141 |
0.03665 |
0.6968 |
lmo1798 |
N/A |
-14.74 |
0.108024 |
280 -- 295 |
194 -- 209 |
|
|
_____________279_______296\n_____________|_________|\n5'-GAU...CACUU_________AAUGG...GUU-3'\n______________AUAACGGGA\n______________|||||||||\n______________UAUUGCCCU\n3'-GUU...AUACG_________ACUCC...GGA-5'\n_____________|_________|\n_____________210_______193\n |
282 -- 288 |
201 -- 207 |
-12.5707 kcal/mol |
0.27177 kcal/mol |
0.374318 kcal/mol |
279 296@LB@ | |@LB@5'-GAU...CACUU AAUGG...GUU-3'@LB@ AUAACGGGA@LB@ |||||||||@LB@ UAUUGCCCU@LB@3'-GUU...AUACG ACUCC...GGA-5'@LB@ | |@LB@ 210 193@LB@@LB@@LB@Energy -14.74 kcal/mol@LB@Hybridization Energy -12.5707 kcal/mol@LB@Unfolding Energy - mRNA 0.27177 kcal/mol@LB@Unfolding Energy - sRNA 0.374318 kcal/mol@LB@@LB@Position - mRNA 280 -- 295@LB@Position - sRNA 194 -- 209@LB@Position Seed - mRNA 282 -- 288@LB@Position Seed - sRNA 201 -- 207@LB@ |
142 |
0.03693 |
0.6968 |
lmo2586 |
N/A |
-16.96 |
0.041696 |
196 -- 266 |
151 -- 227 |
formate dehydrogenase subunit alpha |
|
_____________195______267\n_____________|________|\n5'-UUU...GUGGC________UGGUG...AUC-3'\n______________GCGGGAUG\n______________:|||||||\n______________UGCCCUAC\n3'-GUU...CGUAU________UCCGU...GGA-5'\n_____________|________|\n_____________228______150\n |
240 -- 246 |
199 -- 205 |
-13.0644 kcal/mol |
3.68871 kcal/mol |
0.331032 kcal/mol |
195 267@LB@ | |@LB@5'-UUU...GUGGC UGGUG...AUC-3'@LB@ GCGGGAUG@LB@ :|||||||@LB@ UGCCCUAC@LB@3'-GUU...CGUAU UCCGU...GGA-5'@LB@ | |@LB@ 228 150@LB@@LB@@LB@Energy -16.96 kcal/mol@LB@Hybridization Energy -13.0644 kcal/mol@LB@Unfolding Energy - mRNA 3.68871 kcal/mol@LB@Unfolding Energy - sRNA 0.331032 kcal/mol@LB@@LB@Position - mRNA 196 -- 266@LB@Position - sRNA 151 -- 227@LB@Position Seed - mRNA 240 -- 246@LB@Position Seed - sRNA 199 -- 205@LB@ |
143 |
0.03726 |
0.6968 |
lmo2701 |
N/A |
-17.97 |
0.026314 |
78 -- 126 |
156 -- 198 |
|
|
_____________77_________________________________________________127\n_____________|__________________________________________________|\n5'-GAA...CCUUC_______AAAGUA___A____AGC________UUCCA_____________UUAGA...UCA-3'\n______________AGGCAUA______ACG_GAAU___GCAUGGCC______GUGGGUGGAGAC\n______________|||||||______||:_|||:___:||:||||______:||::||:|:||\n______________UCCGUAU______UGU_CUUG___UGUGCCGG______UACUUACUUUUG\n3'-GUU...CCUAC_______C________A____A__________UUACUC____________UUUAU...GGA-5'\n_____________|__________________________________________________|\n_____________199________________________________________________155\n |
120 -- 126 |
156 -- 162 |
-37.6493 kcal/mol |
12.7788 kcal/mol |
13.9626 kcal/mol |
77 127@LB@ | |@LB@5'-GAA...CCUUC AAAGUA A AGC UUCCA UUAGA...UCA-3'@LB@ AGGCAUA ACG GAAU GCAUGGCC GUGGGUGGAGAC@LB@ ||||||| ||: |||: :||:|||| :||::||:|:||@LB@ UCCGUAU UGU CUUG UGUGCCGG UACUUACUUUUG@LB@3'-GUU...CCUAC C A A UUACUC UUUAU...GGA-5'@LB@ | |@LB@ 199 155@LB@@LB@@LB@Energy -17.97 kcal/mol@LB@Hybridization Energy -37.6493 kcal/mol@LB@Unfolding Energy - mRNA 12.7788 kcal/mol@LB@Unfolding Energy - sRNA 13.9626 kcal/mol@LB@@LB@Position - mRNA 78 -- 126@LB@Position - sRNA 156 -- 198@LB@Position Seed - mRNA 120 -- 126@LB@Position Seed - sRNA 156 -- 162@LB@ |
144 |
0.03753 |
0.6968 |
lmo2422 |
N/A |
-16.62 |
0.048504 |
29 -- 68 |
172 -- 209 |
two-component response regulator |
|
_____________28___________________________________69\n_____________|____________________________________|\n5'-AUG...AUUCG____________AAAU_______G___U________UUUAU...AUG-3'\n______________CUAUGU__GACG____UGAGGCA_AGA_UAUGAAUU\n______________|||||:__:|||____|||||||_|||_:|||||:|\n______________GAUACG__UUGC____ACUCCGU_UCU_GUACUUGA\n3'-GUU...CCGCG______UA____CCU________A____________UGUGC...GGA-5'\n_____________|____________________________________|\n_____________210__________________________________171\n |
39 -- 45 |
194 -- 200 |
-29.3631 kcal/mol |
6.47642 kcal/mol |
13.3074 kcal/mol |
28 69@LB@ | |@LB@5'-AUG...AUUCG AAAU G U UUUAU...AUG-3'@LB@ CUAUGU GACG UGAGGCA AGA UAUGAAUU@LB@ |||||: :||| ||||||| ||| :|||||:|@LB@ GAUACG UUGC ACUCCGU UCU GUACUUGA@LB@3'-GUU...CCGCG UA CCU A UGUGC...GGA-5'@LB@ | |@LB@ 210 171@LB@@LB@@LB@Energy -16.62 kcal/mol@LB@Hybridization Energy -29.3631 kcal/mol@LB@Unfolding Energy - mRNA 6.47642 kcal/mol@LB@Unfolding Energy - sRNA 13.3074 kcal/mol@LB@@LB@Position - mRNA 29 -- 68@LB@Position - sRNA 172 -- 209@LB@Position Seed - mRNA 39 -- 45@LB@Position Seed - sRNA 194 -- 200@LB@ |
145 |
0.03765 |
0.6968 |
lmo0134 |
N/A |
-12.36 |
0.267504 |
193 -- 220 |
147 -- 170 |
|
|
_____________192__________________________221\n_____________|____________________________|\n5'-GGG...AGGAG_____UA_______UAUAA_________AAAUA...UUA-3'\n______________GAGAU__AAUGGAA_____AAAUGGUGA\n______________|||||__||||:||_____||||::|||\n______________CUCUA__UUACUUU_____UUUAUUACU\n3'-GUU...GGUUA_____C________UG____________AAAAC...GGA-5'\n_____________|____________________________|\n_____________171__________________________146\n |
200 -- 206 |
158 -- 164 |
-15.5721 kcal/mol |
1.73331 kcal/mol |
5.93585 kcal/mol |
192 221@LB@ | |@LB@5'-GGG...AGGAG UA UAUAA AAAUA...UUA-3'@LB@ GAGAU AAUGGAA AAAUGGUGA@LB@ ||||| ||||:|| ||||::|||@LB@ CUCUA UUACUUU UUUAUUACU@LB@3'-GUU...GGUUA C UG AAAAC...GGA-5'@LB@ | |@LB@ 171 146@LB@@LB@@LB@Energy -12.36 kcal/mol@LB@Hybridization Energy -15.5721 kcal/mol@LB@Unfolding Energy - mRNA 1.73331 kcal/mol@LB@Unfolding Energy - sRNA 5.93585 kcal/mol@LB@@LB@Position - mRNA 193 -- 220@LB@Position - sRNA 147 -- 170@LB@Position Seed - mRNA 200 -- 206@LB@Position Seed - sRNA 158 -- 164@LB@ |
146 |
0.03799 |
0.6968 |
lmo1526 |
N/A |
-15.66 |
0.073786 |
160 -- 215 |
153 -- 207 |
|
|
_____________159____________________216\n_____________|______________________|\n5'-AUG...AGGAG____AAACA____A________AGUAC...UAA-3'\n______________GAGA_____UGAA_GAAAAUAA\n______________||||_____||||_|||||:||\n______________CUCU_____ACUU_CUUUUGUU\n3'-GUU...GGUUA_____________A________UAUUA...GGA-5'\n_____________|______________________|\n_____________208____________________152\n |
208 -- 214 |
154 -- 160 |
-11.4679 kcal/mol |
1.00795 kcal/mol |
0.933796 kcal/mol |
159 216@LB@ | |@LB@5'-AUG...AGGAG AAACA A AGUAC...UAA-3'@LB@ GAGA UGAA GAAAAUAA@LB@ |||| |||| |||||:||@LB@ CUCU ACUU CUUUUGUU@LB@3'-GUU...GGUUA A UAUUA...GGA-5'@LB@ | |@LB@ 208 152@LB@@LB@@LB@Energy -15.66 kcal/mol@LB@Hybridization Energy -11.4679 kcal/mol@LB@Unfolding Energy - mRNA 1.00795 kcal/mol@LB@Unfolding Energy - sRNA 0.933796 kcal/mol@LB@@LB@Position - mRNA 160 -- 215@LB@Position - sRNA 153 -- 207@LB@Position Seed - mRNA 208 -- 214@LB@Position Seed - sRNA 154 -- 160@LB@ |
147 |
0.03815 |
0.6968 |
lmo0655 |
N/A |
-15.78 |
0.070044 |
227 -- 290 |
154 -- 212 |
phosphoprotein phosphatase |
|
_____________226_____________291\n_____________|_______________|\n______5'-AACAA______UU_______CCACA...UUG-3'\n______________GAGA_G__UGAAGAC\n______________||||_|__||||:||\n______________CUCU_C__ACUUUUG\n3'-GUU...GGUUA____A_UU_______UUUAU...GGA-5'\n_____________|_______________|\n_____________213_____________153\n |
13 -- 19 |
156 -- 162 |
-12.8457 kcal/mol |
3.32795 kcal/mol |
0.916023 kcal/mol |
226 291@LB@ | |@LB@ 5'-AACAA UU CCACA...UUG-3'@LB@ GAGA G UGAAGAC@LB@ |||| | ||||:||@LB@ CUCU C ACUUUUG@LB@3'-GUU...GGUUA A UU UUUAU...GGA-5'@LB@ | |@LB@ 213 153@LB@@LB@@LB@Energy -15.78 kcal/mol@LB@Hybridization Energy -12.8457 kcal/mol@LB@Unfolding Energy - mRNA 3.32795 kcal/mol@LB@Unfolding Energy - sRNA 0.916023 kcal/mol@LB@@LB@Position - mRNA 227 -- 290@LB@Position - sRNA 154 -- 212@LB@Position Seed - mRNA 13 -- 19@LB@Position Seed - sRNA 156 -- 162@LB@ |
148 |
0.03863 |
0.6968 |
lmo1766 |
purN |
-15.06 |
0.094934 |
1 -- 35 |
156 -- 188 |
phosphoribosylglycinamide formyltransferase |
|
______________1__________________________________36\n______________|__________________________________|\n___________5'-_____GAA___________UAAAC_A_________GUAUG...AUA-3'\n______________GUGAA___AUACGGCCAAU_____G_AAUGGAAAU\n______________:||||___|:|||||||||_____|_||||:|||:\n______________UACUU___UGUGCCGGUUA_____C_UUACUUUUG\n3'-GUU...AUCUG_____GA____________CUCUA___________UUUAU...GGA-5'\n_____________|___________________________________|\n_____________189_________________________________155\n |
29 -- 35 |
156 -- 162 |
-25.7257 kcal/mol |
7.32217 kcal/mol |
9.72027 kcal/mol |
1 36@LB@ | |@LB@ 5'- GAA UAAAC A GUAUG...AUA-3'@LB@ GUGAA AUACGGCCAAU G AAUGGAAAU@LB@ :|||| |:||||||||| | ||||:|||:@LB@ UACUU UGUGCCGGUUA C UUACUUUUG@LB@3'-GUU...AUCUG GA CUCUA UUUAU...GGA-5'@LB@ | |@LB@ 189 155@LB@@LB@@LB@Energy -15.06 kcal/mol@LB@Hybridization Energy -25.7257 kcal/mol@LB@Unfolding Energy - mRNA 7.32217 kcal/mol@LB@Unfolding Energy - sRNA 9.72027 kcal/mol@LB@@LB@Position - mRNA 1 -- 35@LB@Position - sRNA 156 -- 188@LB@Position Seed - mRNA 29 -- 35@LB@Position Seed - sRNA 156 -- 162@LB@ |
149 |
0.0387 |
0.6968 |
lmo1809 |
plsX |
-16.53 |
0.050633 |
188 -- 233 |
156 -- 203 |
glycerol-3-phosphate acyltransferase PlsX |
|
_____________187________________234\n_____________|__________________|\n5'-ACA...CUGUA____C_____________CACGC...UUC-3'\n______________GAUG_GAUGGGUGGAGAU\n______________:|||_||||::||:|:|:\n______________UUAC_CUACUUACUUUUG\n3'-GUU...GCCGG____U_____________UUUAU...GGA-5'\n_____________|__________________|\n_____________204________________155\n |
227 -- 233 |
156 -- 162 |
-17.4325 kcal/mol |
7.3364 kcal/mol |
0.941471 kcal/mol |
187 234@LB@ | |@LB@5'-ACA...CUGUA C CACGC...UUC-3'@LB@ GAUG GAUGGGUGGAGAU@LB@ :||| ||||::||:|:|:@LB@ UUAC CUACUUACUUUUG@LB@3'-GUU...GCCGG U UUUAU...GGA-5'@LB@ | |@LB@ 204 155@LB@@LB@@LB@Energy -16.53 kcal/mol@LB@Hybridization Energy -17.4325 kcal/mol@LB@Unfolding Energy - mRNA 7.3364 kcal/mol@LB@Unfolding Energy - sRNA 0.941471 kcal/mol@LB@@LB@Position - mRNA 188 -- 233@LB@Position - sRNA 156 -- 203@LB@Position Seed - mRNA 227 -- 233@LB@Position Seed - sRNA 156 -- 162@LB@ |
150 |
0.03884 |
0.6968 |
lmo1709 |
N/A |
-16.64 |
0.048121 |
221 -- 241 |
163 -- 181 |
methionine aminopeptidase |
|
_____________220__________242\n_____________|____________|\n5'-UCA...GAAAU____________AGCAG...CUG-3'\n______________CGAUGAGAUGAA\n______________|:||||||||||\n______________GUUACUCUACUU\n3'-GUU...UGCCG____________ACUUU...GGA-5'\n_____________|____________|\n_____________182__________162\n |
235 -- 241 |
163 -- 169 |
-15.3561 kcal/mol |
3.44721 kcal/mol |
0.694462 kcal/mol |
220 242@LB@ | |@LB@5'-UCA...GAAAU AGCAG...CUG-3'@LB@ CGAUGAGAUGAA@LB@ |:||||||||||@LB@ GUUACUCUACUU@LB@3'-GUU...UGCCG ACUUU...GGA-5'@LB@ | |@LB@ 182 162@LB@@LB@@LB@Energy -16.64 kcal/mol@LB@Hybridization Energy -15.3561 kcal/mol@LB@Unfolding Energy - mRNA 3.44721 kcal/mol@LB@Unfolding Energy - sRNA 0.694462 kcal/mol@LB@@LB@Position - mRNA 221 -- 241@LB@Position - sRNA 163 -- 181@LB@Position Seed - mRNA 235 -- 241@LB@Position Seed - sRNA 163 -- 169@LB@ |