b2550 |
-75 |
-66 |
-72 |
-66 |
1.49 |
RyhB |
39 |
49 |
39 |
45 |
1.15 |
-11.07 |
-13.71 |
-1.16398 |
GUGGCAGUGU&ACAUUGCUCAC |
((((((((((&))))))).))) |
GUGGCAGUGUAUUGAACAAUCUGGCAAUGUUUUCGCGGAAUAAUCACGCAAUUAACUAAACAAGGUUUAGUGAAGAUGAGAGCCUGCAUUAAUAAUCAACAGAUUCGCCACCAUAACAAAUGCGUGAUUCUGGAACUGCUGUACCGGCAA |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0270016 |
0.9496255 |
yphH |
947023 |
putative DNA-binding transcriptional regulator |
b2563 |
-20 |
16 |
-16 |
-10 |
9.76 |
RyhB |
25 |
63 |
53 |
59 |
7.98 |
-13.42 |
-31.16 |
-1.41108 |
AUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUU&AACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAU |
(((((((((((..(((((.((((......(((((((&)))))))........)))))).)))...))))))))))) |
UGGUCGUGCAGUGAUGACCGGACUGAAAGAUGCGGUGGCAGAAAUGAAGCGUCUGAUGCUGGAAGCGCGUGGCUAAUGGCAAUAUUAGGUUUAGGCACGGAUAUUGUGGAGAUCGCUCGCAUCGAAGCGGUGAUCGCCCGAUCCGGUGAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0075713 |
0.9291058 |
acpS |
947037 |
holo-[acyl-carrier-protein] synthase 1 |
b2714 |
60 |
72 |
66 |
72 |
7.05 |
RyhB |
26 |
38 |
26 |
32 |
5.77 |
-10.91 |
-23.73 |
-1.14716 |
CGUGCUUUCAGGU&ACCUGAAAGCACG |
(((((((((((((&))))))))))))) |
UCCCGCCGAUUGUGCAAGGACAAUCGGCAAACGGUGCAGUACACUGCGUUGAUUGCGUGUAAAGGGAUGAAAAUGAUGACGACGAUGCUGGAAGUGGCGAAGCGCGCCGGGGUUUCAAAAGCGACCGUUUCCCGCGUGCUUUCAGGUAAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0293435 |
0.9496255 |
ascG |
947305 |
asc operon transcriptional repressor prpBC operon repressor |
b2727 |
-7 |
4 |
-6 |
1 |
4.77 |
RyhB |
39 |
49 |
42 |
48 |
1.15 |
-12.05 |
-17.97 |
-1.26703 |
GUGAGCGAUGU&ACAUUGCUCAC |
(((((((((((&))))))))))) |
CAUGGUGACAUGCUGCAGAUUGUGGCAGACGACGGUUUACAGAUUCGGCGGAUAGAAAUAGACCAGGAGUGAGCGAUGUGUACAACAUGCGGUUGCGGUGAAGGCAACCUGUAUAUCGAGGGUGAUGAACAUAACCCUCAUUCCGCGUUU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0160688 |
0.9496255 |
hypB |
947194 |
GTP hydrolase involved in nickel liganding into hydrogenases |
b2736 |
56 |
71 |
56 |
62 |
3.84 |
RyhB |
38 |
59 |
53 |
59 |
3.27 |
-11.65 |
-18.76 |
-1.22497 |
UGGGAGCAGCACUGUC&GACAUUGCUCACAUUGCUUCCA |
(((((((((((.((((&)))).))))......))))))) |
CACCAUACCGUUAUCUUCCAGCGCUUAUAUUCACAAUAUCAAACAAAAUAUCACUUAAAUUAACAAGGAGAGCAGAUGAAAACGGGAUCUGAGUUUCAUGUCGGUAUCGUUGGCUUAGGGUCAAUGGGAAUGGGAGCAGCACUGUCAUAU |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0198994 |
0.9496255 |
ygbJ |
947200 |
putative dehydrogenase |
b2789 |
55 |
75 |
55 |
61 |
3.43 |
RyhB |
37 |
62 |
56 |
62 |
3.3 |
-13.26 |
-19.99 |
-1.39426 |
UACUGGAUAGUGGUGAUGUUG&CGACAUUGCUCACAUUGCUUCCAGUA |
(((((((..((((((((((((&))))))))).)))......))))))) |
ACGUCACCUCUGAUUUCCUGGCGAUGUCGCAGUCCAGAGUGAGCGUGGCUAACGCGAAUUUUCAGGAGUGCAACAAUGAGUUCUUUAAGUCAGGCUGCGAGCAGUGUGGAAAAACGCACAAAUGCUCGUUACUGGAUAGUGGUGAUGUUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0082802 |
0.9291058 |
gudP |
947265 |
putative D-glucarate transporter |
b2799 |
-75 |
-65 |
-71 |
-65 |
1.36 |
RyhB |
56 |
66 |
56 |
62 |
2 |
-13.09 |
-16.45 |
-1.37638 |
GUAGUGCUGGA&UCCAGUAUUAC |
(((((((((((&))))))))))) |
GUAGUGCUGGAGAAAUUCAAAACCUAUGGGUUACGAAUUGAAGAGUAAUUUCGUAAAGCAACAAGGAGAAGGAUGAUGGCUAACAGAAUGAUUCUGAACGAAACGGCAUGGUUUGGUCGGGGUGCUGUUGGGGCUUUAACCGAUGAGGUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0091019 |
0.9291058 |
fucO |
947273 |
L-12-propanediol oxidoreductase |
b2819 |
20 |
33 |
23 |
29 |
4.07 |
RyhB |
47 |
62 |
53 |
59 |
3.09 |
-12.43 |
-19.59 |
-1.30698 |
UACUGGAAGCUGUG&CACAUUGCUUCCAGUA |
((((((((((((((&))))..)))))))))) |
CACAACCCGACCCAACGCCGGGUUGAUUGCCCUGAUGGAUGAGAUGUUUGCCGGUAUGACCCUGGAGGAGGCGUAAUGAAAUUGCAAAAGCAAUUACUGGAAGCUGUGGAGCACAAACAGCUACGCCCGCUGGAUGUGCAAUUUGCCCUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0130826 |
0.9496255 |
recD |
947287 |
exonuclease V (RecBCD complex) alpha chain |
b2820 |
2 |
13 |
3 |
9 |
3.01 |
RyhB |
37 |
48 |
41 |
47 |
1.15 |
-12.36 |
-16.52 |
-1.29962 |
UGAGUGAUGUCG&CGACAUUGCUCA |
((((((((((((&)))))))))))) |
UACACCCUGAAGGCUGGAAAGUGUGGGAGAACGUCAGCGCGUUGCAGCAAACAAUGCCCCUGAUGAGUGAAAAGAAUGAGUGAUGUCGCCGAGACACUAGAUCCUUUGCGCUUGCCCUUACAGGGUGAGCGCCUGAUUGAAGCCUCUGCC |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0135901 |
0.9496255 |
recB |
947286 |
exonuclease V (RecBCD complex) beta subunit |
b2823 |
42 |
60 |
42 |
48 |
6.85 |
RyhB |
40 |
58 |
52 |
58 |
3.21 |
-14.06 |
-24.12 |
-1.47837 |
GGAGGUAAUGUUGGCGAUG&CAUUGCUCACAUUGCUUCC |
(((((((((((..((((((&))))))..))))))))))) |
CGAAGUCAUUGAUGGAAACAUUGUUUUUUCGCCACGCGGCUGGAGCGAUUUUUGUCCGCUGAAAGAGAGGGCGUUAUGUCAGCUUCCCUGAAGAAUCAACAAGGCUUUAGCCUGCCGGAGGUAAUGUUGGCGAUGGUGUUGAUGGUGAUG |
GCGAUCAGGAAGACCCUCGCGGAGAACCUGAAAGCACGACAUUGCUCACAUUGCUUCCAGUAUUACUUAGCCAGCCGGGUGCUGGCUUUU |
0.0052703 |
0.9291058 |
ppdC |
945797 |
putative prepilin peptidase-dependent protein |