b4308 |
25 |
59 |
46 |
52 |
9.14 |
RyhB |
53 |
90 |
60 |
66 |
14.49 |
-11.59 |
-35.22 |
-1.21866 |
AAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGC&GCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
(((((..(((((((((((.(((((((((.((..((&))..)).)))))))...))..))))))))))).))))) |
GAACUCCCAGCAAGACCCUGUAAAUAAUUCUGUGUAACUGCCCACGAUUAAAGGUGGCCGCUCAGGCGGUCACCGUAUUCGAUAAUAAAUGGGUCUGGAAAAAGUGCAGCAUCUGGCAGCGUAAUGCAGGUAGCCCAGUUCAACUCUCAC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0205432 |
0.9496255 |
yjhR |
944740 |
pseudogene helicase family putative frameshift suppressor |
b4348 |
-73 |
-53 |
-59 |
-53 |
7.54 |
RyhB |
40 |
66 |
40 |
46 |
3.3 |
-15.87 |
-26.71 |
-1.66869 |
GUGAACUGGGGGCGAGCGAUG&CAUUGCUCACAUUGCUUCCAGUAUUAC |
(((((((((((((((((((((&)))))))).....))))))))).)))) |
GCGUGAACUGGGGGCGAGCGAUGAGGCCGAUUUGCAGCGUCAGUUGCUGGAAGAAGCGUUUGGUGGGGUGAAGGAAUGAGUGCGGGGAAAUUGCCGGAGGGGUGGGUUAUCGCCCCAGUAUCUACGGUCACAACUCUAAUCCGAGGAGUA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0018209 |
0.7909534 |
hsdS |
948867 |
specificity determinant for hsdM and hsdR |
b4355 |
-74 |
-65 |
-73 |
-67 |
2.24 |
RyhB |
16 |
25 |
18 |
24 |
4.34 |
-13.09 |
-19.67 |
-1.37638 |
UCUCCGCGGG&CUCGCGGAGA |
((((((((((&)))))))))) |
AUCUCCGCGGGAUAUUCAUAAAGUUUUUCCUUUCCAGGCCGAAAAUCUUGCAUCGGUCCACAGGAAAGAGAAACCAUGUUAAAACGUAUCAAAAUUGUGACCAGCUUACUGCUGGUUUUGGCCGUUUUUGGCCUUUUACAACUGACAUCA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091019 |
0.9291058 |
tsr |
948884 |
methyl-accepting chemotaxis protein I serine sensor receptor |
b4469 |
-11 |
12 |
-10 |
-4 |
5.61 |
RyhB |
38 |
60 |
53 |
59 |
3.3 |
-13.54 |
-22.45 |
-1.4237 |
CUGGAAGCAAAAUGAGCUCUAUC&GACAUUGCUCACAUUGCUUCCAG |
((((((((((...((((....((&))....))))...)))))))))) |
ACCUUUCGAUUUCUCUUUCGUUCCGGCUUAUAAUCCCCGGCCUUUGAUUAUUUUUUUAUCAUUUCUGGAAGCAAAAUGAGCUCUAUCUCCCUGAUCCAACCGGAUCGCGACCUGUUCUCCUGGCCGCAGUACUGGGCCGCCUGUUUUGGA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0070778 |
0.9291058 |
ygiQ |
948963 |
Radical SAM superfamily protein |
b4470 |
-72 |
-27 |
-34 |
-28 |
5.49 |
RyhB |
4 |
61 |
5 |
11 |
14.12 |
-12.39 |
-32 |
-1.30278 |
ACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAU&AUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGU |
(((((..(((.((((((((((((((((.....((..((((((((((&)))))))))).))...)))))).......))))).)))..))..)))......))))) |
GUCACUGGUUUGUUGCUGUGUGUUUCUCCGUUCCUGGCAUUUUCUUGAUUUACCUGAAAUUUUAAGGUUUUUAAUAUGUUUGAUUCGACUUUAAAUCCGUUAUGGCAGCGUUACAUCCUCGCCGUUCAGGAGGAAGUAAAACCGGCGCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0133704 |
0.9496255 |
yhaM |
2847723 |
putative L-serine dehydratase alpha chain |
b4516 |
-39 |
-2 |
-9 |
-3 |
8.43 |
RyhB |
21 |
62 |
22 |
28 |
7.99 |
-11.31 |
-27.73 |
-1.18922 |
UACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCC&GGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUA |
(((((....((((((((...(((((((..(((((((((&))))))))).)))))))..))).....))))).....))))) |
UUCAUCGCAUGGACAAUACGGGUGAUGCUGCCAACUUACUGAUUUAGUGUAUGAUGGUGUUUUUGAGGUUCUCCAGUGGCUUCUGUUUCUAUCAGCUGUCCCUCCUGUUCAGCUACUGACGGGGUGGUGCGUAACGGCAAAAGCACUGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0238147 |
0.9496255 |
insA |
1450250 |
IS1 repressor TnpA |
b4532 |
-9 |
18 |
-5 |
2 |
7.78 |
RyhB |
38 |
58 |
48 |
54 |
3.21 |
-13.67 |
-24.66 |
-1.43737 |
GGAGGCGAUGUGAAACAAAGCGAGUUC&GACAUUGCUCACAUUGCUUCC |
(((((((((((((......((((..((&))..))))))))))))))))) |
AUUUUCGAGCAAAUUACACACGGAGGUAAACACUAAUGUUUACUUUGUUGAUAUACUCAGCGGCAGGGAGGCGAUGUGAAACAAAGCGAGUUCAGACGUUGGCUCGAAUCUCAGGGCGUCGAUGUAGCGAAUGGCAGCAACCAUUUGAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0065776 |
0.9291058 |
hicA |
945989 |
mRNA interferase toxin of the HicAB toxin-antitoxin system |
b4547 |
-4 |
42 |
8 |
14 |
11.38 |
RyhB |
38 |
88 |
70 |
76 |
14.91 |
-12.44 |
-38.73 |
-1.30804 |
AAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUC&GACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUU |
((((.....(((((((((((((((((((.......((((((.((((&)))))))).))........))))))))...)))))))))))......)))) |
CUACUUGCCCGUAUGUAUCAACGUAUCAUGGAACAGCUCGUCGCCUGAUGAGUGGUUCUGCAAGAGGAAAUAAGCAUGGACUGGCUGGCUAAAUAUUGGUGGAUUCUGGUGAUUGUCUUUUUGGUAGGCGUCCUGCUGAACGUGAUUAAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0130116 |
0.9496255 |
ypfN |
1450286 |
putative membrane protein UPF0370 family |
b4551 |
57 |
73 |
67 |
73 |
3.25 |
RyhB |
39 |
58 |
39 |
45 |
3.21 |
-10.85 |
-17.31 |
-1.14085 |
GGAUUCAAUGGCGAUGU&ACAUUGCUCACAUUGCUUCC |
(((..((((((((((((&)))))))...)))))..))) |
GAGAUUUUCCAGCGUGAAAUGCAACAAGAACGACGCCAGCUGGACGGCUGGGAUGAAUUUGAGUAGAGGGUAAAGAUGGCAAUCCGAAAACGUUUUAUUGCGGGCGCAAAAUGCCCGGCCUGUCAGGCGCAGGAUUCAAUGGCGAUGUGG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0302697 |
0.9496255 |
yheV |
1450290 |
DUF2387 family putative metal-binding protein |
b4633 |
-42 |
-17 |
-32 |
-26 |
9.35 |
RyhB |
37 |
66 |
49 |
55 |
3.3 |
-12.21 |
-24.86 |
-1.28385 |
GUAUUUGGGGAGCAAUGGCGAUGACG&CGACAUUGCUCACAUUGCUUCCAGUAUUAC |
(((....((((((((((((((((.((&)).))))))...)))))))))).....))) |
AAAAUGGACGAGGCACUGGCUGAAAUUGGUUUUGUAUUUGGGGAGCAAUGGCGAUGACGCAUCCUCACGAUAAUAUCCGGGUACCUCACAACACGGCAAGCCUGCAUUGCGGCGCUUCAGUCUCCGCUGCAUACUGUCCAGGUGAGCGCG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0147406 |
0.9496255 |
xisD |
5625559 |
pseudogene exisionase in defective prophage DLP12Phage or Prophage Related |