STM1179 |
22 |
44 |
38 |
44 |
7.1 |
GcvB |
35 |
58 |
35 |
41 |
5.79 |
-16.06 |
-28.95 |
-1.55712 |
GCCAAAACCGGUCUGGACGCGCA&UGCGUGUUCUGAUGGGCUUUUGGC |
(((((((((..((.(((((((((&))))))))).))..)).))))))) |
AGGUUAUCACCAGCGUAGAUGAGAACGAAGGGCGAGCUAACCAACUGCUGUCGAUGAGUUAAUACAGGACAUUUUAUGAUCAGUUCAUUAUGGAUCGCCAAAACCGGUCUGGACGCGCAGCAAACCAAUAUGGAUGUGAUUGCCAAUAAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.004788 |
0.6975035 |
flgG |
1252697 |
flagellar basal-body rod protein FlgG |
STM2909 |
41 |
74 |
68 |
74 |
7.52 |
GcvB |
47 |
83 |
47 |
53 |
11.67 |
-16.31 |
-35.5 |
-1.58135 |
CGAUGAUGCAGCAGUAUCUCAAGCUGAAAGCCCA&UGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUG |
(((((((((((((..(((..((((((((((((((&))))))))))))))..))).....))))))))))))) |
UUUAUGUGAGUUUAUAAGGGUUUUACCUGGGGCCACAUGAGCACUUGAAAGAAUAAAAAAACGAGUAAAAUCAAUAUGAAUGAGUCAUUUGAUAAGGACUUCUCCAACCACACCCCGAUGAUGCAGCAGUAUCUCAAGCUGAAAGCCCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0040457 |
0.6975035 |
mutS |
1254432 |
DNA mismatch repair protein MutS |
STM1057 |
1 |
43 |
4 |
10 |
7.59 |
GcvB |
37 |
81 |
72 |
78 |
10.7 |
-14.2 |
-32.49 |
-1.37678 |
AUGACACAACAGCCACAAGCCAAAUACCGCCAUGACUAUCGCG&CGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGU |
(((((((((((..(((((((((((.....((((......((((&)))).....))))...)))))))......)))).))))))))))) |
AUUCUGCGUAGCGCGAUUUGCGCAACAGGAAUAGACUGGAGUCGACACUCUACACAAAGAUGCGAAAGGUUUUUUAUGACACAACAGCCACAAGCCAAAUACCGCCAUGACUAUCGCGCGCCGGAUUACCAGAUUACUGAUAUUGACUUG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0154155 |
0.7979576 |
pepN |
1252575 |
aminopeptidase N |
STM1743 |
-4 |
21 |
9 |
15 |
7.67 |
GcvB |
35 |
59 |
41 |
47 |
5.79 |
-18.01 |
-31.47 |
-1.74618 |
AGCCAUGAGCUUAUCAGAAACCGCA&UGCGUGUUCUGAUGGGCUUUUGGCU |
(((((..((((((((((((..((((&))))..))))))))))))..))))) |
GUUAUUCUGUUUUAACUUUAUUGGCGAUGGCCUGCGUGAUGCCCUCGACCCGAAAGAUCGUUAAGGAGUACAGCCAUGAGCUUAUCAGAAACCGCAACUCAGGCGCCGCAACCGGCGAAUGUACUGCUGGAGGUAAACGAUCUUCGUGUU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0011849 |
0.4343002 |
oppD |
1253262 |
oligopeptide ABC transporter ATP-binding protein OppD |
STM0470 |
27 |
75 |
69 |
75 |
7.67 |
GcvB |
38 |
91 |
38 |
44 |
13.89 |
-14.3 |
-35.86 |
-1.38647 |
UGCAAAACAACGGCAUCCGGAUUGCCAGAUAGUCAAACGCAAAGGACGC&GUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCA |
(((((((((((((((.(((....((((((.((((........(((((((&)))))))....))))))))))...)))...........))))))))).)))))) |
UGAUAGCGAAAGUAGCGCCGCACGCUUCCAGAAACGUUUCGGUCAUUUUAUCGGCGCUAAACGGGGGUAAAUGAAAUGCAGGUGUUAAACUCACUUCGCAAUGCAAAACAACGGCAUCCGGAUUGCCAGAUAGUCAAACGCAAAGGACGC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0145273 |
0.7904009 |
rpmJ2 |
1251990 |
50S ribosomal protein L36 |
STM3574 |
-53 |
-35 |
-43 |
-37 |
7.7 |
GcvB |
150 |
169 |
152 |
158 |
2.39 |
-15.48 |
-25.57 |
-1.50088 |
CACUAUAACGGGCAGGGUA&UACCCUGUCUGUCCAUAGUG |
((((((.((((((((((((&))))))))))))..)))))) |
GGCCGUGACGGUCAGAUGACAACACUAUAACGGGCAGGGUAUGCUUAUUUCCGCAUUUUCUGACAGGUUAACAGUAUGAGUAAGCCACCGCUUUUCUUCAUUAUAAUCAUUGCAUUAAUCGUAGUUGCCGCGUCGUUCCGCUUCGUUCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0070016 |
0.7528387 |
yhhM |
1255097 |
similar to E. coli putative receptor (AAC76492.1) Blastp hit to AAC76492.1 (119 aa) 84% identity in aa 1 - 116 |
STM2573 |
-66 |
-17 |
-37 |
-31 |
7.72 |
GcvB |
42 |
84 |
53 |
59 |
12.2 |
-13.97 |
-33.89 |
-1.35448 |
AUAACGAAAAAAUAUGUCGCAACGGUUUUAGCCAAAAUUCAUUAAUCAGA&UCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGU |
(((((((......((((((((((.((...((((((((.......((((((&))))))....)))))))).)).))))))))))....))))))) |
UUGACCCUGAUAACGAAAAAAUAUGUCGCAACGGUUUUAGCCAAAAUUCAUUAAUCAGAUAAUAAGGAAAUAAAAAUGAAAAUUGCAAUCGCAGGUGCAGGCGCUAUGGGAUGUCGUUUUGGCUAUAUGCUGCUGGAGGCCGGGCACGAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0176449 |
0.8300455 |
|
1254095 |
2-dehydropantoate 2-reductase |
STM3251 |
-5 |
39 |
5 |
11 |
7.81 |
GcvB |
45 |
87 |
72 |
78 |
12.16 |
-20.16 |
-40.13 |
-1.95464 |
AACGCAUGAACAUAACAAUCGCAACAUUGGGUGAAUUGCUCGUC&GAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUU |
((((((..(((((((((.(((((((..((((..((..(((((((&)))))))..))..))))..))))))))))))))))..)))))) |
CCAACAGCUAUACCAAUAACGAAUGUCUGACCUGGAUAAACCCGACCCUGCAUCAGGCAAGAUGAAGGACAACGCAUGAACAUAACAAUCGCAACAUUGGGUGAAUUGCUCGUCGAGUUUCUGGCAAAAAAAGAGAACCAGGGAUUUUCC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0001949 |
0.2200421 |
|
1254774 |
sugar kinase |
STM1287 |
4 |
34 |
28 |
34 |
7.83 |
GcvB |
47 |
79 |
47 |
53 |
9.82 |
-14.28 |
-31.93 |
-1.38453 |
AGCAUAGUAUUCAAUACCGUAGCCAAGCCCA&UGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUU |
((((((((((.((..((((((((((((((((&)))))))..))).))))))..)))))))))))) |
UGUUGCAAUGCUGGCUGAUAUCGCCCUGUCACGUCCCGCUUAUGCUAUACCCAUUCUUCACAGCGAGUAAGACGAAUGAGCAUAGUAUUCAAUACCGUAGCCAAGCCCAGCGGCAGUCUGUGUAACUUAUCCUGCAAGUACUGUUUCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0147012 |
0.7904009 |
|
1252805 |
anaerobic sulfatase maturase |
STM1257 |
-35 |
-12 |
-32 |
-26 |
7.95 |
GcvB |
166 |
189 |
180 |
186 |
6.29 |
-13.92 |
-28.16 |
-1.34963 |
UGUGGUGGUGCUUAAUCGAUCGCU&AGUGAUUAAUGUAGCACCGCCAUA |
((((((((((((..((..((((((&))))))..))..)))))))))))) |
CACUAUUAGUGUUUGCCGGAAAUACGAUUUCAGCCUGGCUUGUGGUGGUGCUUAAUCGAUCGCUGGAGCGUCCCGAUGCUCUAUAAUCCUGCCCCGACGUUGUUUCGUCUGCUCCUCUCCGUUACCUGUCUGCUGUUUAUUGCCGGAUAC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.018166 |
0.8371189 |
|
1252775 |
peptide ABC transporter permease |