141 |
0.00519 |
0.1284 |
b3550 |
yiaC |
-7.29 |
0.227336 |
55 -- 76 |
1 -- 22 |
GNAT family putative N-acetyltransferase |
|
_____________54______________________77\n_____________|_______________________|\n5'-AAU...CAUCU_____C______CGAC_______CUAAG...GGC-3'\n______________ACGUC__GCCUC____GCCCUAU\n______________||:||__:||||____:|||||:\n______________UGUAG__UGGAG____UGGGAUG\n3'-AUU...UAUCU_____AA_____ACA________-5'\n_____________|______________________|\n_____________23_____________________1\n |
70 -- 76 |
1 -- 7 |
-20.6815 kcal/mol |
5.4259 kcal/mol |
7.99236 kcal/mol |
54 77@LB@ | |@LB@5'-AAU...CAUCU C CGAC CUAAG...GGC-3'@LB@ ACGUC GCCUC GCCCUAU@LB@ ||:|| :|||| :|||||:@LB@ UGUAG UGGAG UGGGAUG@LB@3'-AUU...UAUCU AA ACA -5'@LB@ | |@LB@ 23 1@LB@@LB@@LB@Energy -7.29 kcal/mol@LB@Hybridization Energy -20.6815 kcal/mol@LB@Unfolding Energy - mRNA 5.4259 kcal/mol@LB@Unfolding Energy - sRNA 7.99236 kcal/mol@LB@@LB@Position - mRNA 55 -- 76@LB@Position - sRNA 1 -- 22@LB@Position Seed - mRNA 70 -- 76@LB@Position Seed - sRNA 1 -- 7@LB@ |
152 |
0.006159 |
0.1406 |
b2467 |
nudK |
-9.74 |
0.053801 |
255 -- 261 |
1 -- 7 |
GDP-mannose pyrophosphatase |
|
_____________254_____262\n_____________|_______|\n5'-CAA...AUUUC_______ACAAC...AAG-3'\n______________ACCCUGC\n______________|||||:|\n______________UGGGAUG\n3'-AUU...AGACA_______-5'\n_____________|______|\n_____________8______1\n |
255 -- 261 |
1 -- 7 |
-11.9691 kcal/mol |
0.21022 kcal/mol |
2.03949 kcal/mol |
254 262@LB@ | |@LB@5'-CAA...AUUUC ACAAC...AAG-3'@LB@ ACCCUGC@LB@ |||||:|@LB@ UGGGAUG@LB@3'-AUU...AGACA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -9.74 kcal/mol@LB@Hybridization Energy -11.9691 kcal/mol@LB@Unfolding Energy - mRNA 0.21022 kcal/mol@LB@Unfolding Energy - sRNA 2.03949 kcal/mol@LB@@LB@Position - mRNA 255 -- 261@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 255 -- 261@LB@Position Seed - sRNA 1 -- 7@LB@ |
160 |
0.006479 |
0.1413 |
b0391 |
yaiE |
-12.00 |
0.010520 |
148 -- 162 |
1 -- 15 |
UPF0345 family protein |
|
_____________147_____________163\n_____________|_______________|\n5'-GAU...CCAGC_______GC______AGUGA...GCG-3'\n______________GCCUCUG__CCCUAU\n______________:||||||__|||||:\n______________UGGAGAC__GGGAUG\n3'-AUU...UAGAA_______AU______-5'\n_____________|______________|\n_____________16_____________1\n |
148 -- 154 |
9 -- 15 |
-21.6181 kcal/mol |
3.81195 kcal/mol |
5.82808 kcal/mol |
147 163@LB@ | |@LB@5'-GAU...CCAGC GC AGUGA...GCG-3'@LB@ GCCUCUG CCCUAU@LB@ :|||||| |||||:@LB@ UGGAGAC GGGAUG@LB@3'-AUU...UAGAA AU -5'@LB@ | |@LB@ 16 1@LB@@LB@@LB@Energy -12.00 kcal/mol@LB@Hybridization Energy -21.6181 kcal/mol@LB@Unfolding Energy - mRNA 3.81195 kcal/mol@LB@Unfolding Energy - sRNA 5.82808 kcal/mol@LB@@LB@Position - mRNA 148 -- 162@LB@Position - sRNA 1 -- 15@LB@Position Seed - mRNA 148 -- 154@LB@Position Seed - sRNA 9 -- 15@LB@ |
161 |
0.006501 |
0.1413 |
b2682 |
ygaZ |
-8.47 |
0.118892 |
208 -- 214 |
1 -- 7 |
putative L-valine exporter norvaline resistance protein |
|
_____________207_____215\n_____________|_______|\n5'-UGG...GGAAA_______UCCAC...CCU-3'\n______________GCCCUAC\n______________:||||||\n______________UGGGAUG\n3'-AUU...AGACA_______-5'\n_____________|______|\n_____________8______1\n |
208 -- 214 |
1 -- 7 |
-11.2451 kcal/mol |
0.761293 kcal/mol |
2.03949 kcal/mol |
207 215@LB@ | |@LB@5'-UGG...GGAAA UCCAC...CCU-3'@LB@ GCCCUAC@LB@ :||||||@LB@ UGGGAUG@LB@3'-AUU...AGACA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -8.47 kcal/mol@LB@Hybridization Energy -11.2451 kcal/mol@LB@Unfolding Energy - mRNA 0.761293 kcal/mol@LB@Unfolding Energy - sRNA 2.03949 kcal/mol@LB@@LB@Position - mRNA 208 -- 214@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 1 -- 7@LB@ |
166 |
0.006804 |
0.1439 |
b0475 |
hemH |
-7.56 |
0.197603 |
220 -- 228 |
1 -- 9 |
ferrochelatase |
|
_____________219_______229\n_____________|_________|\n5'-CGG...AACCG_________UGGCA...GCG-3'\n______________GUAUCCUGC\n______________|||:|||:|\n______________CAUGGGAUG\n3'-AUU...GGAGA_________-5'\n_____________|________|\n_____________10_______1\n |
222 -- 228 |
1 -- 7 |
-12.5413 kcal/mol |
2.87943 kcal/mol |
2.12872 kcal/mol |
219 229@LB@ | |@LB@5'-CGG...AACCG UGGCA...GCG-3'@LB@ GUAUCCUGC@LB@ |||:|||:|@LB@ CAUGGGAUG@LB@3'-AUU...GGAGA -5'@LB@ | |@LB@ 10 1@LB@@LB@@LB@Energy -7.56 kcal/mol@LB@Hybridization Energy -12.5413 kcal/mol@LB@Unfolding Energy - mRNA 2.87943 kcal/mol@LB@Unfolding Energy - sRNA 2.12872 kcal/mol@LB@@LB@Position - mRNA 220 -- 228@LB@Position - sRNA 1 -- 9@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 1 -- 7@LB@ |
169 |
0.006985 |
0.1454 |
b0384 |
psiF |
-5.27 |
0.543574 |
221 -- 228 |
1 -- 8 |
PsiF family protein |
|
_____________220______229\n_____________|________|\n5'-CCC...CUGGU________UUUUC...UGA-3'\n______________UACCUUGC\n______________||||:|:|\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
222 -- 228 |
1 -- 7 |
-9.62499 kcal/mol |
2.26355 kcal/mol |
2.11603 kcal/mol |
220 229@LB@ | |@LB@5'-CCC...CUGGU UUUUC...UGA-3'@LB@ UACCUUGC@LB@ ||||:|:|@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -5.27 kcal/mol@LB@Hybridization Energy -9.62499 kcal/mol@LB@Unfolding Energy - mRNA 2.26355 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 221 -- 228@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 222 -- 228@LB@Position Seed - sRNA 1 -- 7@LB@ |
170 |
0.007042 |
0.1457 |
b3110 |
yhaO |
-10.02 |
0.044877 |
174 -- 180 |
1 -- 7 |
putative transporter |
|
_____________173_____181\n_____________|_______|\n5'-AAU...AAUAA_______AAAAU...UCG-3'\n______________GCCCUAC\n______________:||||||\n______________UGGGAUG\n3'-AUU...AGACA_______-5'\n_____________|______|\n_____________8______1\n |
174 -- 180 |
1 -- 7 |
-12.6531 kcal/mol |
0.621925 kcal/mol |
2.03949 kcal/mol |
173 181@LB@ | |@LB@5'-AAU...AAUAA AAAAU...UCG-3'@LB@ GCCCUAC@LB@ :||||||@LB@ UGGGAUG@LB@3'-AUU...AGACA -5'@LB@ | |@LB@ 8 1@LB@@LB@@LB@Energy -10.02 kcal/mol@LB@Hybridization Energy -12.6531 kcal/mol@LB@Unfolding Energy - mRNA 0.621925 kcal/mol@LB@Unfolding Energy - sRNA 2.03949 kcal/mol@LB@@LB@Position - mRNA 174 -- 180@LB@Position - sRNA 1 -- 7@LB@Position Seed - mRNA 174 -- 180@LB@Position Seed - sRNA 1 -- 7@LB@ |
177 |
0.007672 |
0.1511 |
b2307 |
hisM |
-10.48 |
0.032509 |
175 -- 237 |
1 -- 57 |
histidine ABC transporter permease |
|
_____________174__________________________________________________________________238\n_____________|____________________________________________________________________|\n5'-CUC...GCUAC____UGGG___________________CCUGU___C___________AUGAAUA___GAA___G____UGUGG...CGG-3'\n______________UCCG____UGUGAAG___AGGG_CUGA_____GAU_GAA_AUCUUAC_______CUG___ACC_CUGC\n______________||||____:||||||___|:||_||||_____|||_|||_|||||||_______|||___|||_||:|\n______________AGGC____GCACUUC___UUCC_GACU_____CUA_CUU_UAGAAUG_______GAC___UGG_GAUG\n3'-AUU...GGUUU____UAAU_______AUU____A____UU______U___G_______GA________A__________-5'\n_____________|___________________________________________________________________|\n_____________58__________________________________________________________________1\n |
210 -- 216 |
14 -- 20 |
-38.5224 kcal/mol |
15.358 kcal/mol |
12.7026 kcal/mol |
174 238@LB@ | |@LB@5'-CUC...GCUAC UGGG CCUGU C AUGAAUA GAA G UGUGG...CGG-3'@LB@ UCCG UGUGAAG AGGG CUGA GAU GAA AUCUUAC CUG ACC CUGC@LB@ |||| :|||||| |:|| |||| ||| ||| ||||||| ||| ||| ||:|@LB@ AGGC GCACUUC UUCC GACU CUA CUU UAGAAUG GAC UGG GAUG@LB@3'-AUU...GGUUU UAAU AUU A UU U G GA A -5'@LB@ | |@LB@ 58 1@LB@@LB@@LB@Energy -10.48 kcal/mol@LB@Hybridization Energy -38.5224 kcal/mol@LB@Unfolding Energy - mRNA 15.358 kcal/mol@LB@Unfolding Energy - sRNA 12.7026 kcal/mol@LB@@LB@Position - mRNA 175 -- 237@LB@Position - sRNA 1 -- 57@LB@Position Seed - mRNA 210 -- 216@LB@Position Seed - sRNA 14 -- 20@LB@ |
189 |
0.008373 |
0.1558 |
b1559 |
quuQ |
-11.90 |
0.011421 |
197 -- 219 |
1 -- 24 |
Qin prophage; putative antitermination protein Q |
|
_____________196______________________220\n_____________|________________________|\n5'-UCU...AGAAC______GA______GAA_______CAAAA...AUG-3'\n______________GAGCAU___ACCUU___GCCUUAC\n______________||:|||___||||:___:||:|||\n______________CUUGUA___UGGAG___UGGGAUG\n3'-AUU...UCUAU______GAA_____ACA_______-5'\n_____________|_______________________|\n_____________25______________________1\n |
213 -- 219 |
1 -- 7 |
-21.9861 kcal/mol |
2.0909 kcal/mol |
8.02158 kcal/mol |
196 220@LB@ | |@LB@5'-UCU...AGAAC GA GAA CAAAA...AUG-3'@LB@ GAGCAU ACCUU GCCUUAC@LB@ ||:||| ||||: :||:|||@LB@ CUUGUA UGGAG UGGGAUG@LB@3'-AUU...UCUAU GAA ACA -5'@LB@ | |@LB@ 25 1@LB@@LB@@LB@Energy -11.90 kcal/mol@LB@Hybridization Energy -21.9861 kcal/mol@LB@Unfolding Energy - mRNA 2.0909 kcal/mol@LB@Unfolding Energy - sRNA 8.02158 kcal/mol@LB@@LB@Position - mRNA 197 -- 219@LB@Position - sRNA 1 -- 24@LB@Position Seed - mRNA 213 -- 219@LB@Position Seed - sRNA 1 -- 7@LB@ |
190 |
0.008456 |
0.1558 |
b0036 |
caiD |
-8.40 |
0.123663 |
110 -- 117 |
1 -- 8 |
carnitinyl-CoA dehydratase |
|
_____________109______118\n_____________|________|\n5'-UGG...GGAAC________CAGCU...AAA-3'\n______________UACCCUGC\n______________||||||:|\n______________AUGGGAUG\n3'-AUU...GAGAC________-5'\n_____________|_______|\n_____________9_______1\n |
111 -- 117 |
1 -- 7 |
-12.4513 kcal/mol |
1.95818 kcal/mol |
2.11603 kcal/mol |
109 118@LB@ | |@LB@5'-UGG...GGAAC CAGCU...AAA-3'@LB@ UACCCUGC@LB@ ||||||:|@LB@ AUGGGAUG@LB@3'-AUU...GAGAC -5'@LB@ | |@LB@ 9 1@LB@@LB@@LB@Energy -8.40 kcal/mol@LB@Hybridization Energy -12.4513 kcal/mol@LB@Unfolding Energy - mRNA 1.95818 kcal/mol@LB@Unfolding Energy - sRNA 2.11603 kcal/mol@LB@@LB@Position - mRNA 110 -- 117@LB@Position - sRNA 1 -- 8@LB@Position Seed - mRNA 111 -- 117@LB@Position Seed - sRNA 1 -- 7@LB@ |