Freiburg RNA Tools
metaMIR - Results
BIF
IFF
metaMIR 7437261

Input and runtime details for job 7437261 (precomputed example)

Input

? List of genes analyzed
APC AXIN1 AXIN2 BAMBI CTNNB1 DVL1 DVL2 DVL3 FZD3 FZD6 GSK3B LEF1 LRP5 LRP6 TCF7 TCF7L1 TCF7L2 WNT1
? Minimum number of genes per cluster5
? Maximum number of genes per cluster20
? Minimum score to return1.1

Job ID 7437261 (server version 4.3.0)

?Job Submitted & Queued@ Mon Aug 08 10:13:07 CEST 2016
?metaMIR Started@ Mon Aug 08 10:13:09 CEST 2016
?metaMIR Finished & Post-Processing@ Mon Aug 08 10:13:45 CEST 2016
?Job Completed@ Mon Aug 08 10:13:45 CEST 2016
 DIRECT ACCESS: http://rna.informatik.uni-freiburg.de/RetrieveResults.jsp?jobID=7437261&toolName=metaMIR ( 30 days expiry )

Description of the job

example1

An example of a standard analysis in metaMIR, where the prediction is conducted such that all genes are potential targets for down-regulation by the returned miRNAs.

? Output download complete results [zip]

Result table

Show rows: 1-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100 101-110 111-120 121-130 131-140 141-150 151-160 161-170 171-180 181-190 191-200 201-210 211-220 221-230 231-240 241-250 251-260 261-266 all
Sort by selecting a column name.
miRNA Final Score Positive Combo Positive Score Positive Group Positive List
hsa-miR-3912-3p 3.93 APC,AXIN2,CTNNB1,LEF1,LRP6,TCF7L2 3.932 6 L1
hsa-miR-4671-5p 3.27 AXIN2,DVL1,DVL2,DVL3,TCF7,WNT1 3.268 6 L1
hsa-miR-18b-5p 2.79 AXIN2,CTNNB1,DVL2,DVL3,FZD3,GSK3B,LRP6,TCF7,WNT1 2.793 9 L1
hsa-miR-7154-3p 2.75 AXIN1,AXIN2,DVL2,DVL3,GSK3B,LRP6,TCF7L1,WNT1 2.754 8 L1
hsa-miR-18a-5p 2.74 AXIN2,CTNNB1,DVL2,DVL3,FZD3,GSK3B,TCF7,TCF7L2,WNT1 2.736 9 L1
hsa-miR-4781-5p 2.62 AXIN1,DVL1,GSK3B,LRP5,TCF7,TCF7L2 2.625 6 L1
hsa-miR-675-5p 2.57 APC,AXIN1,DVL3,FZD3,GSK3B,LRP5 2.574 6 L1
hsa-miR-135b-5p 2.36 APC,AXIN2,FZD3,FZD6,GSK3B,LRP5,LRP6,TCF7,TCF7L2 2.364 9 L1
hsa-miR-29b-3p 2.36 AXIN2,CTNNB1,DVL1,DVL3,FZD3,FZD6,GSK3B,LEF1,LRP6 2.36 9 L1
hsa-miR-934 2.36 AXIN1,DVL2,DVL3,FZD3,FZD6,GSK3B 2.357 6 L1
Rows: 1-10 11-20 21-30 31-40 41-50 51-60 61-70 71-80 81-90 91-100 101-110 111-120 121-130 131-140 141-150 151-160 161-170 171-180 181-190 191-200 201-210 211-220 221-230 231-240 241-250 251-260 261-266 all

Result table - repPos

The table is empty.

Result table - clusterPos

The table is empty.

Job resubmission

Use the following button if you want to resubmit the job with altered input or parameterization:
Feeds the job parameters to the input page to resubmit the job.

de.NBI usability assessment

Please support us by filling this short quality survey for evaluating this de.NBI service.

When using metaMIR please cite :

Results are computed with metaMIR version 1.0.0 using R 3.2.1