________________________________________________________|\n5'-UUG...UGCUG___________AAAGGAUAAAGAAAUA___AAC________ACGA____A___AAAU___________UUUGA...GCA-3'\n______________GGAUCU__GUC________________UGA___GGAGGGGU____UGGG_AAC____GGAGGGU_GCU\n______________||||||__:||________________|||___:|||||||____||||_|||____:|||:||_|||\n______________CCUAGA__UAG________________ACU___UCUCCCCA____ACCC_UUG____UCUCUCA_CGA\n3'-UUU...AAAAG______AC______________________A__________________C______________U___AGAGA...AUA-5'\n_____________|____________________________________________________________________|\n_____________52___________________________________________________________________9\n |
214 -- 220 |
14 -- 20 |
-40.5 kcal/mol |
13.2168 kcal/mol |
9.95655 kcal/mol |
158 224@LB@ | |@LB@5'-UUG...UGCUG AAAGGAUAAAGAAAUA AAC ACGA A AAAU UUUGA...GCA-3'@LB@ GGAUCU GUC UGA GGAGGGGU UGGG AAC GGAGGGU GCU@LB@ |||||| :|| ||| :||||||| |||| ||| :|||:|| |||@LB@ CCUAGA UAG ACU UCUCCCCA ACCC UUG UCUCUCA CGA@LB@3'-UUU...AAAAG AC A C U AGAGA...AUA-5'@LB@ | |@LB@ 52 9@LB@@LB@@LB@Energy -17.33 kcal/mol@LB@Hybridization Energy -40.5 kcal/mol@LB@Unfolding Energy - mRNA 13.2168 kcal/mol@LB@Unfolding Energy - sRNA 9.95655 kcal/mol@LB@@LB@Position - mRNA 159 -- 223@LB@Position - sRNA 10 -- 51@LB@Position Seed - mRNA 214 -- 220@LB@Position Seed - sRNA 14 -- 20@LB@ |
| 144 |
0.01244 |
0.2883 |
bsu15720 |
def |
-10.99 |
0.152648 |
175 -- 193 |
31 -- 50 |
peptide deformylase |
|
_____________174___________________194\n_____________|_____________________|\n5'-GCG...UGUAA_____CAC_____________UAACA...AUG-3'\n______________GAUCU___GUCU__UGGAGGG\n______________|||||___:|||__|:|||||\n______________CUAGA___UAGA__AUCUCCC\n3'-UUU...AAAGC_____AC_____CU_______CAACC...AUA-5'\n_____________|_____________________|\n_____________51____________________30\n |
187 -- 193 |
31 -- 37 |
-18.0798 kcal/mol |
6.12249 kcal/mol |
0.970579 kcal/mol |
174 194@LB@ | |@LB@5'-GCG...UGUAA CAC UAACA...AUG-3'@LB@ GAUCU GUCU UGGAGGG@LB@ ||||| :||| |:|||||@LB@ CUAGA UAGA AUCUCCC@LB@3'-UUU...AAAGC AC CU CAACC...AUA-5'@LB@ | |@LB@ 51 30@LB@@LB@@LB@Energy -10.99 kcal/mol@LB@Hybridization Energy -18.0798 kcal/mol@LB@Unfolding Energy - mRNA 6.12249 kcal/mol@LB@Unfolding Energy - sRNA 0.970579 kcal/mol@LB@@LB@Position - mRNA 175 -- 193@LB@Position - sRNA 31 -- 50@LB@Position Seed - mRNA 187 -- 193@LB@Position Seed - sRNA 31 -- 37@LB@ |
| 107 |
0.009163 |
0.2778 |
bsu12780 |
xepA |
-15.86 |
0.020153 |
79 -- 99 |
29 -- 48 |
phage-like element PBSX protein XepA |
|
_____________78____________________100\n_____________|_____________________|\n5'-UUG...UCAAU__AG_______C______U__GAACA...UUU-3'\n______________UC__GAUCUGG_AGAGGG_GU\n______________||__||||||:_||||||_||\n______________AG__CUAGACU_UCUCCC_CA\n3'-UUU...AGCCU__AA_______A_________ACCCC...AUA-5'\n_____________|_____________________|\n_____________49____________________28\n |
83 -- 89 |
38 -- 44 |
-22.9588 kcal/mol |
6.12286 kcal/mol |
0.974361 kcal/mol |
78 100@LB@ | |@LB@5'-UUG...UCAAU AG C U GAACA...UUU-3'@LB@ UC GAUCUGG AGAGGG GU@LB@ || ||||||: |||||| ||@LB@ AG CUAGACU UCUCCC CA@LB@3'-UUU...AGCCU AA A ACCCC...AUA-5'@LB@ | |@LB@ 49 28@LB@@LB@@LB@Energy -15.86 kcal/mol@LB@Hybridization Energy -22.9588 kcal/mol@LB@Unfolding Energy - mRNA 6.12286 kcal/mol@LB@Unfolding Energy - sRNA 0.974361 kcal/mol@LB@@LB@Position - mRNA 79 -- 99@LB@Position - sRNA 29 -- 48@LB@Position Seed - mRNA 83 -- 89@LB@Position Seed - sRNA 38 -- 44@LB@ |
| 179 |
0.01703 |
0.3152 |
bsu08425 |
mprF |
-11.09 |
0.146985 |
133 -- 167 |
22 -- 52 |
phosphatidylglycerol lysyltransferase |
|
_____________132__________________________________168\n_____________|____________________________________|\n5'-ACU...AAUAA___UAG___UAUAA___GU_____AUUA________GAGGA...AUC-3'\n______________CGG____UG_____UGA__UGGAG____UUGGGGGA\n______________|||____||_____|||__|:|||____||||||:|\n______________GCC____AC_____ACU__AUCUC____AACCCCUU\n3'-UUU...AAAAA___UAGA__UAG____________CCC_________GUCUC...AUA-5'\n_____________|____________________________________|\n_____________53___________________________________21\n |
161 -- 167 |
22 -- 28 |
-20.3953 kcal/mol |
7.42087 kcal/mol |
1.8808 kcal/mol |
132 168@LB@ | |@LB@5'-ACU...AAUAA UAG UAUAA GU AUUA GAGGA...AUC-3'@LB@ CGG UG UGA UGGAG UUGGGGGA@LB@ ||| || ||| |:||| ||||||:|@LB@ GCC AC ACU AUCUC AACCCCUU@LB@3'-UUU...AAAAA UAGA UAG CCC GUCUC...AUA-5'@LB@ | |@LB@ 53 21@LB@@LB@@LB@Energy -11.09 kcal/mol@LB@Hybridization Energy -20.3953 kcal/mol@LB@Unfolding Energy - mRNA 7.42087 kcal/mol@LB@Unfolding Energy - sRNA 1.8808 kcal/mol@LB@@LB@Position - mRNA 133 -- 167@LB@Position - sRNA 22 -- 52@LB@Position Seed - mRNA 161 -- 167@LB@Position Seed - sRNA 22 -- 28@LB@ |
| 67 |
0.004159 |
0.2071 |
bsu31830 |
yueE |
-13.48 |
0.058566 |
169 -- 197 |
28 -- 51 |
phosphohydrolase YueE |
|
_____________168___________________________198\n_____________|_____________________________|\n5'-UAG...UGUUA___U___AAAAAU____AAA_________UCCAU...AUG-3'\n______________GGA_UCU______AUCU___GGAGGGGUU\n______________|||_|||______||||___:||||||||\n______________CCU_AGA______UAGA___UCUCCCCAA\n3'-UUU...AAAAG_______AC________CUA_________CCCCU...AUA-5'\n_____________|_____________________________|\n_____________52____________________________27\n |
191 -- 197 |
28 -- 34 |
-19.6632 kcal/mol |
5.21125 kcal/mol |
0.974859 kcal/mol |
168 198@LB@ | |@LB@5'-UAG...UGUUA U AAAAAU AAA UCCAU...AUG-3'@LB@ GGA UCU AUCU GGAGGGGUU@LB@ ||| ||| |||| :||||||||@LB@ CCU AGA UAGA UCUCCCCAA@LB@3'-UUU...AAAAG AC CUA CCCCU...AUA-5'@LB@ | |@LB@ 52 27@LB@@LB@@LB@Energy -13.48 kcal/mol@LB@Hybridization Energy -19.6632 kcal/mol@LB@Unfolding Energy - mRNA 5.21125 kcal/mol@LB@Unfolding Energy - sRNA 0.974859 kcal/mol@LB@@LB@Position - mRNA 169 -- 197@LB@Position - sRNA 28 -- 51@LB@Position Seed - mRNA 191 -- 197@LB@Position Seed - sRNA 28 -- 34@LB@ |
