STM0900 |
-48 |
-8 |
-15 |
-9 |
13.44 |
GcvB |
36 |
81 |
37 |
43 |
10.87 |
-14.38 |
-38.69 |
-1.39423 |
ACAAUGCUGACCAUCACGCCAAAUUUUGCCCAGGAACGCGC&GCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
(((((((....((((((((((((....(((((.((((((((&))))))))...))))).))))))........))))))..))))))) |
UCAUUAUCGCAUCGAUAUGGGGGCUGGACAAUGCUGACCAUCACGCCAAAUUUUGCCCAGGAACGCGCGCUGAACAUGCUGCGCCGCGACUGGAAGUCGCAUAAUACUUUUAUGGUGUAUGCACCCACUGGCAGCGGCAAAACGGGGUUA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0138499 |
0.7904009 |
|
1252419 |
putative Fels-1 prophage DNA or RNA helicases of superfamily II |
STM2573 |
-66 |
-17 |
-37 |
-31 |
7.72 |
GcvB |
42 |
84 |
53 |
59 |
12.2 |
-13.97 |
-33.89 |
-1.35448 |
AUAACGAAAAAAUAUGUCGCAACGGUUUUAGCCAAAAUUCAUUAAUCAGA&UCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGU |
(((((((......((((((((((.((...((((((((.......((((((&))))))....)))))))).)).))))))))))....))))))) |
UUGACCCUGAUAACGAAAAAAUAUGUCGCAACGGUUUUAGCCAAAAUUCAUUAAUCAGAUAAUAAGGAAAUAAAAAUGAAAAUUGCAAUCGCAGGUGCAGGCGCUAUGGGAUGUCGUUUUGGCUAUAUGCUGCUGGAGGCCGGGCACGAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0176449 |
0.8300455 |
|
1254095 |
2-dehydropantoate 2-reductase |
STM2384 |
-30 |
-16 |
-22 |
-16 |
0.56 |
GcvB |
77 |
90 |
77 |
83 |
3.93 |
-14.64 |
-19.13 |
-1.41944 |
GCAAACGACAACAAC&GUUGUUGUGUUUGC |
((((((.((((((((&)))))))))))))) |
GCUCGCGGCCCGUGAACAUUUCAAUAUUUAUAAAGAUUAAAACACGCAAACGACAACAACGAUAACGGAGCCGUGAUGGCAGGAAACACAAUUGGACAACUCUUUCGCGUAACCACUUUCGGCGAAUCACACGGGCUGGCGCUUGGGUGU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0118389 |
0.7904009 |
aroC |
1253906 |
chorismate synthase |
STM3574 |
-53 |
-35 |
-43 |
-37 |
7.7 |
GcvB |
150 |
169 |
152 |
158 |
2.39 |
-15.48 |
-25.57 |
-1.50088 |
CACUAUAACGGGCAGGGUA&UACCCUGUCUGUCCAUAGUG |
((((((.((((((((((((&))))))))))))..)))))) |
GGCCGUGACGGUCAGAUGACAACACUAUAACGGGCAGGGUAUGCUUAUUUCCGCAUUUUCUGACAGGUUAACAGUAUGAGUAAGCCACCGCUUUUCUUCAUUAUAAUCAUUGCAUUAAUCGUAGUUGCCGCGUCGUUCCGCUUCGUUCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0070016 |
0.7528387 |
yhhM |
1255097 |
similar to E. coli putative receptor (AAC76492.1) Blastp hit to AAC76492.1 (119 aa) 84% identity in aa 1 - 116 |
STM1524 |
-72 |
-45 |
-52 |
-46 |
2.44 |
GcvB |
148 |
177 |
149 |
155 |
4.5 |
-15.64 |
-22.58 |
-1.51639 |
AUAUUAUUCAUUUUUCAGAAAGGGUAAA&UUUACCCUGUCUGUCCAUAGUGAUUAAUGU |
((((((.(((((...((((.((((((((&)))))))).)))).....))))).)))))) |
UUAAUAUUAUUCAUUUUUCAGAAAGGGUAAAGGGCGUCAUGAUGGUACAACUCCCCUGAUAACGAGAGAAAGAACAUGACCAUGAUGACUGCAACACAGGCGUUAUCCGUGAAUCCUGCGACCGGCCAGACGCUGGCGGCAAUGCCCUGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.006314 |
0.7419678 |
yneI |
1253042 |
putative succinate-semialdehyde dehydrogenase |
STM3251 |
-5 |
39 |
5 |
11 |
7.81 |
GcvB |
45 |
87 |
72 |
78 |
12.16 |
-20.16 |
-40.13 |
-1.95464 |
AACGCAUGAACAUAACAAUCGCAACAUUGGGUGAAUUGCUCGUC&GAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUU |
((((((..(((((((((.(((((((..((((..((..(((((((&)))))))..))..))))..))))))))))))))))..)))))) |
CCAACAGCUAUACCAAUAACGAAUGUCUGACCUGGAUAAACCCGACCCUGCAUCAGGCAAGAUGAAGGACAACGCAUGAACAUAACAAUCGCAACAUUGGGUGAAUUGCUCGUCGAGUUUCUGGCAAAAAAAGAGAACCAGGGAUUUUCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0001949 |
0.2200421 |
|
1254774 |
sugar kinase |
STM1822 |
43 |
69 |
62 |
68 |
6.4 |
GcvB |
162 |
185 |
163 |
169 |
6.16 |
-14.36 |
-26.92 |
-1.39229 |
GUGGUGAUCUACAAUAAUACGCUGUGG&CCAUAGUGAUUAAUGUAGCACCGC |
((((((..(((((.((((.((((((((&)))))))))))).))))))))))) |
GUUACAGAGGUGACGGCGGCGCCACAUUGUGGCAGUCUUGAACCAUUCAAAUGAAAAGCAAAUGAGGAAUAAGUAAUGUCUAUCGUGCGUAUUGAUGCCGAAGAUCGUUGGUCAGACGUGGUGAUCUACAAUAAUACGCUGUGGUAUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0140165 |
0.7904009 |
yoaB |
1253341 |
similar to E. coli orf hypothetical protein (AAC74879.1) Blastp hit to AAC74879.1 (130 aa) 92% identity in aa 17 - 130 |
STM0330 |
-25 |
-8 |
-14 |
-8 |
4.13 |
GcvB |
152 |
170 |
152 |
158 |
2.51 |
-14.16 |
-20.8 |
-1.3729 |
UCAUUACUUCAGGCAGGG&CCCUGUCUGUCCAUAGUGA |
((((((...(((((((((&)))))))))....)))))) |
CGGCGAUGGUUGCGGCGGCGGCGGUAGCGGGGCAUCUGGUCGAUGUUCGGUCAUUACUUCAGGCAGGGGAAUAAGAUGGAUACGUUUAAGCAAAUCAGCGGGCGAAUUGCGCCGAUGCUGGAACCGAAUAUCGACACUGAUGUGAUUAUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0157842 |
0.7979576 |
|
1251849 |
3-isopropylmalate dehydratase small subunit |
STM0689 |
-9 |
15 |
5 |
11 |
2.15 |
GcvB |
66 |
90 |
71 |
77 |
6.6 |
-16.13 |
-24.88 |
-1.5639 |
GCAAACCCUAUGGCACAACACACA&UGUGAUGUUGUGUUGUUGUGUUUGC |
((((((...(((((((((((((((&)))).)))))))))))...)))))) |
ACAUGCGGGGGAUACAGGCAACUGACCCGCAACAUCUUACCCAUAAAACAAUAAAGACAGUGGAGAGCAAACCCUAUGGCACAACACACACCUGCAACAUCGCGCGCCGGCACGUUCGGCGCAAUACUGCGCGUGACAAGCGGCAAUUUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0045687 |
0.6975035 |
citA |
1252209 |
citrate-proton symporter |
STM0604 |
4 |
22 |
15 |
21 |
2.05 |
GcvB |
62 |
80 |
63 |
69 |
6.09 |
-15.71 |
-23.85 |
-1.52318 |
CAACACCGACUCACAACCG&CGGUUGUGAUGUUGUGUUG |
(((((.(((((((((((((&))))))))).))))))))) |
CAGUCCGACAAAACCUAAGAAUUACCAGCGUUAUAACGAACGUAUGAAAGCUAAACGCCAGGAAUGGGGGAUCUUAUGCAACACCGACUCACAACCGAAAUAACUCACUUUCUCUCUGAACUGCCUGAAGAGGAGAGGAUCGCCGCCAUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0060327 |
0.7419678 |
ybdM |
1252124 |
similar to E. coli orf hypothetical protein (AAC73702.1) Blastp hit to AAC73702.1 (209 aa) 77% identity in aa 5 - 209 |