PA5070 |
13 |
29 |
23 |
29 |
3.11 |
PrrF1 |
104 |
121 |
104 |
110 |
2.23 |
-11.88 |
-17.22 |
-1.18469 |
AAACCCGAGCAGCCUGA&UCAGGCUAAUCACGGUUU |
(((((.((..(((((((&)))))))..))..))))) |
CGCGGACGCCGCGGCACCGCCGGCAGUCGCUGCCUCCACUCCCCCUUCGCCACCGUCCGAGACGCCGCGUAAUCCAUGAGCGCCGAUAAACCCGAGCAGCCUGAGCACGACCAGGAAAUGCCCCUGGUCUCGCACCUGACCGAACUGCGU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0167935 |
0.9556607 |
tatC |
879671 |
transporter TatC |
PA1196 |
36 |
55 |
47 |
53 |
7.22 |
PrrF1 |
103 |
121 |
105 |
111 |
2.23 |
-11.73 |
-21.18 |
-1.16973 |
AAGCGGUGAACUGGCCUGGU&AUCAGGCUAAUCACGGUUU |
((((.((((..(((((((((&))))))))).)))).)))) |
GGAUGCUCGGUCGCGCUGCGUCGAAGAUGGGACAACUGACGAGAUUUCGACAUCCGGGAAACCGAGGGGGAGAGCAUGGCGCUUGUCGAGGAACCGACGAUUUCCACGCGAAGCGGUGAACUGGCCUGGUUGGUGGACUGCCUGGCGCCG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0183269 |
0.9556607 |
|
878419 |
transcriptional regulator |
PA1838 |
-30 |
-7 |
-22 |
-16 |
7.27 |
PrrF1 |
98 |
121 |
105 |
111 |
2.24 |
-11.42 |
-20.93 |
-1.13882 |
AAGCCGCAUAGCCUGACAGCAGGA&UCCUCAUCAGGCUAAUCACGGUUU |
((((((..((((((((....((((&))))..))))))))....)))))) |
CCACUCCGCGUGGAGCGCGUAGCCGUGCGCGCUGGUUAACGCAGUAAGCCGCAUAGCCUGACAGCAGGAAUAUUCAUGUACGUAUACGACGAGUACGACCAACGGAUCGUCGAGGACCGCGUCAAGCAGUUCCGCGACCAGACCCGCCGU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0219074 |
0.9556607 |
cysI |
878581 |
sulfite reductase |
PA2509 |
8 |
29 |
9 |
15 |
4.78 |
PrrF1 |
104 |
121 |
114 |
120 |
2.23 |
-11.21 |
-18.22 |
-1.11788 |
AAGCCGUGAUCCAAAGCCUCGA&UCAGGCUAAUCACGGUUU |
((((((((((.....((((.((&))))))..)))))))))) |
ACCCGCUCGGUAUCGAGCGAGCCUUGAGCAGCGAACCGUCGAAAACCCGACCGCAACCCUGGUGGACCCCCGAGAAUGAGCCAAGCCGUGAUCCAAAGCCUCGAGUCGAUCAUCGUCGACCUGCCGACCAUCCGCCCGCACAAGCUGGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0246826 |
0.9556607 |
catB |
882968 |
muconate cycloisomerase I |
PA3618 |
-9 |
24 |
6 |
12 |
9.28 |
PrrF1 |
76 |
122 |
102 |
108 |
12.14 |
-13.93 |
-35.35 |
-1.38912 |
AGAACAGUGAUGACCCUGAUGGAGUCCGACCUG&CAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUU |
(((((.(((((...((((((((((((((((.((&)))))))))))...............)))))))...))))).))))) |
UCCGAAAGCUGCUUCUGAAUGGAAAAGCCGAUGGUGUAGGGUAGUCCCUUUCCGUUUCUACCCUGGAGAACAGUGAUGACCCUGAUGGAGUCCGACCUGACCGCACUGGCCGCCCGCCUCGGCGAAAGCCUUCGUUACCUGGGCGAGCAG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0047445 |
0.9364457 |
|
880187 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA0898 |
-56 |
-29 |
-41 |
-35 |
10.07 |
PrrF1 |
99 |
122 |
104 |
110 |
2.24 |
-12.8 |
-25.11 |
-1.27644 |
AGAAGCGCGGUUGAAAGCCUGAUGGAGG&CCUCAUCAGGCUAAUCACGGUUUU |
((((.((.((((...((((((((.((((&)))))))))))))))).)).)))) |
GCGGUGCCGCUGUCGGCGCAGAAGCGCGGUUGAAAGCCUGAUGGAGGCGUCCCGGCGAGGGCGCCCGAGGAGUCGAUGAUGAGUACCCAUUACAUUGCCGGCCAGUGGCUGGCGGGCCAGGGCGAGACCCUGGAGUCCCUCGACCCGGUU |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0096811 |
0.9556607 |
aruD |
883040 |
N-succinylglutamate 5-semialdehyde dehydrogenase |
PA1477 |
-23 |
7 |
-5 |
2 |
8.62 |
PrrF1 |
98 |
123 |
103 |
109 |
2.24 |
-12.15 |
-23.01 |
-1.21162 |
AAGAGCCCUGUAAACAGAGCCUGAUGAUGA&UCCUCAUCAGGCUAAUCACGGUUUUU |
(((((((.((.......((((((((((.((&)).))))))))))...)).))))))) |
GCCGCCCACGCUUGACCCGGGCUGGCAGCGGAAGGUCUGCCCGGUAUUUCCAAAGAGCCCUGUAAACAGAGCCUGAUGAUGAAUUGGACAUGGUUUCACAAGCUUGGGUCGCCCAAGUGGUUCUACGAGAUCAGCGGCCGCUGGCUGCCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0143251 |
0.9556607 |
ccmC |
881087 |
heme exporter protein CcmC |
PA4940 |
-60 |
-41 |
-47 |
-41 |
4.14 |
PrrF1 |
100 |
123 |
100 |
106 |
2.24 |
-11.51 |
-17.89 |
-1.1478 |
AGAAAUCGUGUUAUGAUGAG&CUCAUCAGGCUAAUCACGGUUUUU |
((((((((((((((((((((&)))))))...))).)))))))))) |
GGCAGCGCCCGCCGGAGAAAUCGUGUUAUGAUGAGCCAGCCGGGAAAUCCCGGCUUUUUUGCGUCCGCGAGAAUCAUGUGGCAGGAAUUCGGCAUCGCUUUUUGUCUCGUGCUGGUGCUGGAAGGCAUCCUGCCGUUCCUGUGUCCGCGA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0208073 |
0.9556607 |
|
878720 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA1581 |
6 |
21 |
9 |
15 |
6.22 |
PrrF1 |
108 |
123 |
114 |
120 |
2.17 |
-11.38 |
-19.77 |
-1.13483 |
AAAAGCCGUGAAUAGC&GCUAAUCACGGUUUUU |
(((((((((((.((((&)))).))))))))))) |
GUCGCCACUCCCUGGUGAUGGGUACCUGACAAGUGCACUUCCCGACAACUAGCCCUGUUCGUUAGGGCUCUCAGUGUGAAAAAAGCCGUGAAUAGCAAACGACCUGUAAACCUAGACCUAAGGACCAUCAAACUCCCUGUCACCGCUUAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.022413 |
0.9556607 |
sdhC |
881880 |
succinate dehydrogenase subunit C |
PA0918 |
-10 |
10 |
-5 |
2 |
5.89 |
PrrF1 |
104 |
123 |
112 |
118 |
2.24 |
-11.25 |
-19.38 |
-1.12187 |
AGGAACCGUGAUGAGCUGGA&UCAGGCUAAUCACGGUUUUU |
((((((((((((..((..((&))..))..)))))))))))) |
UUCAGCGGAGCCGCCGAGAAUACCGGCCGACCCGCCGCAGAGCGGGCUCCCGAGAGCCGAAGAGAAGGAACCGUGAUGAGCUGGAAAAACACCGAAUCCCGUUAUGGGAGCCUGACCAUUGCCCUGCACUGGCUGACCCUGCUGCUGAUC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0241306 |
0.9556607 |
|
878803 |
cytochrome b561 |