STM1282 |
56 |
70 |
64 |
70 |
2.38 |
GcvB |
36 |
50 |
36 |
42 |
5.56 |
-14.86 |
-22.8 |
-1.44077 |
CCCAGGAGAACGCGC&GCGUGUUCUGAUGGG |
((((..(((((((((&)))))))))..)))) |
AACAAAAACAACAUCGUUCAUCAUAGUGCUUCGCAGUAAAUGUUCAUAUUGCACCAGGAGUGAGAAAUGGCCGAAAUGACUGAAGUCGCGAAGGGUGUCGCUACACACCAACGUUUAGUGGCUUUAUUAACCCAGGAGAACGCGCGCUAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0103458 |
0.7883581 |
yeaK |
1252800 |
putative cytoplasmic protein |
STM2179 |
-46 |
-27 |
-33 |
-27 |
2.39 |
GcvB |
69 |
90 |
69 |
75 |
6.4 |
-14.7 |
-23.49 |
-1.42526 |
GCAAACAUAAAAACAACAUC&GAUGUUGUGUUGUUGUGUUUGC |
((((((((((..((((((((&))))))))....)))))))))) |
UAUCGCUCACUCUACAAACUCGUAACAUAGCAAACAUAAAAACAACAUCUAUCUCCCUGCACUGAGGCAUUAGCUAUGACUCAACGACGUGAUCUACAAGCCCUUAUUGAUGCCGCGCCCGUCGGCAAAAUGCAGUGGCGCGUUAUCAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0114137 |
0.7904009 |
|
1253701 |
4-hydroxybenzoate transporter |
STM0022 |
-74 |
-55 |
-63 |
-57 |
2.39 |
GcvB |
127 |
147 |
129 |
135 |
5.89 |
-14.36 |
-22.64 |
-1.39229 |
UGUUGGGAGGCGAGAAAGGG&CCCUUUUUCACUUCCUGUACA |
(((..(((((.(((((((((&))))))))).)))))...))) |
CUGUUGGGAGGCGAGAAAGGGGCGUUACGCGCGUCACUGCGCGUAACAAACCGACGGCAUCAGGAUAUUACGCAGAUGAAAAAAAACGUACCGAUUUUCCUUCGAUUAUUGCUACUGCUGUCGGCGGCCGGCCUGUCGUUUGCCGCGCAG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0140165 |
0.7904009 |
bcfB |
1251540 |
fimbrial chaperone protein |
STM0532 |
-28 |
7 |
-7 |
-1 |
2.42 |
GcvB |
131 |
164 |
138 |
144 |
7.56 |
-14.18 |
-24.16 |
-1.37484 |
UGGACAACAAAUAGUAAAAGGAUAGGGAAUGAAAA&UUUUCACUUCCUGUACAUUUACCCUGUCUGUCCA |
(((((((((....(((((...(((((((.((((((&)))))).)))))))...)))))..))).)))))) |
GCGCUGGGGCACACCUCUGGUGCGGAUACGCUGCUGGGGUUCUGGCUUGGACAACAAAUAGUAAAAGGAUAGGGAAUGAAAACGUUGGUAGUUGCUCUUGGCGGCAACGCAUUAUUGCAGCGCGGAGAAGCGCUAACGGCAGAGAAUCAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0155989 |
0.7979576 |
arcC |
1252052 |
putative carbamate kinase |
STM1524 |
-72 |
-45 |
-52 |
-46 |
2.44 |
GcvB |
148 |
177 |
149 |
155 |
4.5 |
-15.64 |
-22.58 |
-1.51639 |
AUAUUAUUCAUUUUUCAGAAAGGGUAAA&UUUACCCUGUCUGUCCAUAGUGAUUAAUGU |
((((((.(((((...((((.((((((((&)))))))).)))).....))))).)))))) |
UUAAUAUUAUUCAUUUUUCAGAAAGGGUAAAGGGCGUCAUGAUGGUACAACUCCCCUGAUAACGAGAGAAAGAACAUGACCAUGAUGACUGCAACACAGGCGUUAUCCGUGAAUCCUGCGACCGGCCAGACGCUGGCGGCAAUGCCCUGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.006314 |
0.7419678 |
yneI |
1253042 |
putative succinate-semialdehyde dehydrogenase |
STM3527 |
-66 |
-47 |
-54 |
-48 |
2.5 |
GcvB |
139 |
163 |
140 |
146 |
4.45 |
-14.85 |
-21.8 |
-1.4398 |
GGACAACAGUUGGUGCAGGA&UCCUGUACAUUUACCCUGUCUGUCC |
(((((((((...((((((((&)))))))).......)))).))))) |
AGCCCGCAGGGACAACAGUUGGUGCAGGAUGUGGGAUAUGUGCCGCUGUAUCCGGCCGCGAAAUAAAGGGACUAAAUGGAAGAGGUUAAAUUAUAUGUGGAACGGGUUGGCAUAGACCCGGCCAGCGGCGCUGAUAUUCGUAUUGCACGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0104098 |
0.7883581 |
|
1255050 |
similar to E. coli orf hypothetical protein (AAC73602.1) Blastp hit to AAC73602.1 (86 aa) 35% identity in aa 21 - 85 |
STM1715 |
-75 |
-43 |
-52 |
-46 |
2.7 |
GcvB |
42 |
71 |
45 |
51 |
9.85 |
-16.36 |
-28.91 |
-1.5862 |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGA&UCUGAUGGGCUUUUGGCUUACGGUUGUGAU |
((((.....(((((((.......((((((((((&))))))))))......)))))))...)))) |
AUCAAUUUCCUGUGAGAAUAUUUGCCCAUCAGAAGUGCUCAGCGUAGACUAAUCUCCUUGUUUAAGGAGUAAAAAAUGCAUAAAGAGACGCAACCUAUCGAUCGCGAAACACUGUUGCUUGAAGCCAACAAAAUUAUUCGGGAACAUGAA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0039103 |
0.6975035 |
yciN |
1253234 |
similar to E. coli orf hypothetical protein (AAC74355.1) Blastp hit to AAC74355.1 (83 aa) 92% identity in aa 1 - 83 |
STM4007 |
-39 |
-20 |
-26 |
-20 |
2.82 |
GcvB |
63 |
85 |
63 |
69 |
7.27 |
-13.85 |
-23.94 |
-1.34284 |
CACGACGACCGACCAUGACC&GGUUGUGAUGUUGUGUUGUUGUG |
((((((((((((((((((((&)))))))..)))).))))))))) |
CGGCGACACGGCCAGCAGAAUUGAAGAUCUCGUUACCACGACGACCGACCAUGACCAAUCCGGGAGAGUACAAGUAUGUCCGCUGAACACGUUUUGACGAUGCUGAACGAGCACGAAGUGAAGUUUGUCGAUCUGCGCUUCACCGAUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0189185 |
0.8629894 |
glnA |
1255533 |
type I glutamate--ammonia ligase |
STM2818 |
-20 |
-9 |
-20 |
-14 |
2.85 |
GcvB |
153 |
164 |
158 |
164 |
1.39 |
-18.09 |
-22.33 |
-1.75394 |
UGGACAGGCGGG&CCUGUCUGUCCA |
((((((((((((&)))))))))))) |
AAUUGUAGGUUUGGCAUGUAUGGCCGCCAUUACAGUUAUGCUUAUUAAAACGAUUUGGACAGGCGGGAGGUCAAUUUGAUCCCGGACGUAUCACAGGCUCUGGCCUGGCUGGAAAAACAUCCUCAGGCGUUAAAGGGGAUACAGCGCGGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.001114 |
0.4343002 |
gshA |
1254341 |
glutamate--cysteine ligase |
STM4083 |
-40 |
-22 |
-40 |
-34 |
2.95 |
GcvB |
138 |
155 |
149 |
155 |
2.38 |
-13.8 |
-19.13 |
-1.33799 |
AGGGUAAACUGUAGCGGAA&UUCCUGUACAUUUACCCU |
((((((((.((((..((((&))))..)))))))))))) |
UCACGAUUAAAACGAUAACUGUCGGGCUUGUCAAAAGGGUAAACUGUAGCGGAAGGCAAAAUAUAAGGAACUUACAUGACCAUACAGCAAUGGUUAUUCUCAUUUAAAGGGCGUAUCGGACGCCGUGAUUUCUGGAUUUGGAUCGGCCUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0194729 |
0.8669559 |
yiiR |
1255610 |
similar to E. coli orf hypothetical protein (AAC76903.1) Blastp hit to AAC76903.1 (146 aa) 90% identity in aa 1 - 141 |