PA2528 |
-24 |
-7 |
-16 |
-10 |
3.03 |
PrrF1 |
101 |
118 |
104 |
110 |
2.24 |
-12.57 |
-17.84 |
-1.2535 |
CCGUUCUAAGCCUGAAGA&UCAUCAGGCUAAUCACGG |
((((....(((((((.((&)).)))))))....)))) |
GCUUUGCCUGGGCCCCUGCAAUGCUUAUCGUGCAGCCUGGAAAAAGCGCCUCCGUUCUAAGCCUGAAGAAGAACCAUGACUCCAACGACCGGUAAAUCCAAGUUCCGUACCCUGCGCCCGUGGCUGAUCACCGCCCUGGCCUUCGCCGCC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0111375 |
0.9556607 |
|
882937 |
resistance-nodulation-cell division (RND) efflux membrane fusion protein |
PA5012 |
-11 |
5 |
-7 |
-1 |
3.44 |
PrrF1 |
100 |
118 |
104 |
110 |
2.24 |
-12.32 |
-18 |
-1.22857 |
CCGGAGCCUGAAUGAG&CUCAUCAGGCUAAUCACGG |
(((.(((((((.((((&))))))))))).....))) |
UACCCUGGUCAAGUAAGCACCGAAGAAGGGUGUGACAGGGAGGCGAAAGCCUCCCUGAUCAUUUCCGGAGCCUGAAUGAGAAUUCUGAUCGUAGGUCCCUCCUGGGUGGGGGACAUGGUGAUGGCGCAGACCCUGUUCCAGUGUCUGCGC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.012946 |
0.9556607 |
waaF |
881422 |
heptosyltransferase II |
PA5206 |
-43 |
62 |
36 |
42 |
44.71 |
PrrF1 |
35 |
118 |
48 |
54 |
23.39 |
-12.8 |
-80.9 |
-1.27644 |
CCGCGAUAGGCCAUGAUGGGGCUCGAUCCGUGUGGAGAGUCCCAUGCCGUUGCCGUCUCUGAAAGACCAGUUCGGCGCGCUGAUCGCCGCGUCUUCCGUCAGUUG&CAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGG |
(((.(((..(((.((((((((...(((.....((((((((((..(((.((....((((((.......(((((...((.(((((((..((((........((((((&))))))..)))).)))))))))...)))))))))))..)))))...))))))))))....))).)))))))))))..))).))) |
GGCGGAACCGGAACGGACGGUUUUAUCCACUGCCGCGAUAGGCCAUGAUGGGGCUCGAUCCGUGUGGAGAGUCCCAUGCCGUUGCCGUCUCUGAAAGACCAGUUCGGCGCGCUGAUCGCCGCGUCUUCCGUCAGUUGCACCCAGCCCGAG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0096811 |
0.9556607 |
argE |
879575 |
acetylornithine deacetylase |
PA3216 |
-2 |
20 |
11 |
17 |
6.01 |
PrrF1 |
98 |
118 |
101 |
107 |
2.24 |
-11.35 |
-19.6 |
-1.13184 |
CCAUGAGCAGCCCUGAUGACGA&UCCUCAUCAGGCUAAUCACGG |
((.(((..(((.(((((((.((&)).))))))))))..))).)) |
ACUGGCCCUGUAUGUCAUCCGCGACAUCGUGCGGCCCGCACUACACUGCGCGGACACAACGAGAGGAGGCAUUCCAUGAGCAGCCCUGAUGACGAGCGUUUCCACAGUUUCGCCGAGUUCUACCCCUACUACCUGCAGGAACACAGCAAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0227992 |
0.9556607 |
|
882542 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA1336 |
43 |
53 |
43 |
49 |
2.27 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-11.82 |
-16.32 |
-1.17871 |
ACCGUGAAGCC&GGCUAAUCACGGU |
(((((((((((&))))..))))))) |
CUGCCGGCCGUGCCGGAAAACCGCCCGCUCCGCCGCCCAUCGUGGCGGCGGGCUGGCCUAGCCGCGACGACUGUGAUGGAAUCCCCCGACCCGCCCUGCAGCGUACCUCCGUCACUGACCGUGAAGCCCCGCCUCGUCCGCCAGUUGCUG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0173922 |
0.9556607 |
|
879303 |
two-component sensor |
PA4756 |
52 |
64 |
52 |
58 |
4.34 |
PrrF1 |
107 |
119 |
113 |
119 |
2.23 |
-14.73 |
-21.3 |
-1.4689 |
AUCGUGAUUGGCC&GGCUAAUCACGGU |
(((((((((((((&))))))))))))) |
UCGGCGCCCUGUUCGUCGGCUUUGGUGUGAAGCUGGCCACCGCAACCCUGUCCUGAUUAUUGCAACGAGAGUCCCAUGCCAAAACGUACAGACAUAAAGAGCAUCCUGAUCCUCGGUGCCGGCCCCAUCGUGAUUGGCCAGGCCUGCGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0027896 |
0.6954913 |
carB |
881743 |
carbamoyl phosphate synthase large subunit |
PA4656 |
25 |
38 |
29 |
35 |
5.43 |
PrrF1 |
100 |
119 |
103 |
109 |
2.24 |
-12.22 |
-19.89 |
-1.2186 |
ACCGGCCUGAUGGG&CUCAUCAGGCUAAUCACGGU |
((((((((((((((&))))))))))......)))) |
GAUGCACGGUCAUCGGGCAGAUCGAUGUCCAGGGUCCAGACUGAAAGGGCACGCAGGCAAAACGAGGAGACAGCCAUGCACAUUCUCUUGACCGGCGGUACCGGCCUGAUGGGUCGCCGCCUGUGCGCCCGCUGGCGACAGGCCGGACAC |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0137418 |
0.9556607 |
|
881319 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |
PA2953 |
-28 |
-6 |
-28 |
-22 |
8.3 |
PrrF1 |
95 |
119 |
113 |
119 |
5.83 |
-13.48 |
-27.61 |
-1.34425 |
ACCGUGAGCCUUGAGUAGGAGAU&AUCUCCUCAUCAGGCUAAUCACGGU |
(((((((((((.((..(((((((&)))))))..))))))...))))))) |
UGCGCCCGCUCUGAUCAGGGAAAGAUCUCAGCCACCAAUAAACAGAUACCGUGAGCCUUGAGUAGGAGAUCGAUAGUGGAACGCGAAUACAUGGAAUUCGACGUCGUCAUCGUCGGCGCCGGCCCCGCCGGUCUGUCCGCCGCAUGCCGA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0063346 |
0.9377188 |
|
880159 |
electron transfer flavoprotein-ubiquinone oxidoreductase |
PA3504 |
-3 |
12 |
-3 |
4 |
5.91 |
PrrF1 |
105 |
119 |
113 |
119 |
2.23 |
-11.44 |
-19.58 |
-1.14082 |
ACCGUGAUUGACCUG&CAGGCUAAUCACGGU |
(((((((((..((((&))))..))))))))) |
GGCGCUGACCGUGUACAGCGUGGUCCGAGCGUUGGGCAACCACGCCCACGCGAUUUCGAUCUAGGGACGACUACCGUGAUUGACCUGAACCCGAUCCAACCCAUCUGCAUCGCCGGCGAGUGGCGAGCGGGCGGCGGCGACCUCUACGAA |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0216584 |
0.9556607 |
|
879169 |
aldehyde dehydrogenase |
PA0882 |
40 |
54 |
41 |
47 |
7.55 |
PrrF1 |
105 |
119 |
112 |
118 |
2.23 |
-13.68 |
-23.46 |
-1.36419 |
ACCGUGGUCAGCCUG&CAGGCUAAUCACGGU |
((((((((.((((((&)))))).)))))))) |
CCGUAGCGCCGCUGAUCUGAUCAACCGAACCAGCCGCACCUCGUCUUCGACGGACGAGGGCAGGGAGUCCGACCCAUGACACAAUCCCACCGACCGCGCCCGCUCGACGGCAUCACCGUGGUCAGCCUGGAGCACGCCAUCGCCGCGCCG |
UUGACAUGGAAAUGAGAAUCAUUAUUAUGUCACUCAACUGGUCGCGAGAUCAGCCGGUAAGCUGAGAGACCCACGCAGUCGGACUCUUCAGAUUAUCUCCUCAUCAGGCUAAUCACGGUUUUUGACCCGGCACUUUGCCGGGUCUUUUUUU |
0.0055756 |
0.9377188 |
|
880849 |
'Product name confidence: class 4 (Homologs of previously reported genes of unknown function or no similarity to any previously reported sequences)' |