STM1749 |
51 |
71 |
52 |
58 |
3.05 |
GcvB |
36 |
55 |
48 |
54 |
5.61 |
-15.39 |
-24.05 |
-1.49216 |
AAAAGCCCAGCGUGAAUAUGC&GCGUGUUCUGAUGGGCUUUU |
(((((((((....((((((((&))))))))...))))))))) |
UAUCGUCGAUCUGUCUAUACUCACGUAUCGCGCAGAUGAUUUACUAAAAAAGUUUAACAUUAUCAGGAGAGCAUUAUGGCUGUUACUAAUGUCGCUGAACUUAACGCACUCGUAGAGCGUGUAAAAAAAGCCCAGCGUGAAUAUGCCAGU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0074172 |
0.7711365 |
adhE |
1253268 |
bifunctional acetaldehyde-CoA/alcohol dehydrogenase |
STM1787 |
-64 |
2 |
-37 |
-31 |
11.4 |
GcvB |
34 |
90 |
54 |
60 |
15.42 |
-16.39 |
-43.21 |
-1.58911 |
GUAAACGCCACAAACAACAGUUAGCGCAAGCCGAACAACAGCCGGACAAUGAGGAUAAACAGGCAU&AUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGC |
((((((((.((((((((((.....((.((((((((....((((.....((.((....((((.((((&)))).)))))).)).)))))))))))).)).......)))))).)))).)))))))) |
GCUCAACCAACGUAAACGCCACAAACAACAGUUAGCGCAAGCCGAACAACAGCCGGACAAUGAGGAUAAACAGGCAUGAGUAACCAGUAUCAAACCCAGGGUUAUACCGUUAACGACGCCGGCCGUCGUCUGAUCGUGGACCCGAUUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0038311 |
0.6975035 |
|
1253306 |
[Ni/Fe] hydrogenase large subunit |
STM1789 |
-10 |
11 |
5 |
11 |
3.84 |
GcvB |
35 |
55 |
35 |
41 |
5.74 |
-17.32 |
-26.9 |
-1.67928 |
AGGAGCCCUCAUGAAUGCGCA&UGCGUGUUCUGAUGGGCUUUU |
(((((((((((.(((((((((&)))))))))))).)))))))) |
CGAUACGGUGAUCUCCACCAUGAUCAAUGGCUAUCGCAGCCAUAAAUUCCCCAAACCGCACGACAAGGAGCCCUCAUGAAUGCGCAACGCGUAGUGGUGAUGGGGUUAGGAAACCUGCUGUGGGCCGAUGAAGGAUUCGGUAUCCGGGUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0019866 |
0.598099 |
|
1253308 |
hydrogenase expression/formation protein |
STM1822 |
43 |
69 |
62 |
68 |
6.4 |
GcvB |
162 |
185 |
163 |
169 |
6.16 |
-14.36 |
-26.92 |
-1.39229 |
GUGGUGAUCUACAAUAAUACGCUGUGG&CCAUAGUGAUUAAUGUAGCACCGC |
((((((..(((((.((((.((((((((&)))))))))))).))))))))))) |
GUUACAGAGGUGACGGCGGCGCCACAUUGUGGCAGUCUUGAACCAUUCAAAUGAAAAGCAAAUGAGGAAUAAGUAAUGUCUAUCGUGCGUAUUGAUGCCGAAGAUCGUUGGUCAGACGUGGUGAUCUACAAUAAUACGCUGUGGUAUACC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0140165 |
0.7904009 |
yoaB |
1253341 |
similar to E. coli orf hypothetical protein (AAC74879.1) Blastp hit to AAC74879.1 (130 aa) 92% identity in aa 17 - 130 |
STM1856 |
-40 |
-18 |
-39 |
-33 |
1.92 |
GcvB |
64 |
87 |
80 |
86 |
7.14 |
-17.01 |
-26.07 |
-1.64922 |
AACACAACAUAUAACAUUAUAAC&GUUGUGAUGUUGUGUUGUUGUGUU |
(((((((((((((((((((((((&))))))))))))))).)))))))) |
AUAUCUGUAUGGCUGCUUUUAAGCAACAAUACUCUAACACAACAUAUAACAUUAUAACUUACAAUAGGUUAACAAAUGGAAUUACAGCUUAUGCUUAACCACUUUUUCGAGCGCGUCAGAAAGGAUGCAAAUUUCAACGCAUUUCUAAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0024848 |
0.659913 |
|
1253375 |
similar to E. coli orf hypothetical protein (AAC74245.1) Blastp hit to AAC74245.1 (134 aa) 40% identity in aa 1 - 127 |
STM1871 |
-72 |
-28 |
-46 |
-40 |
5.98 |
GcvB |
143 |
187 |
154 |
160 |
6.86 |
-14.41 |
-27.25 |
-1.39714 |
UGGCGAUACAGGACAGGAAAUUACAACGGACGGUGGAUCAGGUAC&GUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCA |
(((((.......(((...((((((.((((((((.((.....((((&)))).....)))))))))).....))))))..))).....))))) |
GGCUGGCGAUACAGGACAGGAAAUUACAACGGACGGUGGAUCAGGUACAACUUCAUAGCGCAAAACCACACGCCAGUGGCGCUUAUUGAAAAACUAAAAGGAACGGACUCAUUCACUGUGUCCGCAUGGAUUGAUCGCUAUGAGGUUUUA |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0136032 |
0.7904009 |
|
1253392 |
putative phage integrase protein |
STM1879 |
-34 |
15 |
6 |
12 |
6.01 |
GcvB |
49 |
86 |
52 |
58 |
10.91 |
-14.44 |
-31.36 |
-1.40005 |
AUAUAACAAAUAUUAACGCAAAAGAAAAAACGACAUGUUGCCAAAAGCC&GGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGU |
((((((((.......((((((........(((((..((.((((((((((&))))))))))..)).)))))....)))))))))))))) |
ACCGGGACUACCAUGCUACGCCGCUGUGUUUGCCGCGUGAUAUAUAACAAAUAUUAACGCAAAAGAAAAAACGACAUGUUGCCAAAAGCCAAUCGAAUUCCCUAUGCCAUGACCGUACAUGGCGAUACGCGCAUUGAUAAUUAUUACUGG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0133605 |
0.7904009 |
ptrB |
1253400 |
oligopeptidase B |
STM1953 |
-28 |
28 |
18 |
24 |
12.25 |
GcvB |
31 |
87 |
36 |
42 |
16.22 |
-18.8 |
-47.27 |
-1.82278 |
AACACACCACAACGUUACCGGAGGCUCAAUGCCACUACAUCACUUAACGCGCUUCC&GGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUU |
((((((((((((((((((((.((((.(((.(((....(((((...(((((((((((&)))).))))))).))))))))..))))))).)))...))))))))))..)).))))) |
AUCGGCGCCUUUUUUAUUUCCGUUAGAUCAACGUGCAUAAUAAAAAGAACACACCACAACGUUACCGGAGGCUCAAUGCCACUACAUCACUUAACGCGCUUCCCUCGCCUGGAGUUUAUCGGCGCGCCGACCCCGCUCGAAUACCUGCCG |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0006334 |
0.3847632 |
yedO |
1253474 |
D-cysteine desulfhydrase |
STM2096 |
18 |
30 |
24 |
30 |
4.12 |
GcvB |
152 |
164 |
152 |
158 |
1.44 |
-14.39 |
-19.95 |
-1.3952 |
UGGUAAGACAGGG&CCCUGUCUGUCCA |
(((..((((((((&))))))))..))) |
UACUCAAUGGGUAAACAAUGUUAAAAGUGGGGCGUAUCAGAGUUGGAUAGAACAGAACUAUGAAGGACGCCAGUAAUGAAUAUCUUACUUUUUGGUAAGACAGGGCAAGUAGGCUGGGAGUUGCAACGUUCUCUGGCACCGGUAGGGAAU |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0137672 |
0.7904009 |
rfbD |
1253617 |
dTDP-4-dehydrorhamnose reductase |
STM2179 |
-46 |
-27 |
-33 |
-27 |
2.39 |
GcvB |
69 |
90 |
69 |
75 |
6.4 |
-14.7 |
-23.49 |
-1.42526 |
GCAAACAUAAAAACAACAUC&GAUGUUGUGUUGUUGUGUUUGC |
((((((((((..((((((((&))))))))....)))))))))) |
UAUCGCUCACUCUACAAACUCGUAACAUAGCAAACAUAAAAACAACAUCUAUCUCCCUGCACUGAGGCAUUAGCUAUGACUCAACGACGUGAUCUACAAGCCCUUAUUGAUGCCGCGCCCGUCGGCAAAAUGCAGUGGCGCGUUAUCAUC |
ACUUCCUGAGCCGGAACGAAAAGUUUUAUCGGAAUGCGUGUUCUGAUGGGCUUUUGGCUUACGGUUGUGAUGUUGUGUUGUUGUGUUUGCAAUUGGUCUGCGAUUCAGACCACGGUAGCGAGACUACCCUUUUUCACUUCCUGUACAUUUACCCUGUCUGUCCAUAGUGAUUAAUGUAGCACCGCCAUAUUGCGGUGCUUU |
0.0114137 |
0.7904009 |
|
1253701 |
4-hydroxybenzoate transporter |