STM3567 |
-51 |
-28 |
-45 |
-39 |
4.12 |
GcvB |
63 |
87 |
75 |
81 |
7.58 |
-15.35 |
-27.05 |
-1.48828 |
AACACCACAACACACGUAACAACC&GGUUGUGAUGUUGUGUUGUUGUGUU |
(((((.(((((((((((.((((((&)))))).)))).))))))).))))) |
AAUCGAAAUAAAGUGCUGAACAAUAACACCACAACACACGUAACAACCAGAAUAAUGGGGAUUAUCAGGAUGAAUAUGAAGGGUAAAACGUUAUUGGCAGGAUGUAUCGCCCUGUCAUUAAGCCAUAUGGCAUUCGCCGACGACAUUAAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0076089 |
0.7711365 |
livJ |
1255090 |
high-affinity branched-chain amino acid transporter |
STM1743 |
-4 |
21 |
9 |
15 |
7.67 |
GcvB |
35 |
59 |
41 |
47 |
5.79 |
-18.01 |
-31.47 |
-1.74618 |
AGCCAUGAGCUUAUCAGAAACCGCA&UGCGUGUUCUGAUGGGCUUUUGGCU |
(((((..((((((((((((..((((&))))..))))))))))))..))))) |
GUUAUUCUGUUUUAACUUUAUUGGCGAUGGCCUGCGUGAUGCCCUCGACCCGAAAGAUCGUUAAGGAGUACAGCCAUGAGCUUAUCAGAAACCGCAACUCAGGCGCCGCAACCGGCGAAUGUACUGCUGGAGGUAAACGAUCUUCGUGUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0011849 |
0.4343002 |
oppD |
1253262 |
oligopeptide ABC transporter ATP-binding protein OppD |
STM1129 |
-11 |
38 |
28 |
34 |
12.17 |
GcvB |
139 |
186 |
143 |
149 |
8.7 |
-15.3 |
-36.17 |
-1.48343 |
GGCGGAACUGGAUGUCACUAUUAGCCAGGCUGGAACAAAGUGUACACGA&UCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCC |
(((((..((..((.(((((((....(((((.((....(((((((((.((&)).)))))))))..)).)))))...)))))))...))..))..))))) |
UUUUGCUUGAUGUAGCAACACUCCAAGACAUAACAUAAAACGGAGCAAAACUUCAAAUAUAUAAGGCGGAACUGGAUGUCACUAUUAGCCAGGCUGGAACAAAGUGUACACGAAAACGGUGGGCUGAUUGUCUCAUGCCAACCGGUACCA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0078548 |
0.7711365 |
|
1252647 |
N-acetylmannosamine-6-phosphate 2-epimerase |
STM1871 |
-72 |
-28 |
-46 |
-40 |
5.98 |
GcvB |
143 |
187 |
154 |
160 |
6.86 |
-14.41 |
-27.25 |
-1.39714 |
UGGCGAUACAGGACAGGAAAUUACAACGGACGGUGGAUCAGGUAC&GUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCA |
(((((.......(((...((((((.((((((((.((.....((((&)))).....)))))))))).....))))))..))).....))))) |
GGCUGGCGAUACAGGACAGGAAAUUACAACGGACGGUGGAUCAGGUACAACUUCAUAGCGCAAAACCACACGCCAGUGGCGCUUAUUGAAAAACUAAAAGGAACGGACUCAUUCACUGUGUCCGCAUGGAUUGAUCGCUAUGAGGUUUUA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0136032 |
0.7904009 |
|
1253392 |
putative phage integrase protein |
STM3257 |
-68 |
-44 |
-63 |
-57 |
1.65 |
GcvB |
46 |
81 |
70 |
76 |
9.96 |
-13.98 |
-25.59 |
-1.35545 |
ACAAAACAACAUUACGAAAGCCUAU&AUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
((((.((((((((((((((((((((&))))))))...........)))))))))))).)))) |
CAAAAUCACAAAACAACAUUACGAAAGCCUAUAAAUUCUUUCGAAGAAGAAAAACGAAAGAACUCGGAGAUAAAAGUGAAAGAAAUAAUUGCUCGUCAUAAAGCAGGAGAACAUCUGGGCAUCUGUUCAGUUUGUUCUGCUCAUCCCCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0175423 |
0.8300455 |
|
1254780 |
D-tagatose-16-bisphosphate aldolase subunit GatZ |
STM2801 |
35 |
49 |
42 |
48 |
3.54 |
GcvB |
151 |
164 |
152 |
158 |
1.44 |
-15.18 |
-20.16 |
-1.47179 |
UGGAAAAGGCAGGGU&ACCCUGUCUGUCCA |
((((..(((((((((&))))))))).)))) |
UGGACUUUUCUGAAAGCGUUGAUAACGCGCUAUCGGGUAAGGUAAGCCCGCAGUACAAGAGAAUGAGGAUAAAAUAUGUAUUUACGACCUGACGAGGUGGCGCGGGUACUGGAAAAGGCAGGGUUUACCGUCGAUGUGGUGACGAAUAAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0084743 |
0.7799855 |
ygaC |
1254324 |
similar to E. coli orf hypothetical protein (AAC75718.1) Blastp hit to AAC75718.1 (114 aa) 88% identity in aa 1 - 112 |
STM1282 |
56 |
70 |
64 |
70 |
2.38 |
GcvB |
36 |
50 |
36 |
42 |
5.56 |
-14.86 |
-22.8 |
-1.44077 |
CCCAGGAGAACGCGC&GCGUGUUCUGAUGGG |
((((..(((((((((&)))))))))..)))) |
AACAAAAACAACAUCGUUCAUCAUAGUGCUUCGCAGUAAAUGUUCAUAUUGCACCAGGAGUGAGAAAUGGCCGAAAUGACUGAAGUCGCGAAGGGUGUCGCUACACACCAACGUUUAGUGGCUUUAUUAACCCAGGAGAACGCGCGCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0103458 |
0.7883581 |
yeaK |
1252800 |
putative cytoplasmic protein |
STM3665 |
-33 |
-19 |
-27 |
-21 |
0.57 |
GcvB |
154 |
169 |
156 |
162 |
2.34 |
-15.78 |
-18.69 |
-1.52997 |
CACUUUGACAGACAG&CUGUCUGUCCAUAGUG |
((((..(((((((((&)))))))))...)))) |
GACCCCCAUUUGCGCCCCGCCAUUUGUAGCGUUAUGGUUAUCCACUUUGACAGACAGUUCGAUAGAUCACCCGUUAUGACAUUUUCACUUUUCGGCGAUAAAUUUACCCGCCAUUCAGGCAUUACCCGCCUGAUGGAGGAUCUCAACGAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0057627 |
0.7419678 |
avtA |
1255189 |
valine--pyruvate transaminase |
STM0670 |
-75 |
-37 |
-67 |
-61 |
8.3 |
GcvB |
36 |
78 |
63 |
69 |
10.84 |
-14.61 |
-33.75 |
-1.41653 |
AUACUGGUCACAACCGCGCCAAAGCAUUACACUAUGCGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGU |
((((...(((((((((.((((((((....((..((((((&))))))..))....)))).))))...)))))))))....)))) |
AUACUGGUCACAACCGCGCCAAAGCAUUACACUAUGCGCCCUGCUUUUCAGCCACUAUUUCGCAAGAGCAAGUCGAUGACUAAAAAACUCCAUAUUAAAACCUGGGGCUGUCAGAUGAACGAGUACGAUUCAUCGAAGAUGGCCGAUCUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0120567 |
0.7904009 |
miaB |
1252190 |
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB |
STM3083 |
-36 |
-6 |
-13 |
-7 |
4.19 |
GcvB |
130 |
160 |
131 |
137 |
6.26 |
-15.04 |
-25.49 |
-1.45822 |
CAGAAUUGGUAAACAAAACAGGAGUGGGAAA&UUUUUCACUUCCUGUACAUUUACCCUGUCUG |
((((...((((((....((((((((((((((&)))))))).))))))...))))))...)))) |
AGUGUGAUCAUAUUCACGGAUUUUGGUAUGGUGUUUAAGCAGAAUUGGUAAACAAAACAGGAGUGGGAAAAAUUCAUGGACACCAUAGCUCGCCAGUUAGACGCCGCAAGGCACCAAUUCAAAACGACUUAUUCACGUCAGGGAAUGGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.009252 |
0.7883581 |
|
1254606 |
fructuronate reductase |